RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 VN1R3Q9BXE9 311 aa11.74□□□□□ -0.53
ATG4B-219ENST00000479941 ZBP1Q9H171 429 aa11.74□□□□□ -0.53
ATG4B-219ENST00000479941 NUP62CLQ9H1M0 184 aa11.74□□□□□ -0.53
ATG4B-219ENST00000479941 ENTPD7Q9NQZ7 604 aa11.74□□□□□ -0.53
ATG4B-219ENST00000479941 DMAC2Q9NW81 257 aa11.74□□□□□ -0.53
ATG4B-219ENST00000479941 CACNG4Q9UBN1 327 aa11.74□□□□□ -0.53
ATG4B-219ENST00000479941 TUBGCP4Q9UGJ1 667 aa11.74□□□□□ -0.53
ATG4B-219ENST00000479941 SSX2IPQ9Y2D8 614 aa11.74□□□□□ -0.53
ATG4B-219ENST00000479941 IRAK3Q9Y616 596 aa11.74□□□□□ -0.53
ATG4B-219ENST00000479941 SF3B1O75533 1304 aaKnown RBP eCLIP11.74□□□□□ -0.53
ATG4B-219ENST00000479941 PLXNA4Q9HCM2 1894 aa11.74□□□□□ -0.53
ATG4B-219ENST00000479941 F8W810 466 aa11.73□□□□□ -0.53
ATG4B-219ENST00000479941 PSMA7O14818 248 aa11.73□□□□□ -0.53
ATG4B-219ENST00000479941 NCK2O43639 380 aa11.73□□□□□ -0.53
ATG4B-219ENST00000479941 CSPG5O95196 566 aa11.73□□□□□ -0.53
ATG4B-219ENST00000479941 NR3C1P04150 777 aa11.73□□□□□ -0.53
ATG4B-219ENST00000479941 PAX3P23760 479 aa11.73□□□□□ -0.53
ATG4B-219ENST00000479941 EDRF1Q3B7T1 1238 aa11.73□□□□□ -0.53
ATG4B-219ENST00000479941 USP41Q3LFD5 358 aa11.73□□□□□ -0.53
ATG4B-219ENST00000479941 ZCWPW2Q504Y3 356 aa11.73□□□□□ -0.53
ATG4B-219ENST00000479941 ISM2Q6H9L7 571 aa11.73□□□□□ -0.53
ATG4B-219ENST00000479941 CENPPQ6IPU0 288 aa11.73□□□□□ -0.53
ATG4B-219ENST00000479941 GPR65Q8IYL9 337 aa11.73□□□□□ -0.53
ATG4B-219ENST00000479941 MRPL43Q8N983 215 aaKnown RBP11.73□□□□□ -0.53
ATG4B-219ENST00000479941 RDH13Q8NBN7 331 aa11.73□□□□□ -0.53
ATG4B-219ENST00000479941 GPT2Q8TD30 523 aa11.73□□□□□ -0.53
ATG4B-219ENST00000479941 DHTKD1Q96HY7 919 aaPredicted RBP11.73□□□□□ -0.53
ATG4B-219ENST00000479941 TSG101Q99816 390 aa11.73□□□□□ -0.53
ATG4B-219ENST00000479941 HERC2P3Q9BVR0 1158 aa11.73□□□□□ -0.53
ATG4B-219ENST00000479941 GPR62Q9BZJ7 368 aa11.73□□□□□ -0.53
ATG4B-219ENST00000479941 PDE11AQ9HCR9 933 aa11.73□□□□□ -0.53
ATG4B-219ENST00000479941 CHST7Q9NS84 486 aa11.73□□□□□ -0.53
ATG4B-219ENST00000479941 FRMD4BQ9Y2L6 1034 aa11.73□□□□□ -0.53
ATG4B-219ENST00000479941 FSD2A1L4K1 749 aa11.72□□□□□ -0.53
ATG4B-219ENST00000479941 TULP1O00294 542 aaPredicted RBP11.72□□□□□ -0.53
ATG4B-219ENST00000479941 BIN1O00499 593 aa11.72□□□□□ -0.53
ATG4B-219ENST00000479941 MAPK13O15264 365 aa11.72□□□□□ -0.53
ATG4B-219ENST00000479941 CXCL14O95715 111 aa11.72□□□□□ -0.53
ATG4B-219ENST00000479941 URODP06132 367 aa11.72□□□□□ -0.53
ATG4B-219ENST00000479941 BMP6P22004 513 aa11.72□□□□□ -0.53
ATG4B-219ENST00000479941 NR2F2P24468 414 aa11.72□□□□□ -0.53
ATG4B-219ENST00000479941 CCNE1P24864 410 aa11.72□□□□□ -0.53
ATG4B-219ENST00000479941 MCM4P33991 863 aa11.72□□□□□ -0.53
ATG4B-219ENST00000479941 GLUD2P49448 558 aa11.72□□□□□ -0.53
ATG4B-219ENST00000479941 WNT7BP56706 349 aa11.72□□□□□ -0.53
ATG4B-219ENST00000479941 TFAMQ00059 246 aaKnown RBP11.72□□□□□ -0.53
ATG4B-219ENST00000479941 LRRC63Q05C16 580 aa11.72□□□□□ -0.53
ATG4B-219ENST00000479941 CYP24A1Q07973 514 aa11.72□□□□□ -0.53
ATG4B-219ENST00000479941 ADAM9Q13443 819 aa11.72□□□□□ -0.53
ATG4B-219ENST00000479941 PSMD6Q15008 389 aa11.72□□□□□ -0.53
ATG4B-219ENST00000479941 CCDC85BQ15834 202 aaPredicted RBP11.72□□□□□ -0.53
ATG4B-219ENST00000479941 TCEAL5Q5H9L2 206 aa11.72□□□□□ -0.53
ATG4B-219ENST00000479941 PLPP4Q5VZY2 271 aa11.72□□□□□ -0.53
ATG4B-219ENST00000479941 KIAA1841Q6NSI8 718 aa11.72□□□□□ -0.53
ATG4B-219ENST00000479941 CD300LGQ6UXG3 332 aa11.72□□□□□ -0.53
ATG4B-219ENST00000479941 TAS1R1Q7RTX1 841 aa11.72□□□□□ -0.53
ATG4B-219ENST00000479941 WDR49Q8IV35 697 aa11.72□□□□□ -0.53
ATG4B-219ENST00000479941 EFCAB13Q8IY85 973 aa11.72□□□□□ -0.53
ATG4B-219ENST00000479941 C3orf58Q8NDZ4 430 aa11.72□□□□□ -0.53
ATG4B-219ENST00000479941 HASPINQ8TF76 798 aa11.72□□□□□ -0.53
ATG4B-219ENST00000479941 PPM1EQ8WY54 764 aa11.72□□□□□ -0.53
ATG4B-219ENST00000479941 ANKRD36BP1Q96IX9 119 aa11.72□□□□□ -0.53
ATG4B-219ENST00000479941 MFSD14AQ96MC6 490 aa11.72□□□□□ -0.53
ATG4B-219ENST00000479941 FNBP1Q96RU3 617 aa11.72□□□□□ -0.53
ATG4B-219ENST00000479941 CDCA3Q99618 268 aaPredicted RBP11.72□□□□□ -0.53
ATG4B-219ENST00000479941 MRPL17Q9NRX2 175 aaKnown RBP11.72□□□□□ -0.53
ATG4B-219ENST00000479941 DPP3Q9NY33 737 aa11.72□□□□□ -0.53
ATG4B-219ENST00000479941 NUB1Q9Y5A7 615 aa11.72□□□□□ -0.53
ATG4B-219ENST00000479941 PDCD11Q14690 1871 aaKnown RBP11.72□□□□□ -0.53
ATG4B-219ENST00000479941 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.71□□□□□ -0.53
ATG4B-219ENST00000479941 C2orf71A6NGG8 1288 aa11.71□□□□□ -0.53
ATG4B-219ENST00000479941 HIDE1A8MVS5 230 aa11.71□□□□□ -0.53
ATG4B-219ENST00000479941 PPP1R3GB7ZBB8 358 aa11.71□□□□□ -0.53
ATG4B-219ENST00000479941 PIRO00625 290 aa11.71□□□□□ -0.53
ATG4B-219ENST00000479941 CETN3O15182 167 aa11.71□□□□□ -0.53
ATG4B-219ENST00000479941 TMEM191BP0C7N4 346 aa11.71□□□□□ -0.53
ATG4B-219ENST00000479941 CA8P35219 290 aa11.71□□□□□ -0.53
ATG4B-219ENST00000479941 DSG1Q02413 1049 aa11.71□□□□□ -0.53
ATG4B-219ENST00000479941 PTPN14Q15678 1187 aa11.71□□□□□ -0.53
ATG4B-219ENST00000479941 DUOXA2Q1HG44 320 aa11.71□□□□□ -0.53
ATG4B-219ENST00000479941 FAM171A1Q5VUB5 890 aa11.71□□□□□ -0.53
ATG4B-219ENST00000479941 KIAA0319Q5VV43 1072 aa11.71□□□□□ -0.53
ATG4B-219ENST00000479941 C9orf57Q5W0N0 161 aa11.71□□□□□ -0.53
ATG4B-219ENST00000479941 CEP135Q66GS9 1140 aa11.71□□□□□ -0.53
ATG4B-219ENST00000479941 PDXDC1Q6P996 788 aa11.71□□□□□ -0.53
ATG4B-219ENST00000479941 FOXR2Q6PJQ5 311 aa11.71□□□□□ -0.53
ATG4B-219ENST00000479941 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.71□□□□□ -0.53
ATG4B-219ENST00000479941 USP37Q86T82 979 aa11.71□□□□□ -0.53
ATG4B-219ENST00000479941 CCDC127Q96BQ5 260 aa11.71□□□□□ -0.53
ATG4B-219ENST00000479941 TTPALQ9BTX7 342 aa11.71□□□□□ -0.53
ATG4B-219ENST00000479941 TLE6Q9H808 572 aa11.71□□□□□ -0.53
ATG4B-219ENST00000479941 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.71□□□□□ -0.53
ATG4B-219ENST00000479941 INTS13Q9NVM9 706 aa11.71□□□□□ -0.53
ATG4B-219ENST00000479941 ITGA11Q9UKX5 1188 aa11.71□□□□□ -0.53
ATG4B-219ENST00000479941 PCDHGC5Q9Y5F6 944 aa11.71□□□□□ -0.53
ATG4B-219ENST00000479941 UNC80Q8N2C7 3258 aa11.71□□□□□ -0.54
ATG4B-219ENST00000479941 ANK1P16157 1881 aa11.7□□□□□ -0.54
ATG4B-219ENST00000479941 ANO9A1A5B4 782 aa11.7□□□□□ -0.54
ATG4B-219ENST00000479941 BICDL2A1A5D9 508 aa11.7□□□□□ -0.54
ATG4B-219ENST00000479941 SYN3O14994 580 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms