RNA–Protein interactions for RNA: YCL055W

KAR4, Transcript of Transcription factor required for response to pheromones, yeastyeast

Gene KAR4, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KAR4YCL055W RUD3Q12234 484 aaKnown RBP2.34□□□□□ -2.03
KAR4YCL055W YCL012CQ8J0M4 134 aa2.34□□□□□ -2.03
KAR4YCL055W TDH1P00360 332 aaKnown RBP2.33□□□□□ -2.04
KAR4YCL055W SPT3P06844 337 aa2.33□□□□□ -2.04
KAR4YCL055W RPS23AP0CX29 145 aaKnown RBP2.33□□□□□ -2.04
KAR4YCL055W RPS23BP0CX30 145 aa2.33□□□□□ -2.04
KAR4YCL055W PRE7P23724 241 aaKnown RBP2.33□□□□□ -2.04
KAR4YCL055W ADE1P27616 306 aa2.33□□□□□ -2.04
KAR4YCL055W PPQ1P32945 549 aa2.33□□□□□ -2.04
KAR4YCL055W HSM3P38348 480 aa2.33□□□□□ -2.04
KAR4YCL055W PEX18P38855 283 aa2.33□□□□□ -2.04
KAR4YCL055W AVT7P40501 490 aa2.33□□□□□ -2.04
KAR4YCL055W RPL10P41805 221 aaKnown RBP2.33□□□□□ -2.04
KAR4YCL055W FMP32P43557 207 aa2.33□□□□□ -2.04
KAR4YCL055W IBA57P47158 497 aa2.33□□□□□ -2.04
KAR4YCL055W MDM34P53083 459 aa2.33□□□□□ -2.04
KAR4YCL055W TPN1P53099 579 aa2.33□□□□□ -2.04
KAR4YCL055W MRS2Q01926 470 aa2.33□□□□□ -2.04
KAR4YCL055W YLR030WQ07967 263 aa2.33□□□□□ -2.04
KAR4YCL055W YOL107WQ12239 342 aa2.33□□□□□ -2.04
KAR4YCL055W YPS3Q12303 508 aa2.33□□□□□ -2.04
KAR4YCL055W IES3Q12345 250 aa2.33□□□□□ -2.04
KAR4YCL055W NOT5Q12514 560 aaPredicted RBP2.33□□□□□ -2.04
KAR4YCL055W BCY1P07278 416 aaKnown RBP2.32□□□□□ -2.04
KAR4YCL055W TAH1P25638 111 aaPredicted RBP2.32□□□□□ -2.04
KAR4YCL055W RPC19P28000 142 aaKnown RBP2.32□□□□□ -2.04
KAR4YCL055W SUA5P32579 426 aa2.32□□□□□ -2.04
KAR4YCL055W SEC17P32602 292 aa2.32□□□□□ -2.04
KAR4YCL055W SUI1P32911 108 aaKnown RBP2.32□□□□□ -2.04
KAR4YCL055W RPS1AP33442 255 aaKnown RBP2.32□□□□□ -2.04
KAR4YCL055W TAF14P35189 244 aa2.32□□□□□ -2.04
KAR4YCL055W YHB1P39676 399 aaKnown RBP2.32□□□□□ -2.04
KAR4YCL055W MEP1P40260 492 aa2.32□□□□□ -2.04
KAR4YCL055W YIL086CP40503 102 aa2.32□□□□□ -2.04
KAR4YCL055W YFR045WP43617 309 aa2.32□□□□□ -2.04
KAR4YCL055W FMP33P46998 180 aa2.32□□□□□ -2.04
KAR4YCL055W GTR2P53290 341 aa2.32□□□□□ -2.04
KAR4YCL055W CPD1P53314 239 aa2.32□□□□□ -2.04
KAR4YCL055W RCF2P53721 224 aa2.32□□□□□ -2.04
KAR4YCL055W YML018CQ03730 393 aa2.32□□□□□ -2.04
KAR4YCL055W BOP2Q06150 570 aa2.32□□□□□ -2.04
KAR4YCL055W DXO1Q06349 442 aa2.32□□□□□ -2.04
KAR4YCL055W YPR063CQ12160 140 aa2.32□□□□□ -2.04
KAR4YCL055W MHT1Q12525 324 aa2.32□□□□□ -2.04
KAR4YCL055W YKL018C-AQ3E7A7 99 aa2.32□□□□□ -2.04
KAR4YCL055W MDM35O60200 86 aa2.31□□□□□ -2.04
KAR4YCL055W PET494P07390 489 aaPredicted RBP2.31□□□□□ -2.04
KAR4YCL055W SSA3P09435 649 aaKnown RBP2.31□□□□□ -2.04
KAR4YCL055W RSR1P13856 272 aa2.31□□□□□ -2.04
KAR4YCL055W RPS27AP35997 82 aaKnown RBP2.31□□□□□ -2.04
KAR4YCL055W CAF4P36130 643 aa2.31□□□□□ -2.04
KAR4YCL055W RPS27BP38711 82 aa2.31□□□□□ -2.04
KAR4YCL055W ECM14P38836 430 aa2.31□□□□□ -2.04
KAR4YCL055W SEN34P39707 275 aa2.31□□□□□ -2.04
KAR4YCL055W YER034WP40022 185 aaKnown RBP2.31□□□□□ -2.04
KAR4YCL055W HPM1P40481 377 aa2.31□□□□□ -2.04
KAR4YCL055W APQ12P40532 138 aa2.31□□□□□ -2.04
KAR4YCL055W SYS1P41544 203 aa2.31□□□□□ -2.04
KAR4YCL055W PRM10P42946 383 aa2.31□□□□□ -2.04
KAR4YCL055W RAD17P48581 401 aa2.31□□□□□ -2.04
KAR4YCL055W CUS2P53830 285 aaPredicted RBP2.31□□□□□ -2.04
KAR4YCL055W YNL140CP53910 189 aa2.31□□□□□ -2.04
KAR4YCL055W SLM2P53955 656 aa2.31□□□□□ -2.04
KAR4YCL055W YNL010WP53981 241 aaKnown RBP2.31□□□□□ -2.04
KAR4YCL055W RFM1Q12192 310 aa2.31□□□□□ -2.04
KAR4YCL055W JLP1Q12358 412 aa2.31□□□□□ -2.04
KAR4YCL055W SNF8Q12483 233 aa2.31□□□□□ -2.04
KAR4YCL055W RAS2P01120 322 aaKnown RBP2.3□□□□□ -2.04
KAR4YCL055W YAK1P14680 807 aa2.3□□□□□ -2.04
KAR4YCL055W PHO80P20052 293 aa2.3□□□□□ -2.04
KAR4YCL055W CCA1P21269 546 aa2.3□□□□□ -2.04
KAR4YCL055W ATG15P25641 520 aa2.3□□□□□ -2.04
KAR4YCL055W MRPL15P36523 253 aa2.3□□□□□ -2.04
KAR4YCL055W YCR087C-AP37263 153 aa2.3□□□□□ -2.04
KAR4YCL055W YBL081WP38180 368 aaKnown RBP2.3□□□□□ -2.04
KAR4YCL055W MED8P38304 223 aa2.3□□□□□ -2.04
KAR4YCL055W YHL044WP38727 235 aa2.3□□□□□ -2.04
KAR4YCL055W RTT105P40063 208 aa2.3□□□□□ -2.04
KAR4YCL055W AVT6P40074 448 aa2.3□□□□□ -2.04
KAR4YCL055W ECO1P43605 281 aa2.3□□□□□ -2.04
KAR4YCL055W MRX5P47007 382 aa2.3□□□□□ -2.04
KAR4YCL055W TMA22P47089 198 aaPredicted RBP2.3□□□□□ -2.04
KAR4YCL055W USE1P53146 245 aa2.3□□□□□ -2.04
KAR4YCL055W RPN14P53196 417 aa2.3□□□□□ -2.04
KAR4YCL055W NOP19P53317 196 aaPredicted RBP2.3□□□□□ -2.04
KAR4YCL055W VBA1Q04301 562 aa2.3□□□□□ -2.04
KAR4YCL055W YDR124WQ04608 324 aa2.3□□□□□ -2.04
KAR4YCL055W CDC39P25655 2108 aaKnown RBP2.3□□□□□ -2.04
KAR4YCL055W SEC16P48415 2195 aaKnown RBP2.3□□□□□ -2.04
KAR4YCL055W STP22P25604 385 aa2.29□□□□□ -2.04
KAR4YCL055W SSO1P32867 290 aa2.29□□□□□ -2.04
KAR4YCL055W VPS21P36017 210 aaKnown RBP2.29□□□□□ -2.04
KAR4YCL055W CAB3P36076 571 aa2.29□□□□□ -2.04
KAR4YCL055W AIM2P39721 246 aa2.29□□□□□ -2.04
KAR4YCL055W HOC1P47124 396 aa2.29□□□□□ -2.04
KAR4YCL055W YDR476CQ03362 224 aa2.29□□□□□ -2.04
KAR4YCL055W NNT1Q05874 261 aa2.29□□□□□ -2.04
KAR4YCL055W YLR036CQ07986 203 aa2.29□□□□□ -2.04
KAR4YCL055W SAS5Q99314 248 aa2.29□□□□□ -2.04
KAR4YCL055W CAT2P32796 670 aaKnown RBP2.28□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms