RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 SP3Q02447 781 aa6.08□□□□□ -1.44
VPS41-211ENST00000466017 ARHGEF6Q15052 776 aa6.08□□□□□ -1.44
VPS41-211ENST00000466017 STX1AQ16623 288 aa6.08□□□□□ -1.44
VPS41-211ENST00000466017 CELF3Q5SZQ8 465 aaKnown RBP6.08□□□□□ -1.44
VPS41-211ENST00000466017 ZNF658Q5TYW1 1059 aaPredicted RBP6.08□□□□□ -1.44
VPS41-211ENST00000466017 NCAPH2Q6IBW4 605 aa6.08□□□□□ -1.44
VPS41-211ENST00000466017 FBXL19Q6PCT2 694 aa6.08□□□□□ -1.44
VPS41-211ENST00000466017 UNC13DQ70J99 1090 aa6.08□□□□□ -1.44
VPS41-211ENST00000466017 ARMCX2Q7L311 632 aa6.08□□□□□ -1.44
VPS41-211ENST00000466017 OTUD6AQ7L8S5 288 aa6.08□□□□□ -1.44
VPS41-211ENST00000466017 PLPPR4Q7Z2D5 763 aa6.08□□□□□ -1.44
VPS41-211ENST00000466017 ERMP1Q7Z2K6 904 aa6.08□□□□□ -1.44
VPS41-211ENST00000466017 NPLOC4Q8TAT6 608 aa6.08□□□□□ -1.44
VPS41-211ENST00000466017 SCFD2Q8WU76 684 aa6.08□□□□□ -1.44
VPS41-211ENST00000466017 BCL7CQ8WUZ0 217 aaPredicted RBP6.08□□□□□ -1.44
VPS41-211ENST00000466017 ATP6V0A1Q93050 837 aa6.08□□□□□ -1.44
VPS41-211ENST00000466017 CCDC47Q96A33 483 aaKnown RBP6.08□□□□□ -1.44
VPS41-211ENST00000466017 DNAJC19Q96DA6 116 aa6.08□□□□□ -1.44
VPS41-211ENST00000466017 DYDC2Q96IM9 177 aa6.08□□□□□ -1.44
VPS41-211ENST00000466017 TMEM74Q96NL1 305 aa6.08□□□□□ -1.44
VPS41-211ENST00000466017 TINF2Q9BSI4 451 aa6.08□□□□□ -1.44
VPS41-211ENST00000466017 NAT10Q9H0A0 1025 aaKnown RBP6.08□□□□□ -1.44
VPS41-211ENST00000466017 MIR1-1HGQ9H1L0 117 aa6.08□□□□□ -1.44
VPS41-211ENST00000466017 PAK6Q9NQU5 681 aaPredicted RBP6.08□□□□□ -1.44
VPS41-211ENST00000466017 SLC9A2Q9UBY0 812 aa6.08□□□□□ -1.44
VPS41-211ENST00000466017 MAN1B1Q9UKM7 699 aa6.08□□□□□ -1.44
VPS41-211ENST00000466017 DOCK3Q8IZD9 2030 aa6.08□□□□□ -1.44
VPS41-211ENST00000466017 KIAA1217Q5T5P2 1943 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 GSTTP1A0A1W2PQM5 241 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 GOLGA6L3A6NEY3 463 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 MYMKA6NI61 221 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 SMTNL1A8MU46 457 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 IKBKBO14920 756 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 PPFIA4O75335 1185 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 CILPO75339 1184 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 CCNE2O96020 404 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 RPN1P04843 607 aaKnown RBP6.07□□□□□ -1.44
VPS41-211ENST00000466017 SUPT20HL2P0C7V6 817 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 CYP11B2P19099 503 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 ITIH2P19823 946 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 SCP2P22307 547 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 GUCY2CP25092 1073 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 AFMP43652 599 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 ACTR2P61160 394 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 ETF1P62495 437 aaKnown RBP6.07□□□□□ -1.44
VPS41-211ENST00000466017 LACTBP83111 547 aaPredicted RBP6.07□□□□□ -1.44
VPS41-211ENST00000466017 PNOCQ13519 176 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 CUL4BQ13620 913 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 ACVR2BQ13705 512 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 KIF22Q14807 665 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 IQCB1Q15051 598 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 NKPD1Q17RQ9 610 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 CYP27C1Q4G0S4 372 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 DUSP28Q4G0W2 176 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 XKR3Q5GH77 459 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 L1TD1Q5T7N2 865 aaKnown RBP6.07□□□□□ -1.44
VPS41-211ENST00000466017 WDR78Q5VTH9 848 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 PRAMEF13Q5VWM6 474 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 SCARA3Q6AZY7 606 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 RINT1Q6NUQ1 792 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 MIS18BP1Q6P0N0 1132 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 SEPT14Q6ZU15 432 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 C1orf186Q6ZWK4 172 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 KCNK18Q7Z418 384 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 CCDC65Q8IXS2 484 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 CKAP2LQ8IYA6 745 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 EXOC8Q8IYI6 725 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 RASSF8Q8NHQ8 419 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 GIMAP7Q8NHV1 300 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 ENOX1Q8TC92 643 aaKnown RBP6.07□□□□□ -1.44
VPS41-211ENST00000466017 ZNF507Q8TCN5 953 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 GJA10Q969M2 543 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 ACSF2Q96CM8 615 aaPredicted RBP6.07□□□□□ -1.44
VPS41-211ENST00000466017 NTPCRQ9BSD7 190 aaKnown RBP6.07□□□□□ -1.44
VPS41-211ENST00000466017 RSRP1Q9BUV0 290 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 C17orf75Q9HAS0 396 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 PDLIM7Q9NR12 457 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 NRBP2Q9NSY0 501 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 RNF186Q9NXI6 227 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 RGL1Q9NZL6 768 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 SEL1LQ9UBV2 794 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 ADGRE2Q9UHX3 823 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 ODF2LQ9ULJ1 636 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 SRCAPQ6ZRS2 3230 aa6.07□□□□□ -1.44
VPS41-211ENST00000466017 LOXHD1Q8IVV2 1947 aa6.06□□□□□ -1.44
VPS41-211ENST00000466017 WASH4PA8MWX3 477 aa6.06□□□□□ -1.44
VPS41-211ENST00000466017 E9PMD0 336 aa6.06□□□□□ -1.44
VPS41-211ENST00000466017 TNPO2O14787 897 aaKnown RBP6.06□□□□□ -1.44
VPS41-211ENST00000466017 FOXN1O15353 648 aa6.06□□□□□ -1.44
VPS41-211ENST00000466017 TLR3O15455 904 aaKnown RBP6.06□□□□□ -1.44
VPS41-211ENST00000466017 KIF20AO95235 890 aa6.06□□□□□ -1.44
VPS41-211ENST00000466017 GGPS1O95749 300 aa6.06□□□□□ -1.44
VPS41-211ENST00000466017 GH1P01241 217 aa6.06□□□□□ -1.44
VPS41-211ENST00000466017 ZNF865P0CJ78 1059 aaPredicted RBP6.06□□□□□ -1.44
VPS41-211ENST00000466017 TXNP10599 105 aaKnown RBP6.06□□□□□ -1.44
VPS41-211ENST00000466017 CD8BP10966 210 aa6.06□□□□□ -1.44
VPS41-211ENST00000466017 UBA1P22314 1058 aaKnown RBP6.06□□□□□ -1.44
VPS41-211ENST00000466017 PSMC4P43686 418 aa6.06□□□□□ -1.44
VPS41-211ENST00000466017 RARRES1P49788 294 aa6.06□□□□□ -1.44
VPS41-211ENST00000466017 ZNF165P49910 485 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms