RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 PEX5P50542 639 aa6.1□□□□□ -1.43
CD47-201ENST00000355354 CTBSQ01459 385 aa6.1□□□□□ -1.43
CD47-201ENST00000355354 COASYQ13057 564 aa6.1□□□□□ -1.43
CD47-201ENST00000355354 LRRC26Q2I0M4 334 aa6.1□□□□□ -1.43
CD47-201ENST00000355354 AAK1Q2M2I8 961 aa6.1□□□□□ -1.43
CD47-201ENST00000355354 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.1□□□□□ -1.43
CD47-201ENST00000355354 TEX11Q8IYF3 940 aa6.1□□□□□ -1.43
CD47-201ENST00000355354 WDTC1Q8N5D0 677 aa6.1□□□□□ -1.43
CD47-201ENST00000355354 WDR66Q8TBY9 1149 aa6.1□□□□□ -1.43
CD47-201ENST00000355354 C1orf54Q8WWF1 131 aa6.1□□□□□ -1.43
CD47-201ENST00000355354 HOOK2Q96ED9 719 aa6.1□□□□□ -1.43
CD47-201ENST00000355354 HAUS2Q9NVX0 235 aa6.1□□□□□ -1.43
CD47-201ENST00000355354 FBXL5Q9UKA1 691 aa6.1□□□□□ -1.43
CD47-201ENST00000355354 PCDHA13Q9Y5I0 950 aa6.1□□□□□ -1.43
CD47-201ENST00000355354 FREM1Q5H8C1 2179 aa6.1□□□□□ -1.43
CD47-201ENST00000355354 PPEF2O14830 753 aa6.1□□□□□ -1.43
CD47-201ENST00000355354 SHOX2O60902 331 aaPredicted RBP6.1□□□□□ -1.43
CD47-201ENST00000355354 ENTPD5O75356 428 aa6.1□□□□□ -1.43
CD47-201ENST00000355354 CD4P01730 458 aa6.1□□□□□ -1.43
CD47-201ENST00000355354 ASIC1P78348 528 aa6.1□□□□□ -1.43
CD47-201ENST00000355354 CNTN2Q02246 1040 aa6.1□□□□□ -1.43
CD47-201ENST00000355354 PAK1Q13153 545 aa6.1□□□□□ -1.43
CD47-201ENST00000355354 TNFAIP1Q13829 316 aa6.1□□□□□ -1.43
CD47-201ENST00000355354 ARHGAP44Q17R89 818 aa6.1□□□□□ -1.43
CD47-201ENST00000355354 PRR16Q569H4 304 aa6.1□□□□□ -1.43
CD47-201ENST00000355354 HSP90AB4PQ58FF6 505 aa6.1□□□□□ -1.43
CD47-201ENST00000355354 EXOC3L1Q86VI1 746 aa6.1□□□□□ -1.43
CD47-201ENST00000355354 NAT16Q8N8M0 369 aa6.1□□□□□ -1.43
CD47-201ENST00000355354 SCFD2Q8WU76 684 aa6.1□□□□□ -1.43
CD47-201ENST00000355354 B3GALT6Q96L58 329 aa6.1□□□□□ -1.43
CD47-201ENST00000355354 MECRQ9BV79 373 aa6.1□□□□□ -1.43
CD47-201ENST00000355354 CEP41Q9BYV8 373 aa6.1□□□□□ -1.43
CD47-201ENST00000355354 C1QAP02745 245 aa6.1□□□□□ -1.43
CD47-201ENST00000355354 CYP2C8P10632 490 aa6.1□□□□□ -1.43
CD47-201ENST00000355354 LONRF1Q17RB8 773 aa6.1□□□□□ -1.43
CD47-201ENST00000355354 TRAF7Q6Q0C0 670 aa6.1□□□□□ -1.43
CD47-201ENST00000355354 EEPD1Q7L9B9 569 aa6.1□□□□□ -1.43
CD47-201ENST00000355354 ERICH1Q86X53 443 aa6.1□□□□□ -1.43
CD47-201ENST00000355354 AMER2Q8N7J2 671 aa6.1□□□□□ -1.43
CD47-201ENST00000355354 KCNV2Q8TDN2 545 aa6.1□□□□□ -1.43
CD47-201ENST00000355354 WDR60Q8WVS4 1066 aa6.1□□□□□ -1.43
CD47-201ENST00000355354 ATXN2LQ8WWM7 1075 aaKnown RBP6.1□□□□□ -1.43
CD47-201ENST00000355354 HAUS1Q96CS2 278 aa6.1□□□□□ -1.43
CD47-201ENST00000355354 UNKQ9C0B0 810 aaKnown RBP6.1□□□□□ -1.43
CD47-201ENST00000355354 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.1□□□□□ -1.437e-7■□□□□ 8.3
CD47-201ENST00000355354 TRIM17Q9Y577 477 aa6.1□□□□□ -1.43
CD47-201ENST00000355354 DOPEY2Q9Y3R5 2298 aa6.1□□□□□ -1.43
CD47-201ENST00000355354 USP9XQ93008 2570 aaPredicted RBP6.1□□□□□ -1.43
CD47-201ENST00000355354 A0A1B0GTL3 188 aa6.09□□□□□ -1.43
CD47-201ENST00000355354 F5H6K3 240 aa6.09□□□□□ -1.43
CD47-201ENST00000355354 HEXIM1O94992 359 aaKnown RBP6.09□□□□□ -1.43
CD47-201ENST00000355354 STBD1O95210 358 aa6.09□□□□□ -1.43
CD47-201ENST00000355354 CBX6O95503 412 aa6.09□□□□□ -1.43
CD47-201ENST00000355354 MMEP08473 750 aa6.09□□□□□ -1.43
CD47-201ENST00000355354 TRIM21P19474 475 aaKnown RBP6.09□□□□□ -1.43
CD47-201ENST00000355354 IL1R2P27930 398 aa6.09□□□□□ -1.43
CD47-201ENST00000355354 CST5P28325 142 aaPredicted RBP6.09□□□□□ -1.43
CD47-201ENST00000355354 GRIA2P42262 883 aa6.09□□□□□ -1.43
CD47-201ENST00000355354 VAV2P52735 878 aa6.09□□□□□ -1.43
CD47-201ENST00000355354 INHBCP55103 352 aa6.09□□□□□ -1.43
CD47-201ENST00000355354 KLRC3Q07444 240 aa6.09□□□□□ -1.43
CD47-201ENST00000355354 B3GNT9Q6UX72 402 aa6.09□□□□□ -1.43
CD47-201ENST00000355354 NT5DC3Q86UY8 548 aa6.09□□□□□ -1.43
CD47-201ENST00000355354 U2AF1L4Q8WU68 220 aaKnown RBP6.09□□□□□ -1.43
CD47-201ENST00000355354 TUT1Q9H6E5 874 aaKnown RBP6.09□□□□□ -1.43
CD47-201ENST00000355354 C2CD3Q4AC94 2353 aa6.09□□□□□ -1.43
CD47-201ENST00000355354 CRADDP78560 199 aa6.09□□□□□ -1.43
CD47-201ENST00000355354 OVGP1Q12889 678 aa6.09□□□□□ -1.43
CD47-201ENST00000355354 ZNF792Q3KQV3 632 aa6.09□□□□□ -1.43
CD47-201ENST00000355354 KLHL17Q6TDP4 642 aa6.09□□□□□ -1.43
CD47-201ENST00000355354 CATSPERGQ6ZRH7 1159 aa6.09□□□□□ -1.43
CD47-201ENST00000355354 CCT8L2Q96SF2 557 aa6.09□□□□□ -1.43
CD47-201ENST00000355354 RTN2O75298 545 aa6.09□□□□□ -1.43
CD47-201ENST00000355354 ARIH2O95376 493 aa6.09□□□□□ -1.43
CD47-201ENST00000355354 RARAP10276 462 aa6.09□□□□□ -1.43
CD47-201ENST00000355354 ANKRD33Q7Z3H0 272 aa6.09□□□□□ -1.43
CD47-201ENST00000355354 PRPF39Q86UA1 669 aaKnown RBP6.09□□□□□ -1.43
CD47-201ENST00000355354 RNF169Q8NCN4 708 aa6.09□□□□□ -1.43
CD47-201ENST00000355354 NPLOC4Q8TAT6 608 aa6.09□□□□□ -1.43
CD47-201ENST00000355354 MGARPQ8TDB4 240 aa6.09□□□□□ -1.43
CD47-201ENST00000355354 SLC10A4Q96EP9 437 aa6.09□□□□□ -1.43
CD47-201ENST00000355354 CCDC97Q96F63 343 aaPredicted RBP6.09□□□□□ -1.43
CD47-201ENST00000355354 WRNIP1Q96S55 665 aa6.09□□□□□ -1.43
CD47-201ENST00000355354 KIAA1683Q9H0B3 1180 aa6.09□□□□□ -1.43
CD47-201ENST00000355354 CENPHQ9H3R5 247 aa6.09□□□□□ -1.43
CD47-201ENST00000355354 HERC5Q9UII4 1024 aaKnown RBP6.09□□□□□ -1.43
CD47-201ENST00000355354 SYNPO2Q9UMS6 1093 aa6.09□□□□□ -1.43
CD47-201ENST00000355354 GCN1Q92616 2671 aaKnown RBP6.09□□□□□ -1.43
CD47-201ENST00000355354 RALGAPA1Q6GYQ0 2036 aa6.09□□□□□ -1.43
CD47-201ENST00000355354 GJB3O75712 270 aa6.09□□□□□ -1.44
CD47-201ENST00000355354 RASSF9O75901 435 aa6.09□□□□□ -1.44
CD47-201ENST00000355354 CORO7P57737 925 aa6.09□□□□□ -1.44
CD47-201ENST00000355354 CACNB2Q08289 660 aaPredicted RBP6.09□□□□□ -1.44
CD47-201ENST00000355354 TRDNQ13061 729 aa6.09□□□□□ -1.44
CD47-201ENST00000355354 PRPF4BQ13523 1007 aaKnown RBP6.09□□□□□ -1.44
CD47-201ENST00000355354 KRT32Q14532 448 aa6.09□□□□□ -1.44
CD47-201ENST00000355354 RILPL1Q5EBL4 403 aa6.09□□□□□ -1.44
CD47-201ENST00000355354 ZNF658Q5TYW1 1059 aaPredicted RBP6.09□□□□□ -1.44
CD47-201ENST00000355354 CYP4V2Q6ZWL3 525 aaPredicted RBP6.09□□□□□ -1.44
CD47-201ENST00000355354 ANO5Q75V66 913 aa6.09□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 248.1 ms