RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C PDR17P53844 350 aa2.78□□□□□ -1.96
SHU2YDR078C DID2P69771 204 aa2.78□□□□□ -1.96
SHU2YDR078C ABF2Q02486 183 aa2.78□□□□□ -1.96
SHU2YDR078C TLG1Q03322 224 aa2.78□□□□□ -1.96
SHU2YDR078C YDR248CQ03786 193 aa2.78□□□□□ -1.96
SHU2YDR078C PEX12Q04370 399 aa2.78□□□□□ -1.96
SHU2YDR078C GRH1Q04410 372 aaKnown RBP2.78□□□□□ -1.96
SHU2YDR078C YML096WQ04489 525 aa2.78□□□□□ -1.96
SHU2YDR078C YOR020W-AQ3E824 90 aa2.78□□□□□ -1.96
SHU2YDR078C QCR7P00128 127 aa2.77□□□□□ -1.97
SHU2YDR078C RPL27AP0C2H6 136 aaKnown RBP2.77□□□□□ -1.97
SHU2YDR078C RPL27BP0C2H7 136 aaKnown RBP2.77□□□□□ -1.97
SHU2YDR078C DPM1P14020 267 aaKnown RBP2.77□□□□□ -1.97
SHU2YDR078C OAC1P32332 324 aa2.77□□□□□ -1.97
SHU2YDR078C APS1P35181 156 aa2.77□□□□□ -1.97
SHU2YDR078C YCR087C-AP37263 153 aa2.77□□□□□ -1.97
SHU2YDR078C BMT5P40493 336 aa2.77□□□□□ -1.97
SHU2YDR078C ARC15P40518 154 aaRIP-Chip data2.77□□□□□ -1.97not detected
SHU2YDR078C FAR7P43592 221 aa2.77□□□□□ -1.97
SHU2YDR078C YJR056CP47115 236 aa2.77□□□□□ -1.97
SHU2YDR078C NOP19P53317 196 aaPredicted RBP2.77□□□□□ -1.97
SHU2YDR078C CAB4P53332 305 aa2.77□□□□□ -1.97
SHU2YDR078C SPS18P32572 300 aa2.76□□□□□ -1.97
SHU2YDR078C SDH4P37298 181 aa2.76□□□□□ -1.97
SHU2YDR078C YHR125WP38831 101 aa2.76□□□□□ -1.97
SHU2YDR078C COG3P40094 801 aa2.76□□□□□ -1.97
SHU2YDR078C FIS1P40515 155 aa2.76□□□□□ -1.97
SHU2YDR078C YRB2P40517 327 aa2.76□□□□□ -1.97
SHU2YDR078C YJL144WP47009 104 aa2.76□□□□□ -1.97
SHU2YDR078C YJL016WP47072 561 aa2.76□□□□□ -1.97
SHU2YDR078C PRM8P53174 237 aa2.76□□□□□ -1.97
SHU2YDR078C SSU72P53538 206 aaPredicted RBP2.76□□□□□ -1.97
SHU2YDR078C SNZ1Q03148 297 aa2.76□□□□□ -1.97
SHU2YDR078C SAS5Q99314 248 aa2.76□□□□□ -1.97
SHU2YDR078C RAD9P14737 1309 aa2.75□□□□□ -1.97
SHU2YDR078C Q0255P03881 472 aa2.75□□□□□ -1.97
SHU2YDR078C ADH3P07246 375 aaKnown RBP2.75□□□□□ -1.97
SHU2YDR078C APA2P22108 325 aa2.75□□□□□ -1.97
SHU2YDR078C ASF2P32448 525 aaPredicted RBP2.75□□□□□ -1.97
SHU2YDR078C YAR068WP39564 161 aa2.75□□□□□ -1.97
SHU2YDR078C YMR279CQ03263 540 aa2.75□□□□□ -1.97
SHU2YDR078C YPR096CO13587 100 aa2.74□□□□□ -1.97
SHU2YDR078C GCN3P14741 305 aa2.74□□□□□ -1.97
SHU2YDR078C FCY2P17064 533 aa2.74□□□□□ -1.97
SHU2YDR078C ADE1P27616 306 aa2.74□□□□□ -1.97
SHU2YDR078C YKR032WP36127 104 aa2.74□□□□□ -1.97
SHU2YDR078C ECM33P38248 429 aaKnown RBP2.74□□□□□ -1.97
SHU2YDR078C DOG2P38773 246 aa2.74□□□□□ -1.97
SHU2YDR078C DOG1P38774 246 aa2.74□□□□□ -1.97
SHU2YDR078C IRC22P40006 225 aa2.74□□□□□ -1.97
SHU2YDR078C YER188WP40103 239 aa2.74□□□□□ -1.97
SHU2YDR078C RSM25P40496 264 aa2.74□□□□□ -1.97
SHU2YDR078C YMD8Q03697 442 aa2.74□□□□□ -1.97
SHU2YDR078C ATG39Q06159 398 aa2.74□□□□□ -1.97
SHU2YDR078C CCH1P50077 2039 aa2.74□□□□□ -1.97
SHU2YDR078C RPL26AP05743 127 aaKnown RBP2.73□□□□□ -1.97
SHU2YDR078C SEC4P07560 215 aaKnown RBP2.73□□□□□ -1.97
SHU2YDR078C CCA1P21269 546 aa2.73□□□□□ -1.97
SHU2YDR078C TCA17P32613 152 aa2.73□□□□□ -1.97
SHU2YDR078C YBR063CP38083 404 aa2.73□□□□□ -1.97
SHU2YDR078C GRE3P38715 327 aaKnown RBP RIP-Chip data2.73□□□□□ -1.97not detected
SHU2YDR078C SMD3P43321 101 aaKnown RBP2.73□□□□□ -1.97
SHU2YDR078C RPL26BP53221 127 aaKnown RBP2.73□□□□□ -1.97
SHU2YDR078C CLP1Q08685 445 aaPredicted RBP2.73□□□□□ -1.97
SHU2YDR078C YHR032W-AP0C5N6 59 aa2.72□□□□□ -1.97
SHU2YDR078C MER1P16523 270 aa2.72□□□□□ -1.97
SHU2YDR078C TRM5P38793 499 aa2.72□□□□□ -1.97
SHU2YDR078C CTR2P38865 189 aa2.72□□□□□ -1.97
SHU2YDR078C YGR026WP53217 278 aa2.72□□□□□ -1.97
SHU2YDR078C YNL010WP53981 241 aaKnown RBP2.72□□□□□ -1.97
SHU2YDR078C LPP1Q04396 274 aa2.72□□□□□ -1.97
SHU2YDR078C YPR170W-BP0C5R9 85 aa2.71□□□□□ -1.98
SHU2YDR078C MRPL28P36527 147 aa2.71□□□□□ -1.98
SHU2YDR078C AKR2Q12013 749 aa2.71□□□□□ -1.98
SHU2YDR078C SCM4P32564 187 aa2.7□□□□□ -1.98
SHU2YDR078C YJR146WP47174 117 aa2.7□□□□□ -1.98
SHU2YDR078C MMS2P53152 137 aa2.7□□□□□ -1.98
SHU2YDR078C PET191Q02772 108 aa2.7□□□□□ -1.98
SHU2YDR078C HRT1Q08273 121 aa2.7□□□□□ -1.98
SHU2YDR078C RPL9AP05738 191 aaKnown RBP2.69□□□□□ -1.98
SHU2YDR078C GRX2P17695 143 aaKnown RBP2.69□□□□□ -1.98
SHU2YDR078C ATG22P25568 528 aa2.69□□□□□ -1.98
SHU2YDR078C YHL026CP38740 315 aa2.69□□□□□ -1.98
SHU2YDR078C MRPL49P40858 161 aaPredicted RBP2.69□□□□□ -1.98
SHU2YDR078C RPL9BP51401 191 aaKnown RBP2.69□□□□□ -1.98
SHU2YDR078C LSM7P53905 115 aaKnown RBP2.69□□□□□ -1.98
SHU2YDR078C TDA8Q6B2U8 126 aa2.69□□□□□ -1.98
SHU2YDR078C CDC7P06243 507 aa2.68□□□□□ -1.98
SHU2YDR078C SCO1P23833 295 aa2.68□□□□□ -1.98
SHU2YDR078C ATP7P30902 174 aa2.68□□□□□ -1.98
SHU2YDR078C POP4P38336 279 aa2.68□□□□□ -1.98
SHU2YDR078C HOP2P53187 214 aa2.68□□□□□ -1.98
SHU2YDR078C YGR050CP53231 118 aa2.68□□□□□ -1.98
SHU2YDR078C MDM32Q12171 622 aa2.68□□□□□ -1.98
SHU2YDR078C PSF1Q12488 208 aa2.68□□□□□ -1.98
SHU2YDR078C VMA11P32842 164 aa2.67□□□□□ -1.98
SHU2YDR078C PTM1P32857 523 aa2.67□□□□□ -1.98
SHU2YDR078C RMD6P39975 231 aa2.67□□□□□ -1.98
SHU2YDR078C YIL001WP40560 513 aa2.67□□□□□ -1.98
SHU2YDR078C SNX4P47057 423 aa2.67□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 44.8 ms