RNA–Protein interactions for RNA: ENST00000264741.9

ITGA9-201, Transcript of integrin subunit alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA9, Length 7,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA9-201ENST00000264741 SNX6Q9UNH7 406 aa17.24■□□□□ 0.35
ITGA9-201ENST00000264741 TSC22D4Q9Y3Q8 395 aa17.24■□□□□ 0.35
ITGA9-201ENST00000264741 CTIFO43310 598 aaKnown RBP17.24■□□□□ 0.35
ITGA9-201ENST00000264741 HIRAP54198 1017 aaPredicted RBP17.24■□□□□ 0.35
ITGA9-201ENST00000264741 E2F4Q16254 413 aa17.24■□□□□ 0.35
ITGA9-201ENST00000264741 NUP85Q9BW27 656 aa17.24■□□□□ 0.35
ITGA9-201ENST00000264741 BHMT2Q9H2M3 363 aa17.24■□□□□ 0.35
ITGA9-201ENST00000264741 AKAP7Q9P0M2 348 aaPredicted RBP17.24■□□□□ 0.35
ITGA9-201ENST00000264741 C16orf96A6NNT2 1141 aa17.24■□□□□ 0.35
ITGA9-201ENST00000264741 DLGAP3O95886 979 aa17.24■□□□□ 0.35
ITGA9-201ENST00000264741 FGFR1P11362 822 aa17.24■□□□□ 0.35
ITGA9-201ENST00000264741 NOS3P29474 1203 aa17.24■□□□□ 0.35
ITGA9-201ENST00000264741 EIF4A3P38919 411 aaKnown RBP17.24■□□□□ 0.35
ITGA9-201ENST00000264741 HIST2H2ACQ16777 129 aaPredicted RBP17.24■□□□□ 0.35
ITGA9-201ENST00000264741 HIST2H2AA3Q6FI13 130 aa17.24■□□□□ 0.35
ITGA9-201ENST00000264741 S100A13Q99584 98 aa17.24■□□□□ 0.35
ITGA9-201ENST00000264741 SLC9A2Q9UBY0 812 aa17.24■□□□□ 0.35
ITGA9-201ENST00000264741 CYP2D7A0A087X1C5 515 aa17.23■□□□□ 0.35
ITGA9-201ENST00000264741 PLOD1Q02809 727 aaPredicted RBP17.23■□□□□ 0.35
ITGA9-201ENST00000264741 KRT31Q15323 416 aa17.23■□□□□ 0.35
ITGA9-201ENST00000264741 SEC31BQ9NQW1 1179 aa17.23■□□□□ 0.35
ITGA9-201ENST00000264741 CNTN1Q12860 1018 aa17.23■□□□□ 0.35
ITGA9-201ENST00000264741 CDH18Q13634 790 aa17.23■□□□□ 0.35
ITGA9-201ENST00000264741 MMGT1Q8N4V1 131 aa17.23■□□□□ 0.35
ITGA9-201ENST00000264741 GFM2Q969S9 779 aaKnown RBP17.23■□□□□ 0.35
ITGA9-201ENST00000264741 NMRK2Q9NPI5 230 aa17.23■□□□□ 0.35
ITGA9-201ENST00000264741 PCDHA6Q9UN73 950 aa17.23■□□□□ 0.35
ITGA9-201ENST00000264741 PCDHA8Q9Y5H6 950 aa17.23■□□□□ 0.35
ITGA9-201ENST00000264741 FGGP02679 453 aa17.23■□□□□ 0.35
ITGA9-201ENST00000264741 CALB1P05937 261 aa17.23■□□□□ 0.35
ITGA9-201ENST00000264741 SESN2P58004 480 aaPredicted RBP17.23■□□□□ 0.35
ITGA9-201ENST00000264741 TMEM35BQ8NCS4 154 aa17.23■□□□□ 0.35
ITGA9-201ENST00000264741 ABCC12Q96J65 1359 aa17.23■□□□□ 0.35
ITGA9-201ENST00000264741 CDH6P55285 790 aa17.23■□□□□ 0.35
ITGA9-201ENST00000264741 TEX14Q8IWB6 1497 aa17.23■□□□□ 0.35
ITGA9-201ENST00000264741 FAM196BA6NMK8 535 aa17.23■□□□□ 0.35
ITGA9-201ENST00000264741 SNX17Q15036 470 aa17.23■□□□□ 0.35
ITGA9-201ENST00000264741 OTOAQ7RTW8 1153 aa17.23■□□□□ 0.35
ITGA9-201ENST00000264741 SRLQ86TD4 932 aa17.23■□□□□ 0.35
ITGA9-201ENST00000264741 RBM41Q96IZ5 413 aaKnown RBP17.23■□□□□ 0.35
ITGA9-201ENST00000264741 PDCD10Q9BUL8 212 aa17.23■□□□□ 0.35
ITGA9-201ENST00000264741 APOA5Q6Q788 366 aa17.23■□□□□ 0.35
ITGA9-201ENST00000264741 AK8Q96MA6 479 aa17.23■□□□□ 0.35
ITGA9-201ENST00000264741 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.23■□□□□ 0.35
ITGA9-201ENST00000264741 IPPQ9Y573 584 aa17.23■□□□□ 0.35
ITGA9-201ENST00000264741 PNMA6FA0A0J9YX94 578 aa17.23■□□□□ 0.35
ITGA9-201ENST00000264741 VCLP18206 1134 aa17.23■□□□□ 0.35
ITGA9-201ENST00000264741 GABPB1Q06547 395 aaPredicted RBP17.23■□□□□ 0.35
ITGA9-201ENST00000264741 SPP2Q13103 211 aa17.23■□□□□ 0.35
ITGA9-201ENST00000264741 CAMK2GQ13555 558 aaPredicted RBP17.23■□□□□ 0.35
ITGA9-201ENST00000264741 TMEM132BQ14DG7 1078 aa17.23■□□□□ 0.35
ITGA9-201ENST00000264741 ZNF658Q5TYW1 1059 aaPredicted RBP17.23■□□□□ 0.35
ITGA9-201ENST00000264741 NEK9Q8TD19 979 aa17.23■□□□□ 0.35
ITGA9-201ENST00000264741 BRIP1Q9BX63 1249 aa17.23■□□□□ 0.35
ITGA9-201ENST00000264741 AAASQ9NRG9 546 aa17.23■□□□□ 0.35
ITGA9-201ENST00000264741 SIK3Q9Y2K2 1263 aa17.23■□□□□ 0.35
ITGA9-201ENST00000264741 USP17L5A8MUK1 530 aa17.22■□□□□ 0.35
ITGA9-201ENST00000264741 HLA-DQA2P01906 255 aa17.22■□□□□ 0.35
ITGA9-201ENST00000264741 KRT76Q01546 638 aa17.22■□□□□ 0.35
ITGA9-201ENST00000264741 C10orf120Q5SQS8 335 aa17.22■□□□□ 0.35
ITGA9-201ENST00000264741 PALB2Q86YC2 1186 aa17.22■□□□□ 0.35
ITGA9-201ENST00000264741 ZNF24P17028 368 aa17.22■□□□□ 0.35
ITGA9-201ENST00000264741 SYNE4Q8N205 404 aa17.22■□□□□ 0.35
ITGA9-201ENST00000264741 RGS7P49802 495 aa17.22■□□□□ 0.35
ITGA9-201ENST00000264741 PEX5P50542 639 aa17.22■□□□□ 0.35
ITGA9-201ENST00000264741 PGS1Q32NB8 556 aa17.22■□□□□ 0.35
ITGA9-201ENST00000264741 R3HCC1LQ7Z5L2 792 aaKnown RBP17.22■□□□□ 0.35
ITGA9-201ENST00000264741 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.22■□□□□ 0.35
ITGA9-201ENST00000264741 DHTKD1Q96HY7 919 aaPredicted RBP17.22■□□□□ 0.35
ITGA9-201ENST00000264741 ARHGEF38Q9NXL2 777 aa17.22■□□□□ 0.35
ITGA9-201ENST00000264741 NFU1Q9UMS0 254 aa17.22■□□□□ 0.35
ITGA9-201ENST00000264741 KAT6AQ92794 2004 aa17.22■□□□□ 0.35
ITGA9-201ENST00000264741 BBOX1O75936 387 aa17.22■□□□□ 0.35
ITGA9-201ENST00000264741 GCFC2P16383 781 aaKnown RBP17.22■□□□□ 0.35
ITGA9-201ENST00000264741 CHRM3P20309 590 aa17.22■□□□□ 0.35
ITGA9-201ENST00000264741 NR1D1P20393 614 aa17.22■□□□□ 0.35
ITGA9-201ENST00000264741 ARL3P36405 182 aa17.22■□□□□ 0.35
ITGA9-201ENST00000264741 CRKP46108 304 aa17.22■□□□□ 0.35
ITGA9-201ENST00000264741 C2orf40Q9H1Z8 148 aa17.22■□□□□ 0.35
ITGA9-201ENST00000264741 IQGAP2Q13576 1575 aa17.22■□□□□ 0.35
ITGA9-201ENST00000264741 SGSM2O43147 1006 aa17.22■□□□□ 0.35
ITGA9-201ENST00000264741 ARSJQ5FYB0 599 aaPredicted RBP17.22■□□□□ 0.35
ITGA9-201ENST00000264741 NACC2Q96BF6 587 aa17.22■□□□□ 0.35
ITGA9-201ENST00000264741 SCN3BQ9NY72 215 aa17.22■□□□□ 0.35
ITGA9-201ENST00000264741 A0A0D9SFI3 127 aa17.22■□□□□ 0.35
ITGA9-201ENST00000264741 KCNB1Q14721 858 aa17.22■□□□□ 0.35
ITGA9-201ENST00000264741 OR8H2Q8N162 312 aa17.22■□□□□ 0.35
ITGA9-201ENST00000264741 PMM1Q92871 262 aa17.22■□□□□ 0.35
ITGA9-201ENST00000264741 C19orf60Q96EN9 201 aa17.22■□□□□ 0.35
ITGA9-201ENST00000264741 FEM1BQ9UK73 627 aa17.22■□□□□ 0.35
ITGA9-201ENST00000264741 ENDOD1O94919 500 aa17.21■□□□□ 0.35
ITGA9-201ENST00000264741 KDSRQ06136 332 aa17.21■□□□□ 0.35
ITGA9-201ENST00000264741 BRINP3Q76B58 766 aa17.21■□□□□ 0.35
ITGA9-201ENST00000264741 C11orf70Q9BRQ4 267 aa17.21■□□□□ 0.35
ITGA9-201ENST00000264741 MAGEF1Q9HAY2 307 aa17.21■□□□□ 0.35
ITGA9-201ENST00000264741 SRP68Q9UHB9 627 aaKnown RBP17.21■□□□□ 0.35
ITGA9-201ENST00000264741 CHGBP05060 677 aa17.21■□□□□ 0.35
ITGA9-201ENST00000264741 ATN1P54259 1190 aaPredicted RBP17.21■□□□□ 0.35
ITGA9-201ENST00000264741 ANKMY2Q8IV38 441 aa17.21■□□□□ 0.35
ITGA9-201ENST00000264741 CALML6Q8TD86 181 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms