RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 IL23AQ9NPF7 189 aa22.75■■□□□ 1.23
VPS13B-204ENST00000441350 RNF19AQ9NV58 838 aa22.75■■□□□ 1.23
VPS13B-204ENST00000441350 DPP3Q9NY33 737 aa22.75■■□□□ 1.23
VPS13B-204ENST00000441350 UBQLN1Q9UMX0 589 aaKnown RBP22.75■■□□□ 1.23
VPS13B-204ENST00000441350 PLAGL2Q9UPG8 496 aa22.75■■□□□ 1.23
VPS13B-204ENST00000441350 OFD1O75665 1012 aa22.74■■□□□ 1.23
VPS13B-204ENST00000441350 CST3P01034 146 aaPredicted RBP22.74■■□□□ 1.23
VPS13B-204ENST00000441350 TRIM21P19474 475 aaKnown RBP22.74■■□□□ 1.23
VPS13B-204ENST00000441350 PIK3CAP42336 1068 aa22.74■■□□□ 1.23
VPS13B-204ENST00000441350 C18orf25Q96B23 403 aaPredicted RBP22.74■■□□□ 1.23
VPS13B-204ENST00000441350 MIOSQ9NXC5 875 aa22.74■■□□□ 1.23
VPS13B-204ENST00000441350 PCDH10Q9P2E7 1040 aa22.74■■□□□ 1.23
VPS13B-204ENST00000441350 ABHD14A-ACY1A0A1B0GW23 586 aa22.73■■□□□ 1.23
VPS13B-204ENST00000441350 EVI5O60447 810 aa22.73■■□□□ 1.23
VPS13B-204ENST00000441350 CYP3A5P20815 502 aa22.73■■□□□ 1.23
VPS13B-204ENST00000441350 IBSPP21815 317 aaPredicted RBP22.73■■□□□ 1.23
VPS13B-204ENST00000441350 GUCY2FP51841 1108 aa22.73■■□□□ 1.23
VPS13B-204ENST00000441350 NAB2Q15742 525 aa22.73■■□□□ 1.23
VPS13B-204ENST00000441350 CLLU1OSQ5K130 101 aa22.73■■□□□ 1.23
VPS13B-204ENST00000441350 PPFIBP1Q86W92 1011 aa22.73■■□□□ 1.23
VPS13B-204ENST00000441350 TMEM130Q8N3G9 435 aa22.73■■□□□ 1.23
VPS13B-204ENST00000441350 BEST2Q8NFU1 509 aa22.73■■□□□ 1.23
VPS13B-204ENST00000441350 RPS6KC1Q96S38 1066 aa22.73■■□□□ 1.23
VPS13B-204ENST00000441350 EDEM3Q9BZQ6 932 aa22.73■■□□□ 1.23
VPS13B-204ENST00000441350 APEX2Q9UBZ4 518 aa22.73■■□□□ 1.23
VPS13B-204ENST00000441350 TUBGCP4Q9UGJ1 667 aa22.73■■□□□ 1.23
VPS13B-204ENST00000441350 FBXL5Q9UKA1 691 aa22.73■■□□□ 1.23
VPS13B-204ENST00000441350 ITGA11Q9UKX5 1188 aa22.73■■□□□ 1.23
VPS13B-204ENST00000441350 CAPN11Q9UMQ6 739 aa22.73■■□□□ 1.23
VPS13B-204ENST00000441350 PCDHB7Q9Y5E2 793 aa22.73■■□□□ 1.23
VPS13B-204ENST00000441350 A0A1W2PQJ5 194 aa22.72■■□□□ 1.23
VPS13B-204ENST00000441350 RNF225M0QZC1 329 aaPredicted RBP22.72■■□□□ 1.23
VPS13B-204ENST00000441350 XPOTO43592 962 aaKnown RBP22.72■■□□□ 1.23
VPS13B-204ENST00000441350 ZC3H11AO75152 810 aaKnown RBP eCLIP22.72■■□□□ 1.23
VPS13B-204ENST00000441350 ITGB3P05106 788 aa22.72■■□□□ 1.23
VPS13B-204ENST00000441350 PHLDB3Q6NSJ2 640 aa22.72■■□□□ 1.23
VPS13B-204ENST00000441350 BADQ92934 168 aa22.72■■□□□ 1.23
VPS13B-204ENST00000441350 PI4K2AQ9BTU6 479 aa22.72■■□□□ 1.23
VPS13B-204ENST00000441350 ASS1P00966 412 aaKnown RBP22.71■■□□□ 1.23
VPS13B-204ENST00000441350 THP07101 528 aa22.71■■□□□ 1.23
VPS13B-204ENST00000441350 UCHL3P15374 230 aa22.71■■□□□ 1.23
VPS13B-204ENST00000441350 FXR1P51114 621 aaKnown RBP eCLIP22.71■■□□□ 1.23
VPS13B-204ENST00000441350 SCNN1GP51170 649 aa22.71■■□□□ 1.23
VPS13B-204ENST00000441350 MYL6P60660 151 aa22.71■■□□□ 1.23
VPS13B-204ENST00000441350 SOX4Q06945 474 aaPredicted RBP22.71■■□□□ 1.23
VPS13B-204ENST00000441350 PPIGQ13427 754 aaKnown RBP eCLIP22.71■■□□□ 1.232e-6■■■□□ 15
VPS13B-204ENST00000441350 TRPC3Q13507 836 aa22.71■■□□□ 1.23
VPS13B-204ENST00000441350 GLB1LQ6UWU2 654 aa22.71■■□□□ 1.23
VPS13B-204ENST00000441350 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.71■■□□□ 1.23
VPS13B-204ENST00000441350 C16orf59Q7L2K0 433 aa22.71■■□□□ 1.23
VPS13B-204ENST00000441350 NAA15Q9BXJ9 866 aaKnown RBP22.71■■□□□ 1.23
VPS13B-204ENST00000441350 XYLT2Q9H1B5 865 aa22.71■■□□□ 1.23
VPS13B-204ENST00000441350 SLC38A7Q9NVC3 462 aa22.71■■□□□ 1.23
VPS13B-204ENST00000441350 RNF216Q9NWF9 866 aaPredicted RBP22.71■■□□□ 1.23
VPS13B-204ENST00000441350 CEP72Q9P209 647 aa22.71■■□□□ 1.23
VPS13B-204ENST00000441350 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.71■■□□□ 1.23
VPS13B-204ENST00000441350 EFCAB14O75071 495 aa22.71■■□□□ 1.23
VPS13B-204ENST00000441350 ACRP10323 421 aa22.71■■□□□ 1.23
VPS13B-204ENST00000441350 FGFR1P11362 822 aa22.71■■□□□ 1.23
VPS13B-204ENST00000441350 CASP14P31944 242 aa22.71■■□□□ 1.23
VPS13B-204ENST00000441350 RBP5P82980 135 aa22.71■■□□□ 1.23
VPS13B-204ENST00000441350 FPGSQ05932 587 aa22.71■■□□□ 1.23
VPS13B-204ENST00000441350 SGSM1Q2NKQ1 1148 aa22.71■■□□□ 1.23
VPS13B-204ENST00000441350 NPAS4Q8IUM7 802 aa22.71■■□□□ 1.23
VPS13B-204ENST00000441350 TNS4Q8IZW8 715 aa22.71■■□□□ 1.23
VPS13B-204ENST00000441350 HELQQ8TDG4 1101 aa22.71■■□□□ 1.23
VPS13B-204ENST00000441350 CPLX3Q8WVH0 158 aa22.71■■□□□ 1.23
VPS13B-204ENST00000441350 NT5C1BQ96P26 610 aa22.71■■□□□ 1.23
VPS13B-204ENST00000441350 DAAM1Q9Y4D1 1078 aa22.71■■□□□ 1.23
VPS13B-204ENST00000441350 ANO9A1A5B4 782 aa22.7■■□□□ 1.22
VPS13B-204ENST00000441350 GOLGA6L6A8MZA4 724 aa22.7■■□□□ 1.22
VPS13B-204ENST00000441350 POLR2BP30876 1174 aaKnown RBP22.7■■□□□ 1.22
VPS13B-204ENST00000441350 POLR2FP61218 127 aaKnown RBP22.7■■□□□ 1.22
VPS13B-204ENST00000441350 LRMPQ12912 555 aa22.7■■□□□ 1.22
VPS13B-204ENST00000441350 WDR44Q5JSH3 913 aa22.7■■□□□ 1.22
VPS13B-204ENST00000441350 GJB7Q6PEY0 223 aa22.7■■□□□ 1.22
VPS13B-204ENST00000441350 CCDC186Q7Z3E2 898 aa22.7■■□□□ 1.22
VPS13B-204ENST00000441350 ARHGEF19Q8IW93 802 aa22.7■■□□□ 1.22
VPS13B-204ENST00000441350 BAP1Q92560 729 aa22.7■■□□□ 1.22
VPS13B-204ENST00000441350 TATDN2Q93075 761 aa22.7■■□□□ 1.22
VPS13B-204ENST00000441350 AJAP1Q9UKB5 411 aaPredicted RBP22.7■■□□□ 1.22
VPS13B-204ENST00000441350 LRFN2Q9ULH4 789 aa22.7■■□□□ 1.22
VPS13B-204ENST00000441350 AGAP1Q9UPQ3 857 aa22.7■■□□□ 1.22
VPS13B-204ENST00000441350 FHOD1Q9Y613 1164 aa22.7■■□□□ 1.22
VPS13B-204ENST00000441350 TDRD15B5MCY1 1934 aaKnown RBP22.69■■□□□ 1.22
VPS13B-204ENST00000441350 BAIAP3O94812 1187 aa22.69■■□□□ 1.22
VPS13B-204ENST00000441350 KRT19P08727 400 aa22.69■■□□□ 1.22
VPS13B-204ENST00000441350 TPM1P09493 284 aa22.69■■□□□ 1.22
VPS13B-204ENST00000441350 RFX1P22670 979 aa22.69■■□□□ 1.22
VPS13B-204ENST00000441350 LRPAP1P30533 357 aa22.69■■□□□ 1.22
VPS13B-204ENST00000441350 ATICP31939 592 aa22.69■■□□□ 1.22
VPS13B-204ENST00000441350 GRIK3Q13003 919 aa22.69■■□□□ 1.22
VPS13B-204ENST00000441350 C9orf57Q5W0N0 161 aa22.69■■□□□ 1.22
VPS13B-204ENST00000441350 IQCEQ6IPM2 695 aa22.69■■□□□ 1.22
VPS13B-204ENST00000441350 TC2NQ8N9U0 490 aa22.69■■□□□ 1.22
VPS13B-204ENST00000441350 TAF4BQ92750 862 aa22.69■■□□□ 1.22
VPS13B-204ENST00000441350 ELMO3Q96BJ8 720 aa22.69■■□□□ 1.22
VPS13B-204ENST00000441350 VRTNQ9H8Y1 702 aa22.69■■□□□ 1.22
VPS13B-204ENST00000441350 APOBEC3GQ9HC16 384 aaKnown RBP22.69■■□□□ 1.22
VPS13B-204ENST00000441350 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.69■■□□□ 1.221e-6■■■■■ 194.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms