RNA–Protein interactions for RNA: YDL088C

ASM4, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene ASM4, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ASM4YDL088C SHG1P38337 142 aa1.31□□□□□ -2.2
ASM4YDL088C ARN2P38724 620 aa1.31□□□□□ -2.2
ASM4YDL088C POG1P40473 351 aa1.31□□□□□ -2.2
ASM4YDL088C ERG10P41338 398 aaKnown RBP1.31□□□□□ -2.2
ASM4YDL088C SYS1P41544 203 aa1.31□□□□□ -2.2
ASM4YDL088C FAR7P43592 221 aa1.31□□□□□ -2.2
ASM4YDL088C PIR5P46999 287 aa1.31□□□□□ -2.2
ASM4YDL088C BXI1P48558 297 aa1.31□□□□□ -2.2
ASM4YDL088C ALG13P53178 202 aa1.31□□□□□ -2.2
ASM4YDL088C PDR17P53844 350 aa1.31□□□□□ -2.2
ASM4YDL088C ABF2Q02486 183 aa1.31□□□□□ -2.2
ASM4YDL088C CGI121Q03705 181 aaKnown RBP1.31□□□□□ -2.2
ASM4YDL088C YDR248CQ03786 193 aa1.31□□□□□ -2.2
ASM4YDL088C INM2Q05533 292 aa1.31□□□□□ -2.2
ASM4YDL088C FUS2Q05670 677 aa1.31□□□□□ -2.2
ASM4YDL088C SUE1Q06524 206 aa1.31□□□□□ -2.2
ASM4YDL088C YBL008W-AQ3E821 79 aa1.31□□□□□ -2.2
ASM4YDL088C ISD11Q6Q560 94 aa1.31□□□□□ -2.2
ASM4YDL088C NUP157P40064 1391 aaKnown RBP1.31□□□□□ -2.2
ASM4YDL088C COX5AP00424 153 aa1.3□□□□□ -2.2
ASM4YDL088C ADH3P07246 375 aaKnown RBP1.3□□□□□ -2.2
ASM4YDL088C SEC4P07560 215 aaKnown RBP1.3□□□□□ -2.2
ASM4YDL088C SEC22P22214 214 aa1.3□□□□□ -2.2
ASM4YDL088C TRR1P29509 319 aaKnown RBP1.3□□□□□ -2.2
ASM4YDL088C SRY1P36007 326 aa1.3□□□□□ -2.2
ASM4YDL088C MRPL28P36527 147 aa1.3□□□□□ -2.2
ASM4YDL088C TRM7P38238 310 aaKnown RBP1.3□□□□□ -2.2
ASM4YDL088C FES1P38260 290 aa1.3□□□□□ -2.2
ASM4YDL088C GRE3P38715 327 aaKnown RBP RIP-Chip data1.3□□□□□ -2.2not detected
ASM4YDL088C YER189WP40104 122 aa1.3□□□□□ -2.2
ASM4YDL088C YJL016WP47072 561 aa1.3□□□□□ -2.2
ASM4YDL088C YPL150WQ12152 901 aa1.3□□□□□ -2.2
ASM4YDL088C ATG5Q12380 294 aa1.3□□□□□ -2.2
ASM4YDL088C EMP46Q12396 444 aa1.3□□□□□ -2.2
ASM4YDL088C YLR462WO13556 202 aa1.3□□□□□ -2.2
ASM4YDL088C HIS3P06633 220 aa1.3□□□□□ -2.2
ASM4YDL088C GCN3P14741 305 aa1.3□□□□□ -2.2
ASM4YDL088C MAG1P22134 296 aaKnown RBP1.3□□□□□ -2.2
ASM4YDL088C TCA17P32613 152 aa1.3□□□□□ -2.2
ASM4YDL088C NRG2P38082 220 aa1.3□□□□□ -2.2
ASM4YDL088C MTW1P39731 289 aa1.3□□□□□ -2.2
ASM4YDL088C YEL075CP39972 122 aa1.3□□□□□ -2.2
ASM4YDL088C YJL028WP47062 111 aa1.3□□□□□ -2.2
ASM4YDL088C YJR056CP47115 236 aa1.3□□□□□ -2.2
ASM4YDL088C YGL034CP53186 121 aa1.3□□□□□ -2.2
ASM4YDL088C ERV29P53337 310 aa1.3□□□□□ -2.2
ASM4YDL088C YPL039WQ03080 316 aa1.3□□□□□ -2.2
ASM4YDL088C EMI1Q04406 187 aa1.3□□□□□ -2.2
ASM4YDL088C GRH1Q04410 372 aaKnown RBP1.3□□□□□ -2.2
ASM4YDL088C YML096WQ04489 525 aa1.3□□□□□ -2.2
ASM4YDL088C SLD7Q08457 257 aa1.3□□□□□ -2.2
ASM4YDL088C YPL247CQ12523 523 aa1.3□□□□□ -2.2
ASM4YDL088C YPL229WQ99395 206 aa1.3□□□□□ -2.2
ASM4YDL088C IKI3Q06706 1349 aaKnown RBP1.29□□□□□ -2.2
ASM4YDL088C CDC28P00546 298 aaKnown RBP1.29□□□□□ -2.2
ASM4YDL088C IPP1P00817 287 aaKnown RBP1.29□□□□□ -2.2
ASM4YDL088C RPL25P04456 142 aaKnown RBP1.29□□□□□ -2.2
ASM4YDL088C DBF2P22204 572 aa1.29□□□□□ -2.2
ASM4YDL088C MGT1P26188 188 aa1.29□□□□□ -2.2
ASM4YDL088C RNP1P32385 249 aa1.29□□□□□ -2.2
ASM4YDL088C SPS18P32572 300 aa1.29□□□□□ -2.2
ASM4YDL088C MAK5P38112 773 aaPredicted RBP1.29□□□□□ -2.2
ASM4YDL088C ECM33P38248 429 aaKnown RBP1.29□□□□□ -2.2
ASM4YDL088C SPL2P38839 148 aa1.29□□□□□ -2.2
ASM4YDL088C COG3P40094 801 aa1.29□□□□□ -2.2
ASM4YDL088C PDS1P40316 373 aaPredicted RBP1.29□□□□□ -2.2
ASM4YDL088C CAT5P41735 233 aa1.29□□□□□ -2.2
ASM4YDL088C TMA22P47089 198 aaPredicted RBP1.29□□□□□ -2.2
ASM4YDL088C DAN1P47178 298 aa1.29□□□□□ -2.2
ASM4YDL088C YGL159WP53110 370 aa1.29□□□□□ -2.2
ASM4YDL088C JAC1P53193 184 aa1.29□□□□□ -2.2
ASM4YDL088C YLR460CP54007 376 aa1.29□□□□□ -2.2
ASM4YDL088C PRM15Q03262 622 aa1.29□□□□□ -2.2
ASM4YDL088C YLR036CQ07986 203 aa1.29□□□□□ -2.2
ASM4YDL088C VPS68Q12016 184 aa1.29□□□□□ -2.2
ASM4YDL088C YPR011CQ12251 326 aa1.29□□□□□ -2.2
ASM4YDL088C PST1Q12355 444 aa1.29□□□□□ -2.2
ASM4YDL088C AGC1Q12482 902 aa1.29□□□□□ -2.2
ASM4YDL088C YDL085C-AQ3E7B7 68 aaKnown RBP1.29□□□□□ -2.2
ASM4YDL088C YOR020W-AQ3E824 90 aa1.29□□□□□ -2.2
ASM4YDL088C HTL1Q9URQ5 78 aa1.29□□□□□ -2.2
ASM4YDL088C PAN1P32521 1480 aa1.28□□□□□ -2.2
ASM4YDL088C MRS1P07266 363 aa1.28□□□□□ -2.2
ASM4YDL088C GCY1P14065 312 aaKnown RBP RIP-Chip data1.28□□□□□ -2.2not detected
ASM4YDL088C UBC6P33296 250 aaPredicted RBP1.28□□□□□ -2.2
ASM4YDL088C COS8P38723 381 aa1.28□□□□□ -2.2
ASM4YDL088C DOG2P38773 246 aa1.28□□□□□ -2.2
ASM4YDL088C DOG1P38774 246 aa1.28□□□□□ -2.2
ASM4YDL088C HMF1P40037 129 aaKnown RBP1.28□□□□□ -2.2
ASM4YDL088C RPA43P46669 326 aa1.28□□□□□ -2.2
ASM4YDL088C GTR2P53290 341 aa1.28□□□□□ -2.2
ASM4YDL088C LSM7P53905 115 aaKnown RBP1.28□□□□□ -2.2
ASM4YDL088C NRK1P53915 240 aa1.28□□□□□ -2.2
ASM4YDL088C YNL010WP53981 241 aaKnown RBP1.28□□□□□ -2.2
ASM4YDL088C YMD8Q03697 442 aa1.28□□□□□ -2.2
ASM4YDL088C NOC4Q06512 552 aaPredicted RBP1.28□□□□□ -2.2
ASM4YDL088C MSA1Q08471 629 aa1.28□□□□□ -2.2
ASM4YDL088C MDM32Q12171 622 aa1.28□□□□□ -2.2
ASM4YDL088C USB1Q12208 290 aaKnown RBP1.28□□□□□ -2.2
ASM4YDL088C YBL112CQ3E7Y4 105 aa1.28□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 75.4 ms