RNA–Protein interactions for RNA: ENST00000592621.5

RANBP3-228, Transcript of RAN binding protein 3, humanhuman

TSL 5

Gene RANBP3, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-228ENST00000592621 VPS52Q8N1B4 723 aa12.67□□□□□ -0.38
RANBP3-228ENST00000592621 TRIML1Q8N9V2 468 aa12.67□□□□□ -0.38
RANBP3-228ENST00000592621 MAFAQ8NHW3 353 aaPredicted RBP12.67□□□□□ -0.38
RANBP3-228ENST00000592621 CXorf38Q8TB03 319 aa12.67□□□□□ -0.38
RANBP3-228ENST00000592621 FAM212AQ96EL1 285 aa12.67□□□□□ -0.38
RANBP3-228ENST00000592621 DDX27Q96GQ7 796 aaKnown RBP12.67□□□□□ -0.38
RANBP3-228ENST00000592621 MFSD14AQ96MC6 490 aa12.67□□□□□ -0.38
RANBP3-228ENST00000592621 TCF25Q9BQ70 676 aa12.67□□□□□ -0.38
RANBP3-228ENST00000592621 HERC2P3Q9BVR0 1158 aa12.67□□□□□ -0.38
RANBP3-228ENST00000592621 NSUN3Q9H649 340 aaKnown RBP12.67□□□□□ -0.38
RANBP3-228ENST00000592621 PDE11AQ9HCR9 933 aa12.67□□□□□ -0.38
RANBP3-228ENST00000592621 NGRNQ9NPE2 291 aaKnown RBP12.67□□□□□ -0.38
RANBP3-228ENST00000592621 CHST7Q9NS84 486 aa12.67□□□□□ -0.38
RANBP3-228ENST00000592621 IRAK3Q9Y616 596 aa12.67□□□□□ -0.38
RANBP3-228ENST00000592621 PTPRJQ12913 1337 aa12.66□□□□□ -0.38
RANBP3-228ENST00000592621 ANO9A1A5B4 782 aa12.66□□□□□ -0.38
RANBP3-228ENST00000592621 HIDE1A8MVS5 230 aa12.66□□□□□ -0.38
RANBP3-228ENST00000592621 PPP1R3GB7ZBB8 358 aa12.66□□□□□ -0.38
RANBP3-228ENST00000592621 BIN1O00499 593 aa12.66□□□□□ -0.38
RANBP3-228ENST00000592621 PPEF2O14830 753 aa12.66□□□□□ -0.38
RANBP3-228ENST00000592621 XPOTO43592 962 aaKnown RBP12.66□□□□□ -0.38
RANBP3-228ENST00000592621 TADA2AO75478 443 aa12.66□□□□□ -0.38
RANBP3-228ENST00000592621 B3GAT3O94766 335 aa12.66□□□□□ -0.38
RANBP3-228ENST00000592621 CSPG5O95196 566 aa12.66□□□□□ -0.38
RANBP3-228ENST00000592621 MCM4P33991 863 aa12.66□□□□□ -0.38
RANBP3-228ENST00000592621 CASP4P49662 377 aa12.66□□□□□ -0.38
RANBP3-228ENST00000592621 PMS1P54277 932 aaKnown RBP12.66□□□□□ -0.38
RANBP3-228ENST00000592621 CYP24A1Q07973 514 aa12.66□□□□□ -0.38
RANBP3-228ENST00000592621 PSMD6Q15008 389 aa12.66□□□□□ -0.38
RANBP3-228ENST00000592621 PTPN14Q15678 1187 aa12.66□□□□□ -0.38
RANBP3-228ENST00000592621 EDRF1Q3B7T1 1238 aa12.66□□□□□ -0.38
RANBP3-228ENST00000592621 PLPP4Q5VZY2 271 aa12.66□□□□□ -0.38
RANBP3-228ENST00000592621 TMC7Q7Z402 723 aa12.66□□□□□ -0.38
RANBP3-228ENST00000592621 ZC3H3Q8IXZ2 948 aaKnown RBP12.66□□□□□ -0.38
RANBP3-228ENST00000592621 MRPL43Q8N983 215 aaKnown RBP12.66□□□□□ -0.38
RANBP3-228ENST00000592621 RDH13Q8NBN7 331 aa12.66□□□□□ -0.38
RANBP3-228ENST00000592621 BEST2Q8NFU1 509 aa12.66□□□□□ -0.38
RANBP3-228ENST00000592621 PLEKHO2Q8TD55 490 aa12.66□□□□□ -0.38
RANBP3-228ENST00000592621 HASPINQ8TF76 798 aa12.66□□□□□ -0.38
RANBP3-228ENST00000592621 NUP62CLQ9H1M0 184 aa12.66□□□□□ -0.38
RANBP3-228ENST00000592621 SF3B1O75533 1304 aaKnown RBP eCLIP12.65□□□□□ -0.381e-6■■■■■ 147.7
RANBP3-228ENST00000592621 C2orf71A6NGG8 1288 aa12.65□□□□□ -0.38
RANBP3-228ENST00000592621 PIRO00625 290 aa12.65□□□□□ -0.38
RANBP3-228ENST00000592621 MAPK13O15264 365 aa12.65□□□□□ -0.38
RANBP3-228ENST00000592621 EXOC3O60645 756 aa12.65□□□□□ -0.38
RANBP3-228ENST00000592621 SLC34A2O95436 690 aa12.65□□□□□ -0.38
RANBP3-228ENST00000592621 NR2F2P24468 414 aa12.65□□□□□ -0.38
RANBP3-228ENST00000592621 PPP1R2P41236 205 aa12.65□□□□□ -0.38
RANBP3-228ENST00000592621 AARSP49588 968 aaKnown RBP eCLIP12.65□□□□□ -0.38
RANBP3-228ENST00000592621 MCCD1P59942 119 aaPredicted RBP12.65□□□□□ -0.38
RANBP3-228ENST00000592621 CLDN10P78369 228 aa12.65□□□□□ -0.38
RANBP3-228ENST00000592621 DSG1Q02413 1049 aa12.65□□□□□ -0.38
RANBP3-228ENST00000592621 HYAL1Q12794 435 aa12.65□□□□□ -0.38
RANBP3-228ENST00000592621 KCNC3Q14003 757 aa12.65□□□□□ -0.38
RANBP3-228ENST00000592621 SMC1AQ14683 1233 aaKnown RBP12.65□□□□□ -0.38
RANBP3-228ENST00000592621 SURF1Q15526 300 aa12.65□□□□□ -0.38
RANBP3-228ENST00000592621 KIAA0319Q5VV43 1072 aa12.65□□□□□ -0.38
RANBP3-228ENST00000592621 C9orf57Q5W0N0 161 aa12.65□□□□□ -0.38
RANBP3-228ENST00000592621 ANKRD40Q6AI12 368 aa12.65□□□□□ -0.38
RANBP3-228ENST00000592621 SCARA3Q6AZY7 606 aa12.65□□□□□ -0.38
RANBP3-228ENST00000592621 RBM43Q6ZSC3 357 aaKnown RBP12.65□□□□□ -0.38
RANBP3-228ENST00000592621 GPR65Q8IYL9 337 aa12.65□□□□□ -0.38
RANBP3-228ENST00000592621 MICALL1Q8N3F8 863 aa12.65□□□□□ -0.38
RANBP3-228ENST00000592621 C1orf127Q8N9H9 656 aa12.65□□□□□ -0.38
RANBP3-228ENST00000592621 NOC3LQ8WTT2 800 aaKnown RBP12.65□□□□□ -0.38
RANBP3-228ENST00000592621 AUTS2Q8WXX7 1259 aa12.65□□□□□ -0.38
RANBP3-228ENST00000592621 FAM84AQ96KN4 292 aa12.65□□□□□ -0.38
RANBP3-228ENST00000592621 ENTPD7Q9NQZ7 604 aa12.65□□□□□ -0.38
RANBP3-228ENST00000592621 TRIM49BA6NDI0 452 aa12.64□□□□□ -0.39
RANBP3-228ENST00000592621 AKAP3O75969 853 aa12.64□□□□□ -0.39
RANBP3-228ENST00000592621 CXCL14O95715 111 aa12.64□□□□□ -0.39
RANBP3-228ENST00000592621 MBD3O95983 291 aa12.64□□□□□ -0.39
RANBP3-228ENST00000592621 FGFR3P22607 806 aa12.64□□□□□ -0.39
RANBP3-228ENST00000592621 CCNE1P24864 410 aa12.64□□□□□ -0.39
RANBP3-228ENST00000592621 GTF2F1P35269 517 aaKnown RBP eCLIP12.64□□□□□ -0.391e-15■■■■■ 63.3
RANBP3-228ENST00000592621 BRCC3P46736 316 aa12.64□□□□□ -0.39
RANBP3-228ENST00000592621 ELAVL2Q12926 359 aaKnown RBP12.64□□□□□ -0.39
RANBP3-228ENST00000592621 CCDC85BQ15834 202 aaPredicted RBP12.64□□□□□ -0.39
RANBP3-228ENST00000592621 DUSP6Q16828 381 aa12.64□□□□□ -0.39
RANBP3-228ENST00000592621 CTC1Q2NKJ3 1217 aa12.64□□□□□ -0.39
RANBP3-228ENST00000592621 USP41Q3LFD5 358 aa12.64□□□□□ -0.39
RANBP3-228ENST00000592621 RTP2Q5QGT7 225 aa12.64□□□□□ -0.39
RANBP3-228ENST00000592621 LMBRD2Q68DH5 695 aaPredicted RBP12.64□□□□□ -0.39
RANBP3-228ENST00000592621 FOXR2Q6PJQ5 311 aa12.64□□□□□ -0.39
RANBP3-228ENST00000592621 WDR49Q8IV35 697 aa12.64□□□□□ -0.39
RANBP3-228ENST00000592621 OR5B17Q8NGF7 314 aa12.64□□□□□ -0.39
RANBP3-228ENST00000592621 MICAL1Q8TDZ2 1067 aa12.64□□□□□ -0.39
RANBP3-228ENST00000592621 PARD3BQ8TEW8 1205 aa12.64□□□□□ -0.39
RANBP3-228ENST00000592621 BORCS6Q96GS4 357 aa12.64□□□□□ -0.39
RANBP3-228ENST00000592621 DHTKD1Q96HY7 919 aaPredicted RBP12.64□□□□□ -0.39
RANBP3-228ENST00000592621 B3GALT6Q96L58 329 aa12.64□□□□□ -0.39
RANBP3-228ENST00000592621 CGRRF1Q99675 332 aa12.64□□□□□ -0.39
RANBP3-228ENST00000592621 RXFP1Q9HBX9 757 aa12.64□□□□□ -0.39
RANBP3-228ENST00000592621 INTS13Q9NVM9 706 aa12.64□□□□□ -0.39
RANBP3-228ENST00000592621 DPP3Q9NY33 737 aa12.64□□□□□ -0.39
RANBP3-228ENST00000592621 UNC80Q8N2C7 3258 aa12.63□□□□□ -0.39
RANBP3-228ENST00000592621 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.63□□□□□ -0.39
RANBP3-228ENST00000592621 LRRIQ3A6PVS8 624 aaPredicted RBP12.63□□□□□ -0.39
RANBP3-228ENST00000592621 I3L4J1 428 aa12.63□□□□□ -0.39
RANBP3-228ENST00000592621 M0QZQ0 153 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms