RNA–Protein interactions for RNA: ENST00000620828.4

FMR1-217, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best)

Gene FMR1, Length 4,830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-217ENST00000620828 SPATA18Q8TC71 538 aa6.2□□□□□ -1.42
FMR1-217ENST00000620828 NECAB3Q96P71 396 aaPredicted RBP6.2□□□□□ -1.42
FMR1-217ENST00000620828 VRTNQ9H8Y1 702 aa6.2□□□□□ -1.42
FMR1-217ENST00000620828 SYN3O14994 580 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 TGM5O43548 720 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 RHOBTB3O94955 611 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 THP07101 528 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 PFKFB1P16118 471 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 ITIH3Q06033 890 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 CUL4BQ13620 913 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 PTCRAQ6ISU1 281 aaPredicted RBP6.19□□□□□ -1.42
FMR1-217ENST00000620828 HSCBQ8IWL3 235 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 BRSK2Q8IWQ3 736 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 ZNF516Q92618 1163 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 CASP10Q92851 521 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 MKNK1Q9BUB5 465 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 ASB7Q9H672 318 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 GDAP2Q9NXN4 497 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 KLK14Q9P0G3 267 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 TFIP11Q9UBB9 837 aaKnown RBP6.19□□□□□ -1.42
FMR1-217ENST00000620828 PCDHB8Q9UN66 801 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 FAN1Q9Y2M0 1017 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 MIA3Q5JRA6 1907 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 ZNF318Q5VUA4 2279 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 NCANO14594 1321 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 IGFBP4P22692 258 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 UBA7P41226 1012 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 KCNB1Q14721 858 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 AUTS2Q8WXX7 1259 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 GOLGA2P5Q9HBQ8 144 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 LARSQ9P2J5 1176 aaKnown RBP6.19□□□□□ -1.42
FMR1-217ENST00000620828 TRAF3IP3Q9Y228 551 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 EML5Q05BV3 1969 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 ZC3H11AO75152 810 aaKnown RBP eCLIP6.19□□□□□ -1.42
FMR1-217ENST00000620828 PRR29P0C7W0 189 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 CXCL8P10145 99 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 RFX1P22670 979 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 FCARP24071 287 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 GLUD2P49448 558 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 NDUFA8P51970 172 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 MYBPC2Q14324 1141 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 AAK1Q2M2I8 961 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 RRAGBQ5VZM2 374 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 C9orf57Q5W0N0 161 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 SV2BQ7L1I2 683 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 TMC8Q8IU68 726 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 ZDHHC7Q9NXF8 308 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 USTQ9Y2C2 406 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 PER2O15055 1255 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 TYMPP19971 482 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 ALDH7A1P49419 539 aaKnown RBP6.19□□□□□ -1.42
FMR1-217ENST00000620828 NDUFV1P49821 464 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 CREMQ03060 361 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 PLPP4Q5VZY2 271 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 THNSL1Q8IYQ7 743 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 UHRF1Q96T88 793 aaPredicted RBP6.19□□□□□ -1.42
FMR1-217ENST00000620828 PHF7Q9BWX1 381 aaPredicted RBP6.19□□□□□ -1.42
FMR1-217ENST00000620828 CRISPLD1Q9H336 500 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.19□□□□□ -1.42
FMR1-217ENST00000620828 CDH22Q9UJ99 828 aa6.19□□□□□ -1.42
FMR1-217ENST00000620828 KIAA0391O15091 583 aaKnown RBP6.18□□□□□ -1.42
FMR1-217ENST00000620828 NFICP08651 508 aa6.18□□□□□ -1.42
FMR1-217ENST00000620828 FAM163BP0C2L3 166 aa6.18□□□□□ -1.42
FMR1-217ENST00000620828 BMP6P22004 513 aa6.18□□□□□ -1.42
FMR1-217ENST00000620828 ZNF568Q3ZCX4 644 aa6.18□□□□□ -1.42
FMR1-217ENST00000620828 JADE1Q6IE81 842 aa6.18□□□□□ -1.42
FMR1-217ENST00000620828 HPS3Q969F9 1004 aa6.18□□□□□ -1.42
FMR1-217ENST00000620828 OXCT2Q9BYC2 517 aaPredicted RBP6.18□□□□□ -1.42
FMR1-217ENST00000620828 XYLT2Q9H1B5 865 aa6.18□□□□□ -1.42
FMR1-217ENST00000620828 POMKQ9H5K3 350 aa6.18□□□□□ -1.42
FMR1-217ENST00000620828 SSX2IPQ9Y2D8 614 aa6.18□□□□□ -1.42
FMR1-217ENST00000620828 BRWD1Q9NSI6 2320 aa6.18□□□□□ -1.42
FMR1-217ENST00000620828 SF3B1O75533 1304 aaKnown RBP eCLIP6.18□□□□□ -1.42
FMR1-217ENST00000620828 ARNTLO00327 626 aa6.18□□□□□ -1.42
FMR1-217ENST00000620828 DLL1O00548 723 aa6.18□□□□□ -1.42
FMR1-217ENST00000620828 PODXLO00592 558 aa6.18□□□□□ -1.42
FMR1-217ENST00000620828 MARCH6O60337 910 aa6.18□□□□□ -1.42
FMR1-217ENST00000620828 CXCL14O95715 111 aa6.18□□□□□ -1.42
FMR1-217ENST00000620828 TKTP29401 623 aaKnown RBP6.18□□□□□ -1.42
FMR1-217ENST00000620828 GNL2Q13823 731 aaKnown RBP6.18□□□□□ -1.42
FMR1-217ENST00000620828 USP41Q3LFD5 358 aa6.18□□□□□ -1.42
FMR1-217ENST00000620828 PPFIBP1Q86W92 1011 aa6.18□□□□□ -1.42
FMR1-217ENST00000620828 TCEAL8Q8IYN2 117 aa6.18□□□□□ -1.42
FMR1-217ENST00000620828 KBTBD7Q8WVZ9 684 aa6.18□□□□□ -1.42
FMR1-217ENST00000620828 B3GALT6Q96L58 329 aa6.18□□□□□ -1.42
FMR1-217ENST00000620828 TIGD1Q96MW7 591 aa6.18□□□□□ -1.42
FMR1-217ENST00000620828 ACAP3Q96P50 834 aa6.18□□□□□ -1.42
FMR1-217ENST00000620828 COLEC11Q9BWP8 271 aa6.18□□□□□ -1.42
FMR1-217ENST00000620828 ZCWPW1Q9H0M4 648 aa6.18□□□□□ -1.42
FMR1-217ENST00000620828 SFXN1Q9H9B4 322 aa6.18□□□□□ -1.42
FMR1-217ENST00000620828 TRPV4Q9HBA0 871 aa6.18□□□□□ -1.42
FMR1-217ENST00000620828 WDR6Q9NNW5 1121 aaKnown RBP6.18□□□□□ -1.42
FMR1-217ENST00000620828 PANK4Q9NVE7 773 aa6.18□□□□□ -1.42
FMR1-217ENST00000620828 CGNQ9P2M7 1197 aaKnown RBP6.18□□□□□ -1.42
FMR1-217ENST00000620828 CCDC39Q9UFE4 941 aa6.18□□□□□ -1.42
FMR1-217ENST00000620828 KCNH3Q9ULD8 1083 aa6.18□□□□□ -1.42
FMR1-217ENST00000620828 EXTL3O43909 919 aa6.18□□□□□ -1.42
FMR1-217ENST00000620828 ZMYND10O75800 440 aa6.18□□□□□ -1.42
FMR1-217ENST00000620828 SEC24AO95486 1093 aa6.18□□□□□ -1.42
FMR1-217ENST00000620828 KRT17Q04695 432 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms