RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 MXRA7P84157 204 aa6.22□□□□□ -1.41
HMGB1P38-201ENST00000490557 RABL3Q5HYI8 236 aa6.22□□□□□ -1.41
HMGB1P38-201ENST00000490557 RNF207Q6ZRF8 634 aa6.22□□□□□ -1.41
HMGB1P38-201ENST00000490557 DAAM2Q86T65 1068 aa6.22□□□□□ -1.41
HMGB1P38-201ENST00000490557 TAAR9Q96RI9 348 aa6.22□□□□□ -1.41
HMGB1P38-201ENST00000490557 WDCPQ9H6R7 721 aa6.22□□□□□ -1.41
HMGB1P38-201ENST00000490557 FBXO34Q9NWN3 711 aa6.22□□□□□ -1.41
HMGB1P38-201ENST00000490557 ATP11BQ9Y2G3 1177 aa6.22□□□□□ -1.41
HMGB1P38-201ENST00000490557 STXBP5LQ9Y2K9 1186 aa6.22□□□□□ -1.41
HMGB1P38-201ENST00000490557 USP15Q9Y4E8 981 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P38-201ENST00000490557 NR2E3Q9Y5X4 410 aa6.22□□□□□ -1.41
HMGB1P38-201ENST00000490557 CDHR4A6H8M9 788 aa6.21□□□□□ -1.42
HMGB1P38-201ENST00000490557 H3BML4 177 aa6.21□□□□□ -1.42
HMGB1P38-201ENST00000490557 LEFTY2O00292 366 aa6.21□□□□□ -1.42
HMGB1P38-201ENST00000490557 SNAPC2Q13487 334 aa6.21□□□□□ -1.42
HMGB1P38-201ENST00000490557 CDSNQ15517 529 aa6.21□□□□□ -1.42
HMGB1P38-201ENST00000490557 FLYWCH1Q4VC44 716 aa6.21□□□□□ -1.42
HMGB1P38-201ENST00000490557 HSP90AB2PQ58FF8 381 aa6.21□□□□□ -1.42
HMGB1P38-201ENST00000490557 C14orf80Q86SX3 495 aa6.21□□□□□ -1.42
HMGB1P38-201ENST00000490557 DCBLD1Q8N8Z6 715 aa6.21□□□□□ -1.42
HMGB1P38-201ENST00000490557 ZBTB34Q8NCN2 500 aa6.21□□□□□ -1.42
HMGB1P38-201ENST00000490557 IL17RDQ8NFM7 739 aa6.21□□□□□ -1.42
HMGB1P38-201ENST00000490557 IL17DQ8TAD2 202 aa6.21□□□□□ -1.42
HMGB1P38-201ENST00000490557 TBC1D15Q8TC07 691 aa6.21□□□□□ -1.42
HMGB1P38-201ENST00000490557 DMRTA2Q96SC8 542 aa6.21□□□□□ -1.42
HMGB1P38-201ENST00000490557 CGRRF1Q99675 332 aa6.21□□□□□ -1.42
HMGB1P38-201ENST00000490557 ACO2Q99798 780 aaKnown RBP6.21□□□□□ -1.42
HMGB1P38-201ENST00000490557 SLAMF7Q9NQ25 335 aa6.21□□□□□ -1.42
HMGB1P38-201ENST00000490557 CNNM1Q9NRU3 951 aa6.21□□□□□ -1.42
HMGB1P38-201ENST00000490557 C1orf112Q9NSG2 853 aa6.21□□□□□ -1.42
HMGB1P38-201ENST00000490557 FAM30AQ9NZY2 134 aa6.21□□□□□ -1.42
HMGB1P38-201ENST00000490557 VSTM5A8MXK1 200 aa6.2□□□□□ -1.42
HMGB1P38-201ENST00000490557 MARCH6O60337 910 aa6.2□□□□□ -1.42
HMGB1P38-201ENST00000490557 ALDH2P05091 517 aa6.2□□□□□ -1.42
HMGB1P38-201ENST00000490557 MYBP10242 640 aa6.2□□□□□ -1.42
HMGB1P38-201ENST00000490557 SLC6A2P23975 617 aa6.2□□□□□ -1.42
HMGB1P38-201ENST00000490557 HTR1BP28222 390 aa6.2□□□□□ -1.42
HMGB1P38-201ENST00000490557 CSRP2Q16527 193 aa6.2□□□□□ -1.42
HMGB1P38-201ENST00000490557 LCE4AQ5TA78 99 aa6.2□□□□□ -1.42
HMGB1P38-201ENST00000490557 TSHZ3Q63HK5 1081 aa6.2□□□□□ -1.42
HMGB1P38-201ENST00000490557 FOXR2Q6PJQ5 311 aa6.2□□□□□ -1.42
HMGB1P38-201ENST00000490557 GDF7Q7Z4P5 450 aa6.2□□□□□ -1.42
HMGB1P38-201ENST00000490557 SPRED1Q7Z699 444 aa6.2□□□□□ -1.42
HMGB1P38-201ENST00000490557 SYT12Q8IV01 421 aa6.2□□□□□ -1.42
HMGB1P38-201ENST00000490557 KLHDC4Q8TBB5 520 aa6.2□□□□□ -1.42
HMGB1P38-201ENST00000490557 TNPO1Q92973 898 aaKnown RBP6.2□□□□□ -1.42
HMGB1P38-201ENST00000490557 SLC35A4Q96G79 324 aa6.2□□□□□ -1.42
HMGB1P38-201ENST00000490557 ZNF341Q9BYN7 854 aa6.2□□□□□ -1.42
HMGB1P38-201ENST00000490557 KRTAP9-9Q9BYP9 154 aa6.2□□□□□ -1.42
HMGB1P38-201ENST00000490557 KRTAP9-4Q9BYQ2 154 aa6.2□□□□□ -1.42
HMGB1P38-201ENST00000490557 BRD9Q9H8M2 597 aa6.2□□□□□ -1.42
HMGB1P38-201ENST00000490557 FAM204AQ9H8W3 233 aa6.2□□□□□ -1.42
HMGB1P38-201ENST00000490557 SARS2Q9NP81 518 aaKnown RBP6.2□□□□□ -1.42
HMGB1P38-201ENST00000490557 PNPOQ9NVS9 261 aa6.2□□□□□ -1.42
HMGB1P38-201ENST00000490557 SIDT1Q9NXL6 827 aaKnown RBP6.2□□□□□ -1.42
HMGB1P38-201ENST00000490557 JKAMPQ9P055 326 aa6.2□□□□□ -1.42
HMGB1P38-201ENST00000490557 C1QTNF3-AMACRE9PGA6 284 aa6.19□□□□□ -1.42
HMGB1P38-201ENST00000490557 F2RL2O00254 374 aa6.19□□□□□ -1.42
HMGB1P38-201ENST00000490557 RPS6KA4O75676 772 aa6.19□□□□□ -1.42
HMGB1P38-201ENST00000490557 UBXN7O94888 489 aa6.19□□□□□ -1.42
HMGB1P38-201ENST00000490557 HLA-DOAP06340 250 aa6.19□□□□□ -1.42
HMGB1P38-201ENST00000490557 CKBP12277 381 aa6.19□□□□□ -1.42
HMGB1P38-201ENST00000490557 TYRP14679 529 aa6.19□□□□□ -1.42
HMGB1P38-201ENST00000490557 BUD31P41223 144 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P38-201ENST00000490557 PIK3CGP48736 1102 aa6.19□□□□□ -1.42
HMGB1P38-201ENST00000490557 TOB2Q14106 344 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P38-201ENST00000490557 CCDC93Q567U6 631 aa6.19□□□□□ -1.42
HMGB1P38-201ENST00000490557 UTP14CQ5TAP6 766 aaKnown RBP6.19□□□□□ -1.42
HMGB1P38-201ENST00000490557 B3GNT9Q6UX72 402 aa6.19□□□□□ -1.42
HMGB1P38-201ENST00000490557 ZNF365Q70YC5 407 aa6.19□□□□□ -1.42
HMGB1P38-201ENST00000490557 RHOT2Q8IXI1 618 aa6.19□□□□□ -1.42
HMGB1P38-201ENST00000490557 SYNE4Q8N205 404 aa6.19□□□□□ -1.42
HMGB1P38-201ENST00000490557 ZNF276Q8N554 614 aa6.19□□□□□ -1.42
HMGB1P38-201ENST00000490557 TTC8Q8TAM2 541 aa6.19□□□□□ -1.42
HMGB1P38-201ENST00000490557 PPP1R35Q8TAP8 253 aa6.19□□□□□ -1.42
HMGB1P38-201ENST00000490557 BRIX1Q8TDN6 353 aaKnown RBP6.19□□□□□ -1.42
HMGB1P38-201ENST00000490557 RNPEPQ9H4A4 650 aa6.19□□□□□ -1.42
HMGB1P38-201ENST00000490557 ARMT1Q9H993 441 aa6.19□□□□□ -1.42
HMGB1P38-201ENST00000490557 PRDM11Q9NQV5 511 aa6.19□□□□□ -1.42
HMGB1P38-201ENST00000490557 CFAP97Q9P2B7 532 aa6.19□□□□□ -1.42
HMGB1P38-201ENST00000490557 REXO2Q9Y3B8 237 aaKnown RBP6.19□□□□□ -1.42
HMGB1P38-201ENST00000490557 RNASET2O00584 256 aaKnown RBP6.18□□□□□ -1.42
HMGB1P38-201ENST00000490557 SLC43A1O75387 559 aa6.18□□□□□ -1.42
HMGB1P38-201ENST00000490557 ERN1O75460 977 aaKnown RBP6.18□□□□□ -1.42
HMGB1P38-201ENST00000490557 AGFG2O95081 481 aa6.18□□□□□ -1.42
HMGB1P38-201ENST00000490557 GNAI2P04899 355 aa6.18□□□□□ -1.42
HMGB1P38-201ENST00000490557 SBK3P0C264 359 aa6.18□□□□□ -1.42
HMGB1P38-201ENST00000490557 INSRRP14616 1297 aa6.18□□□□□ -1.42
HMGB1P38-201ENST00000490557 FAM102AQ5T9C2 384 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P38-201ENST00000490557 OR56A1Q8NGH5 318 aa6.18□□□□□ -1.42
HMGB1P38-201ENST00000490557 NUP133Q8WUM0 1156 aa6.18□□□□□ -1.42
HMGB1P38-201ENST00000490557 SLC25A43Q8WUT9 341 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P38-201ENST00000490557 RUNDC1Q96C34 613 aa6.18□□□□□ -1.42
HMGB1P38-201ENST00000490557 SLC46A2Q9BY10 475 aa6.18□□□□□ -1.42
HMGB1P38-201ENST00000490557 ZNF703Q9H7S9 590 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P38-201ENST00000490557 RNF181Q9P0P0 153 aa6.18□□□□□ -1.42
HMGB1P38-201ENST00000490557 PCDHA1Q9Y5I3 950 aa6.18□□□□□ -1.42
HMGB1P38-201ENST00000490557 NT5C1B-RDH14C9J2C7 533 aa6.17□□□□□ -1.42
HMGB1P38-201ENST00000490557 B3GALT2O43825 422 aa6.17□□□□□ -1.42
HMGB1P38-201ENST00000490557 PPFIA4O75335 1185 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms