RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 AZI2Q9H6S1 392 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 EPS15L1Q9UBC2 864 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 LRWD1Q9UFC0 647 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 PADI4Q9UM07 663 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 LZTS1Q9Y250 596 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 RFX7Q2KHR2 1363 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 LRRC7Q96NW7 1537 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 CES2O00748 559 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 GYG2O15488 501 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 RNMTO43148 476 aaKnown RBP9.08□□□□□ -0.96
TDP1-201ENST00000335725 SULT1B1O43704 296 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 ZPR1O75312 459 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 FKBP6O75344 327 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 PCSK6P29122 969 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 ECHS1P30084 290 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 STX2P32856 288 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 KRT20P35900 424 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 SMU1Q2TAY7 513 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 TTC39AQ5SRH9 613 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 DCP2Q8IU60 420 aaKnown RBP9.08□□□□□ -0.96
TDP1-201ENST00000335725 PPP4R1Q8TF05 950 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 MAGEB18Q96M61 343 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 SLC38A7Q9NVC3 462 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 MYH8P13535 1937 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 RCCD1A6NED2 376 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 CCNT1O60563 726 aaKnown RBP9.08□□□□□ -0.96
TDP1-201ENST00000335725 ZBTB11O95625 1053 aaPredicted RBP9.08□□□□□ -0.96
TDP1-201ENST00000335725 CDH2P19022 906 aaPredicted RBP9.08□□□□□ -0.96
TDP1-201ENST00000335725 JAK1P23458 1154 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 MLLT6P55198 1093 aaPredicted RBP9.08□□□□□ -0.96
TDP1-201ENST00000335725 ATP1A4Q13733 1029 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 SF3B3Q15393 1217 aaKnown RBP9.08□□□□□ -0.96
TDP1-201ENST00000335725 SH3BP5LQ7L8J4 393 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 KLHL7Q8IXQ5 586 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 ZMYND12Q9H0C1 365 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 SP140LQ9H930 580 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 USP42Q9H9J4 1324 aaKnown RBP9.08□□□□□ -0.96
TDP1-201ENST00000335725 GPRC5DQ9NZD1 345 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 EHD2Q9NZN4 543 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 IGSF9Q9P2J2 1179 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 TSPYL4Q9UJ04 414 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 STARD13Q9Y3M8 1113 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 CASZ1Q86V15 1759 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 C15orf38-AP3S2A0A0A6YYH1 394 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 ILVBLA1L0T0 632 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 TSPY2A6NKD2 308 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 H7C0C1 242 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 CCDC188H7C350 402 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 INO80B-WBP1J3KQ70 363 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 SPAG7O75391 227 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 RSL1D1O76021 490 aaKnown RBP9.07□□□□□ -0.96
TDP1-201ENST00000335725 TOMM70O94826 608 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 TSPY3P0CV98 308 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 TSPY8P0CW00 308 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 SMIM18P0DKX4 95 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 CDC25AP30304 524 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 CSTF2P33240 577 aaKnown RBP eCLIP9.07□□□□□ -0.96
TDP1-201ENST00000335725 EVI2BP34910 448 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 STAT3P40763 770 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 GPD2P43304 727 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 HAAOP46952 286 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 TSPY1Q01534 308 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 FOLH1Q04609 750 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 DCAF6Q58WW2 860 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 PPP4R4Q6NUP7 873 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 METTL2BQ6P1Q9 378 aaKnown RBP9.07□□□□□ -0.96
TDP1-201ENST00000335725 ZNF600Q6ZNG1 722 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 ARPINQ7Z6K5 226 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 RAB3IL1Q8TBN0 382 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 RAPGEF4Q8WZA2 1011 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 HPS1Q92902 700 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 FAR2Q96K12 515 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 FAM20AQ96MK3 541 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 PSD2Q9BQI7 771 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 C17orf80Q9BSJ5 609 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 TLR10Q9BXR5 811 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 GRIP2Q9C0E4 1043 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 PABPC3Q9H361 631 aaKnown RBP9.07□□□□□ -0.96
TDP1-201ENST00000335725 SNRKQ9NRH2 765 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 C9orf78Q9NZ63 289 aaPredicted RBP9.07□□□□□ -0.96
TDP1-201ENST00000335725 NCKIPSDQ9NZQ3 722 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 VPS51Q9UID3 782 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 TFR2Q9UP52 801 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 B3GNT3Q9Y2A9 372 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 RWDD3Q9Y3V2 267 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 TACC3Q9Y6A5 838 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 PNPLA7Q6ZV29 1317 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 FAM172BPA6NC97 362 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 H7C1D1 291 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 GNPATO15228 680 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 PHF2O75151 1096 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 PAHP00439 452 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 TBXAS1P24557 533 aaPredicted RBP9.07□□□□□ -0.96
TDP1-201ENST00000335725 STX1BP61266 288 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 GFPT1Q06210 699 aaPredicted RBP9.07□□□□□ -0.96
TDP1-201ENST00000335725 KCNMA1Q12791 1236 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 THOC5Q13769 683 aaKnown RBP9.07□□□□□ -0.96
TDP1-201ENST00000335725 ACAP1Q15027 740 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 TXNRD1Q16881 649 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 CYP4A22Q5TCH4 519 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms