RNA–Protein interactions for RNA: YDR126W

SWF1, Transcript of Palmitoyltransferase that acts on transmembrane proteins, yeast

Gene SWF1, Length 1,011 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWF1	YDR126W	MSS2	P40990	351 aa		0.64	□□□□□ -2.31
SWF1	YDR126W	SNZ3	P43545	298 aa		0.64	□□□□□ -2.31
SWF1	YDR126W	FAR7	P43592	221 aa		0.64	□□□□□ -2.31
SWF1	YDR126W	GLG2	P47011	380 aa		0.64	□□□□□ -2.31
SWF1	YDR126W	YGL034C	P53186	121 aa		0.64	□□□□□ -2.31
SWF1	YDR126W	SNZ2	P53824	298 aa		0.64	□□□□□ -2.31
SWF1	YDR126W	CUS2	P53830	285 aa	Predicted RBP	0.64	□□□□□ -2.31
SWF1	YDR126W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	0.64	□□□□□ -2.31	not detected
SWF1	YDR126W	YPR172W	Q06608	200 aa		0.64	□□□□□ -2.31
SWF1	YDR126W	AKR2	Q12013	749 aa		0.64	□□□□□ -2.31
SWF1	YDR126W	MDM32	Q12171	622 aa		0.64	□□□□□ -2.31
SWF1	YDR126W	USB1	Q12208	290 aa	Known RBP	0.64	□□□□□ -2.31
SWF1	YDR126W	YOR029W	Q12243	111 aa		0.64	□□□□□ -2.31
SWF1	YDR126W	TPO4	Q12256	659 aa		0.64	□□□□□ -2.31
SWF1	YDR126W	JLP1	Q12358	412 aa		0.64	□□□□□ -2.31
SWF1	YDR126W	FKS1	P38631	1876 aa	Known RBP	0.63	□□□□□ -2.31
SWF1	YDR126W	Q0255	P03881	472 aa		0.63	□□□□□ -2.31
SWF1	YDR126W	RPL25	P04456	142 aa	Known RBP	0.63	□□□□□ -2.31
SWF1	YDR126W	MSW1	P04803	379 aa		0.63	□□□□□ -2.31
SWF1	YDR126W	RPL27A	P0C2H6	136 aa	Known RBP	0.63	□□□□□ -2.31
SWF1	YDR126W	RPL27B	P0C2H7	136 aa	Known RBP	0.63	□□□□□ -2.31
SWF1	YDR126W	DSF1	P0CX08	502 aa		0.63	□□□□□ -2.31
SWF1	YDR126W	YNR073C	P0CX09	502 aa		0.63	□□□□□ -2.31
SWF1	YDR126W	URA6	P15700	204 aa		0.63	□□□□□ -2.31
SWF1	YDR126W	ERD2	P18414	219 aa		0.63	□□□□□ -2.31
SWF1	YDR126W	YMR31	P19955	123 aa		0.63	□□□□□ -2.31
SWF1	YDR126W	FPR1	P20081	114 aa	Known RBP	0.63	□□□□□ -2.31
SWF1	YDR126W	RPO26	P20435	155 aa		0.63	□□□□□ -2.31
SWF1	YDR126W	MRPS28	P21771	286 aa		0.63	□□□□□ -2.31
SWF1	YDR126W	MAG1	P22134	296 aa	Known RBP	0.63	□□□□□ -2.31
SWF1	YDR126W	ATG22	P25568	528 aa		0.63	□□□□□ -2.31
SWF1	YDR126W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	0.63	□□□□□ -2.31	not detected
SWF1	YDR126W	ERG24	P32462	438 aa	Known RBP	0.63	□□□□□ -2.31
SWF1	YDR126W	APS1	P35181	156 aa		0.63	□□□□□ -2.31
SWF1	YDR126W	YKT6	P36015	200 aa	Known RBP	0.63	□□□□□ -2.31
SWF1	YDR126W	MRPL28	P36527	147 aa		0.63	□□□□□ -2.31
SWF1	YDR126W	RIB1	P38066	345 aa		0.63	□□□□□ -2.31
SWF1	YDR126W	YBR063C	P38083	404 aa		0.63	□□□□□ -2.31
SWF1	YDR126W	DOG2	P38773	246 aa		0.63	□□□□□ -2.31
SWF1	YDR126W	RPF1	P38805	295 aa	Known RBP	0.63	□□□□□ -2.31
SWF1	YDR126W	RMD6	P39975	231 aa		0.63	□□□□□ -2.31
SWF1	YDR126W	RFC4	P40339	323 aa	Known RBP	0.63	□□□□□ -2.31
SWF1	YDR126W	YIL001W	P40560	513 aa		0.63	□□□□□ -2.31
SWF1	YDR126W	BXI1	P48558	297 aa		0.63	□□□□□ -2.31
SWF1	YDR126W	ERG25	P53045	309 aa		0.63	□□□□□ -2.31
SWF1	YDR126W	YGL159W	P53110	370 aa		0.63	□□□□□ -2.31
SWF1	YDR126W	GET1	P53192	235 aa		0.63	□□□□□ -2.31
SWF1	YDR126W	YGR219W	P53307	113 aa		0.63	□□□□□ -2.31
SWF1	YDR126W	GIM3	P53900	129 aa		0.63	□□□□□ -2.31
SWF1	YDR126W	GRX5	Q02784	150 aa		0.63	□□□□□ -2.31
SWF1	YDR126W	RSM10	Q03201	203 aa		0.63	□□□□□ -2.31
SWF1	YDR126W	YDR248C	Q03786	193 aa		0.63	□□□□□ -2.31
SWF1	YDR126W	FUS2	Q05670	677 aa		0.63	□□□□□ -2.31
SWF1	YDR126W	ATG39	Q06159	398 aa		0.63	□□□□□ -2.31
SWF1	YDR126W	GGA1	Q06336	557 aa		0.63	□□□□□ -2.31
SWF1	YDR126W	YET3	Q07451	203 aa		0.63	□□□□□ -2.31
SWF1	YDR126W	ABP140	Q08641	628 aa	Known RBP	0.63	□□□□□ -2.31
SWF1	YDR126W	YRA1	Q12159	226 aa	Known RBP	0.63	□□□□□ -2.31
SWF1	YDR126W	YLR126C	Q12288	251 aa		0.63	□□□□□ -2.31
SWF1	YDR126W	BBP1	Q12365	385 aa		0.63	□□□□□ -2.31
SWF1	YDR126W	YDL085C-A	Q3E7B7	68 aa	Known RBP	0.63	□□□□□ -2.31
SWF1	YDR126W	CFT1	Q06632	1357 aa	Known RBP	0.62	□□□□□ -2.31
SWF1	YDR126W	JIP3	O13555	125 aa		0.62	□□□□□ -2.31
SWF1	YDR126W	CDC8	P00572	216 aa		0.62	□□□□□ -2.31
SWF1	YDR126W	RHO1	P06780	209 aa	Known RBP	0.62	□□□□□ -2.31
SWF1	YDR126W	URA5	P13298	226 aa	Known RBP	0.62	□□□□□ -2.31
SWF1	YDR126W	GCN3	P14741	305 aa		0.62	□□□□□ -2.31
SWF1	YDR126W	FCY2	P17064	533 aa		0.62	□□□□□ -2.31
SWF1	YDR126W	RPS5	P26783	225 aa	Known RBP	0.62	□□□□□ -2.31
SWF1	YDR126W	PTM1	P32857	523 aa		0.62	□□□□□ -2.31
SWF1	YDR126W	RPT5	P33297	434 aa	Known RBP	0.62	□□□□□ -2.31
SWF1	YDR126W	SNC2	P33328	115 aa		0.62	□□□□□ -2.31
SWF1	YDR126W	PRP18	P33411	251 aa	Predicted RBP	0.62	□□□□□ -2.31
SWF1	YDR126W	CAF4	P36130	643 aa		0.62	□□□□□ -2.31
SWF1	YDR126W	POP4	P38336	279 aa		0.62	□□□□□ -2.31
SWF1	YDR126W	SIP3	P38717	1229 aa		0.62	□□□□□ -2.31
SWF1	YDR126W	YHR125W	P38831	101 aa		0.62	□□□□□ -2.31
SWF1	YDR126W	SVP26	P38869	228 aa		0.62	□□□□□ -2.31
SWF1	YDR126W	IKI1	P38874	309 aa		0.62	□□□□□ -2.31
SWF1	YDR126W	AIM2	P39721	246 aa		0.62	□□□□□ -2.31
SWF1	YDR126W	AST2	P39945	430 aa	Known RBP	0.62	□□□□□ -2.31
SWF1	YDR126W	HMF1	P40037	129 aa	Known RBP	0.62	□□□□□ -2.31
SWF1	YDR126W	YKE4	P40544	346 aa		0.62	□□□□□ -2.31
SWF1	YDR126W	CAT5	P41735	233 aa		0.62	□□□□□ -2.31
SWF1	YDR126W	TMA22	P47089	198 aa	Predicted RBP	0.62	□□□□□ -2.31
SWF1	YDR126W	YJR149W	P47177	404 aa		0.62	□□□□□ -2.31
SWF1	YDR126W	RAD17	P48581	401 aa		0.62	□□□□□ -2.31
SWF1	YDR126W	TRM9	P49957	279 aa		0.62	□□□□□ -2.31
SWF1	YDR126W	PDR17	P53844	350 aa		0.62	□□□□□ -2.31
SWF1	YDR126W	RTC4	P53850	401 aa		0.62	□□□□□ -2.31
SWF1	YDR126W	YNL046W	P53956	172 aa		0.62	□□□□□ -2.31
SWF1	YDR126W	TIM11	P81449	96 aa	Predicted RBP	0.62	□□□□□ -2.31
SWF1	YDR126W	SNZ1	Q03148	297 aa		0.62	□□□□□ -2.31
SWF1	YDR126W	EMI1	Q04406	187 aa		0.62	□□□□□ -2.31
SWF1	YDR126W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	0.62	□□□□□ -2.31	not detected
SWF1	YDR126W	YLR030W	Q07967	263 aa		0.62	□□□□□ -2.31
SWF1	YDR126W	GET4	Q12125	312 aa		0.62	□□□□□ -2.31
SWF1	YDR126W	YPR011C	Q12251	326 aa		0.62	□□□□□ -2.31
SWF1	YDR126W	ADF1	Q2V2Q1	113 aa		0.62	□□□□□ -2.31
SWF1	YDR126W	TSC3	Q3E790	80 aa		0.62	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 93.4 ms