RNA–Protein interactions for RNA: YBL005W-A

YBL005W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YBL005W-A, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YBL005W-AYBL005W-A OST3P48439 350 aa2.3□□□□□ -2.04
YBL005W-AYBL005W-A USE1P53146 245 aa2.3□□□□□ -2.04
YBL005W-AYBL005W-A ASI3P53983 676 aa2.3□□□□□ -2.04
YBL005W-AYBL005W-A YPL039WQ03080 316 aa2.3□□□□□ -2.04
YBL005W-AYBL005W-A RNH1Q04740 348 aa2.3□□□□□ -2.04
YBL005W-AYBL005W-A PEX34P25584 144 aa2.29□□□□□ -2.04
YBL005W-AYBL005W-A MOT1P32333 1867 aa2.29□□□□□ -2.04
YBL005W-AYBL005W-A ECM13P38195 257 aa2.29□□□□□ -2.04
YBL005W-AYBL005W-A AIM18P38884 321 aa2.29□□□□□ -2.04
YBL005W-AYBL005W-A YER085CP40058 173 aa2.29□□□□□ -2.04
YBL005W-AYBL005W-A ECO1P43605 281 aa2.29□□□□□ -2.04
YBL005W-AYBL005W-A BUD13P46947 266 aaPredicted RBP2.29□□□□□ -2.04
YBL005W-AYBL005W-A HOC1P47124 396 aa2.29□□□□□ -2.04
YBL005W-AYBL005W-A LDB18Q07887 179 aa2.29□□□□□ -2.04
YBL005W-AYBL005W-A CLP1Q08685 445 aaPredicted RBP2.29□□□□□ -2.04
YBL005W-AYBL005W-A ISD11Q6Q560 94 aa2.29□□□□□ -2.04
YBL005W-AYBL005W-A YEL009C-AA0A023PZF2 135 aa2.28□□□□□ -2.04
YBL005W-AYBL005W-A YPR096CO13587 100 aa2.28□□□□□ -2.04
YBL005W-AYBL005W-A TDH2P00358 332 aaKnown RBP2.28□□□□□ -2.04
YBL005W-AYBL005W-A CMD1P06787 147 aaKnown RBP2.28□□□□□ -2.04
YBL005W-AYBL005W-A RPS23AP0CX29 145 aaKnown RBP2.28□□□□□ -2.04
YBL005W-AYBL005W-A RPS23BP0CX30 145 aa2.28□□□□□ -2.04
YBL005W-AYBL005W-A GPA2P10823 449 aa2.28□□□□□ -2.04
YBL005W-AYBL005W-A MGT1P26188 188 aa2.28□□□□□ -2.04
YBL005W-AYBL005W-A RPS5P26783 225 aaKnown RBP2.28□□□□□ -2.04
YBL005W-AYBL005W-A EHD3P28817 500 aa2.28□□□□□ -2.04
YBL005W-AYBL005W-A MSN4P33749 630 aa2.28□□□□□ -2.04
YBL005W-AYBL005W-A YBR096WP38256 230 aa2.28□□□□□ -2.04
YBL005W-AYBL005W-A FZO1P38297 855 aa2.28□□□□□ -2.04
YBL005W-AYBL005W-A URA8P38627 578 aaPredicted RBP2.28□□□□□ -2.04
YBL005W-AYBL005W-A YEL028WP39989 153 aa2.28□□□□□ -2.04
YBL005W-AYBL005W-A ALG9P53868 555 aaKnown RBP2.28□□□□□ -2.04
YBL005W-AYBL005W-A YPR098CQ06089 161 aa2.28□□□□□ -2.04
YBL005W-AYBL005W-A COQ10Q08058 207 aa2.28□□□□□ -2.04
YBL005W-AYBL005W-A PLB3Q08108 686 aa2.28□□□□□ -2.04
YBL005W-AYBL005W-A YCT1Q12235 531 aa2.28□□□□□ -2.04
YBL005W-AYBL005W-A SMT3Q12306 101 aaKnown RBP2.28□□□□□ -2.04
YBL005W-AYBL005W-A YBL112CQ3E7Y4 105 aa2.28□□□□□ -2.04
YBL005W-AYBL005W-A RPB4P20433 221 aaPredicted RBP2.27□□□□□ -2.05
YBL005W-AYBL005W-A LDB7P38210 180 aa2.27□□□□□ -2.05
YBL005W-AYBL005W-A EDC3P39998 551 aaKnown RBP2.27□□□□□ -2.05
YBL005W-AYBL005W-A THO1P40040 218 aaKnown RBP2.27□□□□□ -2.05
YBL005W-AYBL005W-A GCN20P43535 752 aaKnown RBP2.27□□□□□ -2.05
YBL005W-AYBL005W-A JHD2P47156 728 aaPredicted RBP2.27□□□□□ -2.05
YBL005W-AYBL005W-A MIG2P53035 382 aa2.27□□□□□ -2.05
YBL005W-AYBL005W-A NHP10Q03435 203 aa2.27□□□□□ -2.05
YBL005W-AYBL005W-A YMR166CQ03829 368 aa2.27□□□□□ -2.05
YBL005W-AYBL005W-A YPR147CQ06522 304 aaKnown RBP2.27□□□□□ -2.05
YBL005W-AYBL005W-A SNU23Q12368 194 aaPredicted RBP2.27□□□□□ -2.05
YBL005W-AYBL005W-A MRX4Q12467 430 aa2.27□□□□□ -2.05
YBL005W-AYBL005W-A YKR104WP0CE69 306 aa2.26□□□□□ -2.05
YBL005W-AYBL005W-A GOS1P38736 223 aa2.26□□□□□ -2.05
YBL005W-AYBL005W-A MED6P38782 295 aa2.26□□□□□ -2.05
YBL005W-AYBL005W-A BFR1P38934 470 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
YBL005W-AYBL005W-A TEM1P38987 245 aa2.26□□□□□ -2.05
YBL005W-AYBL005W-A YJL144WP47009 104 aa2.26□□□□□ -2.05
YBL005W-AYBL005W-A YJL028WP47062 111 aa2.26□□□□□ -2.05
YBL005W-AYBL005W-A NIF3P53081 288 aa2.26□□□□□ -2.05
YBL005W-AYBL005W-A MRH4P53166 561 aa2.26□□□□□ -2.05
YBL005W-AYBL005W-A DIA1P54005 336 aa2.26□□□□□ -2.05
YBL005W-AYBL005W-A CTF19Q02732 369 aa2.26□□□□□ -2.05
YBL005W-AYBL005W-A HPT1Q04178 221 aaKnown RBP2.26□□□□□ -2.05
YBL005W-AYBL005W-A SPG4Q04438 115 aa2.26□□□□□ -2.05
YBL005W-AYBL005W-A YDR114CQ04597 100 aa2.26□□□□□ -2.05
YBL005W-AYBL005W-A YPR114WQ06107 315 aa2.26□□□□□ -2.05
YBL005W-AYBL005W-A SWC7Q06707 132 aa2.26□□□□□ -2.05
YBL005W-AYBL005W-A RRS1Q08746 203 aaKnown RBP2.26□□□□□ -2.05
YBL005W-AYBL005W-A TIM22Q12328 207 aa2.26□□□□□ -2.05
YBL005W-AYBL005W-A MATALPHA1P0CY06 175 aa2.25□□□□□ -2.05
YBL005W-AYBL005W-A HMLALPHA1P0CY07 175 aa2.25□□□□□ -2.05
YBL005W-AYBL005W-A DPB2P24482 689 aaPredicted RBP2.25□□□□□ -2.05
YBL005W-AYBL005W-A SFC1P33303 322 aa2.25□□□□□ -2.05
YBL005W-AYBL005W-A YKL075CP36083 450 aa2.25□□□□□ -2.05
YBL005W-AYBL005W-A SMX2P40204 77 aaKnown RBP2.25□□□□□ -2.05
YBL005W-AYBL005W-A FCF1Q05498 189 aaPredicted RBP2.25□□□□□ -2.05
YBL005W-AYBL005W-A SPO77Q06134 477 aa2.25□□□□□ -2.05
YBL005W-AYBL005W-A YOL019WQ08157 551 aa2.25□□□□□ -2.05
YBL005W-AYBL005W-A SYC1Q08553 188 aaPredicted RBP2.25□□□□□ -2.05
YBL005W-AYBL005W-A GTT2Q12390 233 aa2.25□□□□□ -2.05
YBL005W-AYBL005W-A PEX11Q12462 236 aa2.25□□□□□ -2.05
YBL005W-AYBL005W-A YPL247CQ12523 523 aa2.25□□□□□ -2.05
YBL005W-AYBL005W-A HIS3P06633 220 aa2.24□□□□□ -2.05
YBL005W-AYBL005W-A CPA1P07258 411 aaKnown RBP2.24□□□□□ -2.05
YBL005W-AYBL005W-A NMT1P14743 455 aa2.24□□□□□ -2.05
YBL005W-AYBL005W-A PPH21P23594 369 aa2.24□□□□□ -2.05
YBL005W-AYBL005W-A TOM40P23644 387 aaKnown RBP2.24□□□□□ -2.05
YBL005W-AYBL005W-A RPC19P28000 142 aaKnown RBP2.24□□□□□ -2.05
YBL005W-AYBL005W-A CAB3P36076 571 aa2.24□□□□□ -2.05
YBL005W-AYBL005W-A OTU1P43558 301 aa2.24□□□□□ -2.05
YBL005W-AYBL005W-A RCF2P53721 224 aa2.24□□□□□ -2.05
YBL005W-AYBL005W-A RHO3Q00245 231 aaKnown RBP2.24□□□□□ -2.05
YBL005W-AYBL005W-A EMI1Q04406 187 aa2.24□□□□□ -2.05
YBL005W-AYBL005W-A YDR124WQ04608 324 aa2.24□□□□□ -2.05
YBL005W-AYBL005W-A CDC123Q05791 360 aa2.24□□□□□ -2.05
YBL005W-AYBL005W-A RRP40Q08285 240 aaKnown RBP2.24□□□□□ -2.05
YBL005W-AYBL005W-A NOT5Q12514 560 aaPredicted RBP2.24□□□□□ -2.05
YBL005W-AYBL005W-A YBL008W-AQ3E821 79 aa2.24□□□□□ -2.05
YBL005W-AYBL005W-A YKL068W-AQ3E826 78 aa2.24□□□□□ -2.05
YBL005W-AYBL005W-A UBR2Q07963 1872 aa2.24□□□□□ -2.05
YBL005W-AYBL005W-A LAA1P39526 2014 aa2.24□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms