RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 RASA4BC9J798 803 aa12.46□□□□□ -0.42
LINC00538-201ENST00000626109 ADCY6O43306 1168 aa12.46□□□□□ -0.42
LINC00538-201ENST00000626109 MSCO60682 206 aa12.46□□□□□ -0.42
LINC00538-201ENST00000626109 TMEM127O75204 238 aa12.46□□□□□ -0.42
LINC00538-201ENST00000626109 DUSP11O75319 330 aaKnown RBP12.46□□□□□ -0.42
LINC00538-201ENST00000626109 RAD52P43351 418 aa12.46□□□□□ -0.42
LINC00538-201ENST00000626109 ARHGAP1Q07960 439 aa12.46□□□□□ -0.42
LINC00538-201ENST00000626109 SPIRE1Q08AE8 756 aa12.46□□□□□ -0.42
LINC00538-201ENST00000626109 PDIA5Q14554 519 aa12.46□□□□□ -0.42
LINC00538-201ENST00000626109 SLC35F6Q8N357 371 aa12.46□□□□□ -0.42
LINC00538-201ENST00000626109 TAB3Q8N5C8 712 aaPredicted RBP12.46□□□□□ -0.42
LINC00538-201ENST00000626109 CELF2-AS1Q8N7Q2 184 aa12.46□□□□□ -0.42
LINC00538-201ENST00000626109 RDM1Q8NG50 284 aa12.46□□□□□ -0.42
LINC00538-201ENST00000626109 C17orf50Q8WW18 174 aa12.46□□□□□ -0.42
LINC00538-201ENST00000626109 STON2Q8WXE9 905 aa12.46□□□□□ -0.42
LINC00538-201ENST00000626109 PIH1D1Q9NWS0 290 aaKnown RBP12.46□□□□□ -0.42
LINC00538-201ENST00000626109 DDX20Q9UHI6 824 aaKnown RBP12.46□□□□□ -0.42
LINC00538-201ENST00000626109 CAPN11Q9UMQ6 739 aa12.46□□□□□ -0.42
LINC00538-201ENST00000626109 GDAQ9Y2T3 454 aa12.46□□□□□ -0.42
LINC00538-201ENST00000626109 EPN1Q9Y6I3 576 aaPredicted RBP12.46□□□□□ -0.42
LINC00538-201ENST00000626109 DYNC1LI2O43237 492 aaPredicted RBP12.45□□□□□ -0.42
LINC00538-201ENST00000626109 SGTAO43765 313 aa12.45□□□□□ -0.42
LINC00538-201ENST00000626109 CCNE2O96020 404 aa12.45□□□□□ -0.42
LINC00538-201ENST00000626109 GALNSP34059 522 aa12.45□□□□□ -0.42
LINC00538-201ENST00000626109 ACTR2P61160 394 aa12.45□□□□□ -0.42
LINC00538-201ENST00000626109 SLC7A5Q01650 507 aa12.45□□□□□ -0.42
LINC00538-201ENST00000626109 HAUS3Q68CZ6 603 aa12.45□□□□□ -0.42
LINC00538-201ENST00000626109 B3GNT9Q6UX72 402 aa12.45□□□□□ -0.42
LINC00538-201ENST00000626109 RNF135Q8IUD6 432 aa12.45□□□□□ -0.42
LINC00538-201ENST00000626109 OR8H1Q8NGG4 311 aa12.45□□□□□ -0.42
LINC00538-201ENST00000626109 LENG1Q96BZ8 264 aaPredicted RBP12.45□□□□□ -0.42
LINC00538-201ENST00000626109 IRX2Q9BZI1 471 aaPredicted RBP12.45□□□□□ -0.42
LINC00538-201ENST00000626109 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.45□□□□□ -0.42
LINC00538-201ENST00000626109 BCAS3Q9H6U6 928 aa12.45□□□□□ -0.42
LINC00538-201ENST00000626109 ZMAT5Q9UDW3 170 aaKnown RBP12.45□□□□□ -0.42
LINC00538-201ENST00000626109 SEC31AO94979 1220 aaKnown RBP12.45□□□□□ -0.42
LINC00538-201ENST00000626109 NDUFA10O95299 355 aa12.45□□□□□ -0.42
LINC00538-201ENST00000626109 OATP04181 439 aa12.45□□□□□ -0.42
LINC00538-201ENST00000626109 MCM3P25205 808 aa12.45□□□□□ -0.42
LINC00538-201ENST00000626109 CYLC1P35663 651 aaPredicted RBP12.45□□□□□ -0.42
LINC00538-201ENST00000626109 EPHA7Q15375 998 aa12.45□□□□□ -0.42
LINC00538-201ENST00000626109 KRT79Q5XKE5 535 aa12.45□□□□□ -0.42
LINC00538-201ENST00000626109 MIS18BP1Q6P0N0 1132 aa12.45□□□□□ -0.42
LINC00538-201ENST00000626109 HDXQ7Z353 690 aa12.45□□□□□ -0.42
LINC00538-201ENST00000626109 CABP7Q86V35 215 aa12.45□□□□□ -0.42
LINC00538-201ENST00000626109 PPTC7Q8NI37 304 aa12.45□□□□□ -0.42
LINC00538-201ENST00000626109 GSDMBQ8TAX9 411 aa12.45□□□□□ -0.42
LINC00538-201ENST00000626109 SEPT1Q8WYJ6 367 aa12.45□□□□□ -0.42
LINC00538-201ENST00000626109 EXOC1Q9NV70 894 aa12.45□□□□□ -0.42
LINC00538-201ENST00000626109 CALCOCO1Q9P1Z2 691 aa12.45□□□□□ -0.42
LINC00538-201ENST00000626109 RAB21Q9UL25 225 aa12.45□□□□□ -0.42
LINC00538-201ENST00000626109 PCDHA10Q9Y5I2 948 aa12.45□□□□□ -0.42
LINC00538-201ENST00000626109 SLC4A7Q9Y6M7 1214 aa12.45□□□□□ -0.42
LINC00538-201ENST00000626109 A0A0B4J203 849 aa12.44□□□□□ -0.42
LINC00538-201ENST00000626109 EML1O00423 815 aa12.44□□□□□ -0.42
LINC00538-201ENST00000626109 ABCB7O75027 752 aa12.44□□□□□ -0.42
LINC00538-201ENST00000626109 FGFR1OPO95684 399 aaKnown RBP12.44□□□□□ -0.42
LINC00538-201ENST00000626109 PSAPP07602 524 aa12.44□□□□□ -0.42
LINC00538-201ENST00000626109 KRT10P13645 584 aa12.44□□□□□ -0.42
LINC00538-201ENST00000626109 CPT1AP50416 773 aa12.44□□□□□ -0.42
LINC00538-201ENST00000626109 MYBPC3Q14896 1274 aa12.44□□□□□ -0.42
LINC00538-201ENST00000626109 LONRF2Q1L5Z9 754 aa12.44□□□□□ -0.42
LINC00538-201ENST00000626109 HSDL1Q3SXM5 330 aa12.44□□□□□ -0.42
LINC00538-201ENST00000626109 CFAP58Q5T655 872 aa12.44□□□□□ -0.42
LINC00538-201ENST00000626109 CNNM4Q6P4Q7 775 aa12.44□□□□□ -0.42
LINC00538-201ENST00000626109 FIP1L1Q6UN15 594 aaKnown RBP12.44□□□□□ -0.42
LINC00538-201ENST00000626109 MSANTD4Q8NCY6 345 aa12.44□□□□□ -0.42
LINC00538-201ENST00000626109 SNX29Q8TEQ0 813 aa12.44□□□□□ -0.42
LINC00538-201ENST00000626109 USP33Q8TEY7 942 aa12.44□□□□□ -0.42
LINC00538-201ENST00000626109 AFG1LQ8WV93 481 aa12.44□□□□□ -0.42
LINC00538-201ENST00000626109 RSAD2Q8WXG1 361 aa12.44□□□□□ -0.42
LINC00538-201ENST00000626109 CALML4Q96GE6 196 aa12.44□□□□□ -0.42
LINC00538-201ENST00000626109 GPR20Q99678 358 aa12.44□□□□□ -0.42
LINC00538-201ENST00000626109 C7orf25Q9BPX7 421 aa12.44□□□□□ -0.42
LINC00538-201ENST00000626109 YIPF4Q9BSR8 244 aa12.44□□□□□ -0.42
LINC00538-201ENST00000626109 UBXN6Q9BZV1 441 aa12.44□□□□□ -0.42
LINC00538-201ENST00000626109 UNC93B1Q9H1C4 597 aa12.44□□□□□ -0.42
LINC00538-201ENST00000626109 XPNPEP3Q9NQH7 507 aa12.44□□□□□ -0.42
LINC00538-201ENST00000626109 MYO6Q9UM54 1294 aa12.44□□□□□ -0.42
LINC00538-201ENST00000626109 MAPK8IP1Q9UQF2 711 aa12.44□□□□□ -0.42
LINC00538-201ENST00000626109 DMTF1Q9Y222 760 aa12.44□□□□□ -0.42
LINC00538-201ENST00000626109 PP2D1A8MPX8 630 aa12.43□□□□□ -0.42
LINC00538-201ENST00000626109 BACH1O14867 736 aa12.43□□□□□ -0.42
LINC00538-201ENST00000626109 KRT86O43790 486 aa12.43□□□□□ -0.42
LINC00538-201ENST00000626109 MYCP01106 439 aaPredicted RBP12.43□□□□□ -0.42
LINC00538-201ENST00000626109 MMP3P08254 477 aa12.43□□□□□ -0.42
LINC00538-201ENST00000626109 SUPT20HL2P0C7V6 817 aa12.43□□□□□ -0.42
LINC00538-201ENST00000626109 CCL5P13501 91 aa12.43□□□□□ -0.42
LINC00538-201ENST00000626109 CCNE1P24864 410 aa12.43□□□□□ -0.42
LINC00538-201ENST00000626109 CDC25AP30304 524 aa12.43□□□□□ -0.42
LINC00538-201ENST00000626109 GJA9P57773 515 aa12.43□□□□□ -0.42
LINC00538-201ENST00000626109 PLIN5Q00G26 463 aa12.43□□□□□ -0.42
LINC00538-201ENST00000626109 CCDC170Q8IYT3 715 aa12.43□□□□□ -0.42
LINC00538-201ENST00000626109 FAM26EQ8N5C1 309 aa12.43□□□□□ -0.42
LINC00538-201ENST00000626109 CSGALNACT2Q8N6G5 542 aa12.43□□□□□ -0.42
LINC00538-201ENST00000626109 FUT8Q9BYC5 575 aa12.43□□□□□ -0.42
LINC00538-201ENST00000626109 UPF3AQ9H1J1 476 aaKnown RBP12.43□□□□□ -0.42
LINC00538-201ENST00000626109 PCNTO95613 3336 aa12.43□□□□□ -0.42
LINC00538-201ENST00000626109 KDM3AQ9Y4C1 1321 aa12.43□□□□□ -0.42
LINC00538-201ENST00000626109 GSTTP1A0A1W2PQM5 241 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms