RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 SPIRE1Q08AE8 756 aa5.8□□□□□ -1.48
ECHDC1-204ENST00000368292 PUM3Q15397 648 aaKnown RBP5.8□□□□□ -1.48
ECHDC1-204ENST00000368292 VWA3BQ502W6 1294 aa5.8□□□□□ -1.48
ECHDC1-204ENST00000368292 CCDC158Q5M9N0 1113 aa5.8□□□□□ -1.48
ECHDC1-204ENST00000368292 WDR45BQ5MNZ6 344 aa5.8□□□□□ -1.48
ECHDC1-204ENST00000368292 PPP4R3AQ6IN85 833 aa5.8□□□□□ -1.48
ECHDC1-204ENST00000368292 OTOP1Q7RTM1 612 aa5.8□□□□□ -1.48
ECHDC1-204ENST00000368292 ZNF354CQ86Y25 554 aa5.8□□□□□ -1.48
ECHDC1-204ENST00000368292 BRSK2Q8IWQ3 736 aa5.8□□□□□ -1.48
ECHDC1-204ENST00000368292 IFNL2Q8IZJ0 200 aa5.8□□□□□ -1.48
ECHDC1-204ENST00000368292 ARL6IP6Q8N6S5 226 aa5.8□□□□□ -1.48
ECHDC1-204ENST00000368292 LINC00482Q8N8I6 264 aa5.8□□□□□ -1.48
ECHDC1-204ENST00000368292 TTC8Q8TAM2 541 aa5.8□□□□□ -1.48
ECHDC1-204ENST00000368292 ZSCAN18Q8TBC5 510 aaPredicted RBP5.8□□□□□ -1.48
ECHDC1-204ENST00000368292 CENPTQ96BT3 561 aa5.8□□□□□ -1.48
ECHDC1-204ENST00000368292 PGBD4Q96DM1 585 aa5.8□□□□□ -1.48
ECHDC1-204ENST00000368292 SERINC2Q96SA4 455 aa5.8□□□□□ -1.48
ECHDC1-204ENST00000368292 GORASP1Q9BQQ3 440 aa5.8□□□□□ -1.48
ECHDC1-204ENST00000368292 BRIP1Q9BX63 1249 aa5.8□□□□□ -1.48
ECHDC1-204ENST00000368292 CATSPERZQ9NTU4 200 aa5.8□□□□□ -1.48
ECHDC1-204ENST00000368292 SPTLC3Q9NUV7 552 aa5.8□□□□□ -1.48
ECHDC1-204ENST00000368292 DTLQ9NZJ0 730 aa5.8□□□□□ -1.48
ECHDC1-204ENST00000368292 H2AFY2Q9P0M6 372 aaPredicted RBP5.8□□□□□ -1.48
ECHDC1-204ENST00000368292 WASF3Q9UPY6 502 aa5.8□□□□□ -1.48
ECHDC1-204ENST00000368292 ZKSCAN5Q9Y2L8 839 aa5.8□□□□□ -1.48
ECHDC1-204ENST00000368292 DAAM1Q9Y4D1 1078 aa5.8□□□□□ -1.48
ECHDC1-204ENST00000368292 SCN7AQ01118 1682 aa5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 MRC1P22897 1456 aa5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 FAM170AA1A519 330 aa5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 ZNF561-AS1K7EIQ3 104 aa5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 FFAR3O14843 346 aa5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 GSTA4O15217 222 aa5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 KIF5CO60282 957 aa5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 MAFKO60675 156 aa5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 GAS7O60861 476 aa5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 COQ9O75208 318 aa5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 PRKD3O94806 890 aa5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 U2AF1L5P0DN76 240 aaPredicted RBP5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 ZSCAN22P10073 491 aaPredicted RBP5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 CYP2C8P10632 490 aa5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 PDE6AP16499 860 aa5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 RPL17P18621 184 aaKnown RBP5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 OAS2P29728 719 aaKnown RBP5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 HOXC13P31276 330 aa5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 EPHA5P54756 1037 aa5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 JAM2P57087 298 aa5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 ST5P78524 1137 aa5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 U2AF1Q01081 240 aaKnown RBP eCLIP5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 MCL1Q07820 350 aa5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 ITKQ08881 620 aa5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 PDE1CQ14123 709 aaPredicted RBP5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 TRIM29Q14134 588 aa5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 SART3Q15020 963 aaKnown RBP5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 CRY1Q16526 586 aa5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 VMACQ2NL98 169 aa5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 KRTAP19-4Q3LI73 84 aa5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 DNAJC21Q5F1R6 531 aaKnown RBP5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 PRR5LQ6MZQ0 368 aa5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 CFAP161Q6P656 301 aa5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 CD300LDQ6UXZ3 194 aa5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 SPOCD1Q6ZMY3 1216 aa5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 MMS22LQ6ZRQ5 1243 aa5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 OSTM1Q86WC4 334 aa5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 RASSF3Q86WH2 238 aa5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 RASAL3Q86YV0 1011 aa5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 SIAH1Q8IUQ4 282 aa5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 CNTD1Q8N815 330 aa5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 TP53I13Q8NBR0 393 aaPredicted RBP5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 TBC1D20Q96BZ9 403 aa5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 MTMR8Q96EF0 704 aa5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 TOE1Q96GM8 510 aaKnown RBP5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 MAP3K14Q99558 947 aa5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 XPO4Q9C0E2 1151 aaKnown RBP5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 SMURF1Q9HCE7 757 aa5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 EMC7Q9NPA0 242 aa5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 ADARB2Q9NS39 739 aaKnown RBP5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 SPATA6Q9NWH7 488 aaPredicted RBP5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 C9orf78Q9NZ63 289 aaPredicted RBP5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 GPRC5DQ9NZD1 345 aa5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 HSPBP1Q9NZL4 362 aa5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 NARFQ9UHQ1 456 aa5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 DSEQ9UL01 958 aa5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 IKBKGQ9Y6K9 419 aa5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 PMF1-BGLAPU3KQ54 211 aa5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 RTL1A6NKG5 1358 aa5.79□□□□□ -1.48
ECHDC1-204ENST00000368292 KDM3BQ7LBC6 1761 aa5.78□□□□□ -1.48
ECHDC1-204ENST00000368292 A0A1W2PPC1 479 aa5.78□□□□□ -1.48
ECHDC1-204ENST00000368292 ERICH4A6NGS2 130 aa5.78□□□□□ -1.48
ECHDC1-204ENST00000368292 hCG_1984214I3L0E3 225 aa5.78□□□□□ -1.48
ECHDC1-204ENST00000368292 GABRDO14764 452 aa5.78□□□□□ -1.48
ECHDC1-204ENST00000368292 CCDC159P0C7I6 412 aa5.78□□□□□ -1.48
ECHDC1-204ENST00000368292 ZBTB48P10074 688 aaPredicted RBP5.78□□□□□ -1.48
ECHDC1-204ENST00000368292 NEFHP12036 1026 aa5.78□□□□□ -1.48
ECHDC1-204ENST00000368292 SARSP49591 514 aaKnown RBP5.78□□□□□ -1.48
ECHDC1-204ENST00000368292 MAP3K12Q12852 859 aa5.78□□□□□ -1.48
ECHDC1-204ENST00000368292 TUSC3Q13454 348 aa5.78□□□□□ -1.48
ECHDC1-204ENST00000368292 ARHGAP44Q17R89 818 aa5.78□□□□□ -1.48
ECHDC1-204ENST00000368292 ATP13A4Q4VNC1 1196 aa5.78□□□□□ -1.48
ECHDC1-204ENST00000368292 TCERG1LQ5VWI1 586 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms