RNA–Protein interactions for RNA: YBR229C

ROT2, Transcript of Glucosidase II catalytic subunit, yeastyeast

Gene ROT2, Length 2,865 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT2YBR229C RMD6P39975 231 aa4.3□□□□□ -1.72
ROT2YBR229C YER010CP40011 234 aa4.3□□□□□ -1.72
ROT2YBR229C MAP1Q01662 387 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
ROT2YBR229C YPL039WQ03080 316 aa4.3□□□□□ -1.72
ROT2YBR229C DIG2Q03373 323 aaKnown RBP4.3□□□□□ -1.72
ROT2YBR229C SWM1Q12379 170 aa4.3□□□□□ -1.72
ROT2YBR229C MET3P08536 511 aa4.29□□□□□ -1.72
ROT2YBR229C VMA3P25515 160 aa4.29□□□□□ -1.72
ROT2YBR229C PEX4P29340 183 aa4.29□□□□□ -1.72
ROT2YBR229C ATP3P38077 311 aaKnown RBP4.29□□□□□ -1.72
ROT2YBR229C YBR292CP38357 123 aa4.29□□□□□ -1.72
ROT2YBR229C TOK1P40310 691 aa4.29□□□□□ -1.72
ROT2YBR229C PAU15P40585 124 aa4.29□□□□□ -1.72
ROT2YBR229C PHB1P40961 287 aa4.29□□□□□ -1.72
ROT2YBR229C ADD37Q03233 198 aa4.29□□□□□ -1.72
ROT2YBR229C YDR102CQ03864 110 aa4.29□□□□□ -1.72
ROT2YBR229C BDS1Q08347 646 aa4.29□□□□□ -1.72
ROT2YBR229C WHI5Q12416 295 aa4.29□□□□□ -1.72
ROT2YBR229C YLR365WQ7LIF2 110 aa4.29□□□□□ -1.72
ROT2YBR229C CDC28P00546 298 aaKnown RBP4.29□□□□□ -1.72
ROT2YBR229C RIB5P38145 238 aa4.29□□□□□ -1.72
ROT2YBR229C SLM6P38343 150 aa4.29□□□□□ -1.72
ROT2YBR229C YER158CP40095 573 aa4.29□□□□□ -1.72
ROT2YBR229C LTP1P40347 161 aa4.29□□□□□ -1.72
ROT2YBR229C AIR1P40507 360 aaKnown RBP4.29□□□□□ -1.72
ROT2YBR229C RPA34P47006 233 aaPredicted RBP4.29□□□□□ -1.72
ROT2YBR229C RSM23Q01163 450 aa4.29□□□□□ -1.72
ROT2YBR229C YMR082CQ04276 118 aa4.29□□□□□ -1.72
ROT2YBR229C CRR1Q05790 422 aa4.29□□□□□ -1.72
ROT2YBR229C RPB3P16370 318 aaKnown RBP4.28□□□□□ -1.72
ROT2YBR229C MID1P41821 548 aa4.28□□□□□ -1.72
ROT2YBR229C IKS1P47042 667 aa4.28□□□□□ -1.72
ROT2YBR229C PCP1P53259 346 aa4.28□□□□□ -1.72
ROT2YBR229C YNR048WP53740 393 aa4.28□□□□□ -1.72
ROT2YBR229C YNR066CP53752 436 aa4.28□□□□□ -1.72
ROT2YBR229C YLR118CQ12354 227 aa4.28□□□□□ -1.72
ROT2YBR229C YIL046W-AQ3E7Z4 54 aa4.28□□□□□ -1.72
ROT2YBR229C HOP09932 586 aa4.28□□□□□ -1.72
ROT2YBR229C CKA1P15790 372 aa4.28□□□□□ -1.72
ROT2YBR229C PCL1P24867 279 aa4.28□□□□□ -1.72
ROT2YBR229C SWD2P36104 329 aaPredicted RBP4.28□□□□□ -1.72
ROT2YBR229C CDS1P38221 457 aa4.28□□□□□ -1.72
ROT2YBR229C YBR096WP38256 230 aa4.28□□□□□ -1.72
ROT2YBR229C AIM3P38266 947 aaKnown RBP4.28□□□□□ -1.72
ROT2YBR229C YPT31P38555 223 aaKnown RBP4.28□□□□□ -1.72
ROT2YBR229C IMD2P38697 523 aaKnown RBP4.28□□□□□ -1.72
ROT2YBR229C YND1P40009 630 aa4.28□□□□□ -1.72
ROT2YBR229C PGU1P47180 361 aa4.28□□□□□ -1.72
ROT2YBR229C MSY1P48527 492 aa4.28□□□□□ -1.72
ROT2YBR229C YDR286CQ05530 114 aa4.28□□□□□ -1.72
ROT2YBR229C COX1P00401 534 aa4.28□□□□□ -1.73
ROT2YBR229C COX5BP00425 151 aa4.28□□□□□ -1.73
ROT2YBR229C RPL30P14120 105 aaKnown RBP4.28□□□□□ -1.73
ROT2YBR229C CDC26P14724 124 aa4.28□□□□□ -1.73
ROT2YBR229C SEC59P20048 519 aa4.28□□□□□ -1.73
ROT2YBR229C OCH1P31755 480 aa4.28□□□□□ -1.73
ROT2YBR229C ERG2P32352 222 aa4.28□□□□□ -1.73
ROT2YBR229C GLC7P32598 312 aaKnown RBP4.28□□□□□ -1.73
ROT2YBR229C NTF2P33331 125 aaKnown RBP4.28□□□□□ -1.73
ROT2YBR229C FIG1P38224 298 aa4.28□□□□□ -1.73
ROT2YBR229C SLM1P40485 686 aa4.28□□□□□ -1.73
ROT2YBR229C YPS6P40583 537 aa4.28□□□□□ -1.73
ROT2YBR229C NIT2P47016 307 aa4.28□□□□□ -1.73
ROT2YBR229C YJR012CP47087 207 aa4.28□□□□□ -1.73
ROT2YBR229C ERG25P53045 309 aa4.28□□□□□ -1.73
ROT2YBR229C HOL1P53389 586 aa4.28□□□□□ -1.73
ROT2YBR229C YDR415CQ04033 374 aaPredicted RBP4.28□□□□□ -1.73
ROT2YBR229C GMC1Q04399 608 aa4.28□□□□□ -1.73
ROT2YBR229C YLR456WQ06199 204 aa4.28□□□□□ -1.73
ROT2YBR229C YDR157WA0A023PZE8 133 aa4.27□□□□□ -1.73
ROT2YBR229C GDH1P07262 454 aaKnown RBP4.27□□□□□ -1.73
ROT2YBR229C MAK32P23060 363 aa4.27□□□□□ -1.73
ROT2YBR229C POF1P25576 258 aa4.27□□□□□ -1.73
ROT2YBR229C YCR101CP25607 182 aa4.27□□□□□ -1.73
ROT2YBR229C LAC1P28496 418 aa4.27□□□□□ -1.73
ROT2YBR229C REC114P32841 428 aa4.27□□□□□ -1.73
ROT2YBR229C RFC2P40348 353 aa4.27□□□□□ -1.73
ROT2YBR229C PHS1P40857 217 aa4.27□□□□□ -1.73
ROT2YBR229C PUS4P48567 403 aaKnown RBP4.27□□□□□ -1.73
ROT2YBR229C MGA1P53050 456 aa4.27□□□□□ -1.73
ROT2YBR229C PEF1P53238 335 aa4.27□□□□□ -1.73
ROT2YBR229C RSM10Q03201 203 aa4.27□□□□□ -1.73
ROT2YBR229C CTR3Q06686 241 aa4.27□□□□□ -1.73
ROT2YBR229C RAD28Q12021 506 aa4.27□□□□□ -1.73
ROT2YBR229C HUT1Q12520 339 aa4.27□□□□□ -1.73
ROT2YBR229C COA2Q3E823 68 aa4.27□□□□□ -1.73
ROT2YBR229C TDH3P00359 332 aaKnown RBP RIP-Chip data4.27□□□□□ -1.73not detected
ROT2YBR229C YLL053CP0CD98 152 aa4.27□□□□□ -1.73
ROT2YBR229C YHR214C-DP0CX93 97 aa4.27□□□□□ -1.73
ROT2YBR229C MRS4P23500 304 aa4.27□□□□□ -1.73
ROT2YBR229C MRPS9P38120 278 aa4.27□□□□□ -1.73
ROT2YBR229C AVT5P38176 459 aa4.27□□□□□ -1.73
ROT2YBR229C ARC40P38328 384 aaKnown RBP4.27□□□□□ -1.73
ROT2YBR229C TRS20P38334 175 aa4.27□□□□□ -1.73
ROT2YBR229C YHR210CP38893 341 aa4.27□□□□□ -1.73
ROT2YBR229C YJL016WP47072 561 aa4.27□□□□□ -1.73
ROT2YBR229C OCA1P50946 238 aaPredicted RBP4.27□□□□□ -1.73
ROT2YBR229C YGL262WP53054 175 aa4.27□□□□□ -1.73
ROT2YBR229C MSO1P53604 210 aaKnown RBP4.27□□□□□ -1.73
ROT2YBR229C YNL165WP53891 406 aa4.27□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 26.4 ms