RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 RDH13Q8NBN7 331 aa7.32□□□□□ -1.24
LINC00517-202ENST00000554257 ACAP3Q96P50 834 aa7.32□□□□□ -1.24
LINC00517-202ENST00000554257 PAAF1Q9BRP4 392 aa7.32□□□□□ -1.24
LINC00517-202ENST00000554257 VN1R3Q9BXE9 311 aa7.32□□□□□ -1.24
LINC00517-202ENST00000554257 HCSTQ9UBK5 93 aa7.32□□□□□ -1.24
LINC00517-202ENST00000554257 ASS1P00966 412 aaKnown RBP7.31□□□□□ -1.24
LINC00517-202ENST00000554257 ACTN1P12814 892 aa7.31□□□□□ -1.24
LINC00517-202ENST00000554257 KLHDC7AQ5VTJ3 777 aa7.31□□□□□ -1.24
LINC00517-202ENST00000554257 WDR59Q6PJI9 974 aa7.31□□□□□ -1.24
LINC00517-202ENST00000554257 TC2NQ8N9U0 490 aa7.31□□□□□ -1.24
LINC00517-202ENST00000554257 EHBP1Q8NDI1 1231 aa7.31□□□□□ -1.24
LINC00517-202ENST00000554257 BCL7CQ8WUZ0 217 aaPredicted RBP7.31□□□□□ -1.24
LINC00517-202ENST00000554257 MARCH5Q9NX47 278 aa7.31□□□□□ -1.24
LINC00517-202ENST00000554257 GINS2Q9Y248 185 aa7.31□□□□□ -1.24
LINC00517-202ENST00000554257 MYH10P35580 1976 aa7.31□□□□□ -1.24
LINC00517-202ENST00000554257 TMEM189-UBE2V1I3L0A0 370 aa7.31□□□□□ -1.24
LINC00517-202ENST00000554257 FGFR1P11362 822 aa7.31□□□□□ -1.24
LINC00517-202ENST00000554257 MLH1P40692 756 aa7.31□□□□□ -1.24
LINC00517-202ENST00000554257 GCLMP48507 274 aa7.31□□□□□ -1.24
LINC00517-202ENST00000554257 FXR1P51114 621 aaKnown RBP eCLIP7.31□□□□□ -1.24
LINC00517-202ENST00000554257 GUCY2FP51841 1108 aa7.31□□□□□ -1.24
LINC00517-202ENST00000554257 UBASH3AP57075 661 aa7.31□□□□□ -1.24
LINC00517-202ENST00000554257 C9orf57Q5W0N0 161 aa7.31□□□□□ -1.24
LINC00517-202ENST00000554257 TRAPPC11Q7Z392 1133 aa7.31□□□□□ -1.24
LINC00517-202ENST00000554257 NPAS4Q8IUM7 802 aa7.31□□□□□ -1.24
LINC00517-202ENST00000554257 C7orf61Q8IZ16 206 aa7.31□□□□□ -1.24
LINC00517-202ENST00000554257 WHAMMQ8TF30 809 aa7.31□□□□□ -1.24
LINC00517-202ENST00000554257 ELMO3Q96BJ8 720 aa7.31□□□□□ -1.24
LINC00517-202ENST00000554257 FAXDC2Q96IV6 333 aa7.31□□□□□ -1.24
LINC00517-202ENST00000554257 PKMYT1Q99640 499 aa7.31□□□□□ -1.24
LINC00517-202ENST00000554257 GDF15Q99988 308 aa7.31□□□□□ -1.24
LINC00517-202ENST00000554257 CXXC1Q9P0U4 656 aaPredicted RBP7.31□□□□□ -1.24
LINC00517-202ENST00000554257 CACNG4Q9UBN1 327 aa7.31□□□□□ -1.24
LINC00517-202ENST00000554257 NOD1Q9Y239 953 aa7.31□□□□□ -1.24
LINC00517-202ENST00000554257 ABHD14A-ACY1A0A1B0GW23 586 aa7.31□□□□□ -1.24
LINC00517-202ENST00000554257 BECN2A8MW95 431 aa7.31□□□□□ -1.24
LINC00517-202ENST00000554257 F8W810 466 aa7.31□□□□□ -1.24
LINC00517-202ENST00000554257 ARHGEF15O94989 841 aa7.31□□□□□ -1.24
LINC00517-202ENST00000554257 OSTNP61366 133 aa7.31□□□□□ -1.24
LINC00517-202ENST00000554257 HGSNATQ68CP4 663 aa7.31□□□□□ -1.24
LINC00517-202ENST00000554257 ZNF280BQ86YH2 543 aa7.31□□□□□ -1.24
LINC00517-202ENST00000554257 SEPT8Q92599 483 aa7.31□□□□□ -1.24
LINC00517-202ENST00000554257 DNAJC7Q99615 494 aa7.31□□□□□ -1.24
LINC00517-202ENST00000554257 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.31□□□□□ -1.24
LINC00517-202ENST00000554257 INTS2Q9H0H0 1204 aaKnown RBP7.31□□□□□ -1.24
LINC00517-202ENST00000554257 KCNF1Q9H3M0 494 aa7.31□□□□□ -1.24
LINC00517-202ENST00000554257 RPF1Q9H9Y2 349 aaKnown RBP7.31□□□□□ -1.24
LINC00517-202ENST00000554257 NUB1Q9Y5A7 615 aa7.31□□□□□ -1.24
LINC00517-202ENST00000554257 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.31□□□□□ -1.24
LINC00517-202ENST00000554257 ZC3H11AO75152 810 aaKnown RBP eCLIP7.3□□□□□ -1.24
LINC00517-202ENST00000554257 SKIP12755 728 aa7.3□□□□□ -1.24
LINC00517-202ENST00000554257 PRKCSHP14314 528 aaPredicted RBP7.3□□□□□ -1.24
LINC00517-202ENST00000554257 AP3M2P53677 418 aa7.3□□□□□ -1.24
LINC00517-202ENST00000554257 MYL7Q01449 175 aa7.3□□□□□ -1.24
LINC00517-202ENST00000554257 MEA1Q16626 185 aa7.3□□□□□ -1.24
LINC00517-202ENST00000554257 KRT39Q6A163 491 aa7.3□□□□□ -1.24
LINC00517-202ENST00000554257 TWF2Q6IBS0 349 aaKnown RBP7.3□□□□□ -1.24
LINC00517-202ENST00000554257 GJB7Q6PEY0 223 aa7.3□□□□□ -1.24
LINC00517-202ENST00000554257 KBTBD7Q8WVZ9 684 aa7.3□□□□□ -1.24
LINC00517-202ENST00000554257 KAT5Q92993 513 aa7.3□□□□□ -1.24
LINC00517-202ENST00000554257 GOLGA2P5Q9HBQ8 144 aa7.3□□□□□ -1.24
LINC00517-202ENST00000554257 GDAP2Q9NXN4 497 aa7.3□□□□□ -1.24
LINC00517-202ENST00000554257 KLK14Q9P0G3 267 aa7.3□□□□□ -1.24
LINC00517-202ENST00000554257 ITGA11Q9UKX5 1188 aa7.3□□□□□ -1.24
LINC00517-202ENST00000554257 CAPN11Q9UMQ6 739 aa7.3□□□□□ -1.24
LINC00517-202ENST00000554257 HLA-DRAP01903 254 aa7.3□□□□□ -1.24
LINC00517-202ENST00000554257 ITGB1P05556 798 aa7.3□□□□□ -1.24
LINC00517-202ENST00000554257 GRIK3Q13003 919 aa7.3□□□□□ -1.24
LINC00517-202ENST00000554257 TMEM132DQ14C87 1099 aa7.3□□□□□ -1.24
LINC00517-202ENST00000554257 SYCP1Q15431 976 aa7.3□□□□□ -1.24
LINC00517-202ENST00000554257 SURF1Q15526 300 aa7.3□□□□□ -1.24
LINC00517-202ENST00000554257 ASTE1Q2TB18 679 aaPredicted RBP7.3□□□□□ -1.24
LINC00517-202ENST00000554257 CCDC40Q4G0X9 1142 aa7.3□□□□□ -1.24
LINC00517-202ENST00000554257 IQCEQ6IPM2 695 aa7.3□□□□□ -1.24
LINC00517-202ENST00000554257 TATDN2Q93075 761 aa7.3□□□□□ -1.24
LINC00517-202ENST00000554257 GAD1Q99259 594 aa7.3□□□□□ -1.24
LINC00517-202ENST00000554257 RTP3Q9BQQ7 232 aa7.3□□□□□ -1.24
LINC00517-202ENST00000554257 ADPGKQ9BRR6 497 aa7.3□□□□□ -1.24
LINC00517-202ENST00000554257 RSAD1Q9HA92 442 aa7.3□□□□□ -1.24
LINC00517-202ENST00000554257 TBC1D13Q9NVG8 400 aa7.3□□□□□ -1.24
LINC00517-202ENST00000554257 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.3□□□□□ -1.24
LINC00517-202ENST00000554257 CEP72Q9P209 647 aa7.3□□□□□ -1.24
LINC00517-202ENST00000554257 FHOD1Q9Y613 1164 aa7.3□□□□□ -1.24
LINC00517-202ENST00000554257 PRUNE2Q8WUY3 3088 aa7.3□□□□□ -1.24
LINC00517-202ENST00000554257 NUP210Q8TEM1 1887 aaPredicted RBP7.3□□□□□ -1.24
LINC00517-202ENST00000554257 GOLGA6L19H0YKK7 550 aa7.29□□□□□ -1.24
LINC00517-202ENST00000554257 M0QZQ0 153 aa7.29□□□□□ -1.24
LINC00517-202ENST00000554257 ACRP10323 421 aa7.29□□□□□ -1.24
LINC00517-202ENST00000554257 HARSP12081 509 aaKnown RBP7.29□□□□□ -1.24
LINC00517-202ENST00000554257 ITGA4P13612 1032 aa7.29□□□□□ -1.24
LINC00517-202ENST00000554257 MTIF2P46199 727 aaKnown RBP7.29□□□□□ -1.24
LINC00517-202ENST00000554257 SCNN1GP51170 649 aa7.29□□□□□ -1.24
LINC00517-202ENST00000554257 FPGSQ05932 587 aa7.29□□□□□ -1.24
LINC00517-202ENST00000554257 INCA1Q0VD86 236 aa7.29□□□□□ -1.24
LINC00517-202ENST00000554257 NFX1Q12986 1120 aaKnown RBP7.29□□□□□ -1.24
LINC00517-202ENST00000554257 SPOPLQ6IQ16 392 aa7.29□□□□□ -1.24
LINC00517-202ENST00000554257 TMCO2Q7Z6W1 182 aaPredicted RBP7.29□□□□□ -1.24
LINC00517-202ENST00000554257 DEFB128Q7Z7B8 93 aa7.29□□□□□ -1.24
LINC00517-202ENST00000554257 TMEM199Q8N511 208 aa7.29□□□□□ -1.24
LINC00517-202ENST00000554257 DDX1Q92499 740 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms