RNA–Protein interactions for RNA: ENSMUST00000113388.2

Chm-202, Transcript of Rab proteins geranylgeranyltransferase component A 1, mousemouse

TSL 1 (best) BASIC

Gene Chm, Length 4,749 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chm-202ENSMUST00000113388 Gabbr2Q80T41 940 aa7.57□□□□□ -1.2
Chm-202ENSMUST00000113388 Q8C4P0 716 aa7.57□□□□□ -1.2
Chm-202ENSMUST00000113388 Pkn3Q8K045 878 aa7.57□□□□□ -1.2
Chm-202ENSMUST00000113388 Nod2Q8K3Z0 1020 aa7.57□□□□□ -1.2
Chm-202ENSMUST00000113388 Ogfrl1Q8VE52 464 aa7.57□□□□□ -1.2
Chm-202ENSMUST00000113388 Serpinb3bQ9D1Q5 387 aa7.57□□□□□ -1.2
Chm-202ENSMUST00000113388 Mfap3lQ9D3X9 409 aa7.57□□□□□ -1.2
Chm-202ENSMUST00000113388 Rsph9Q9D9V4 276 aa7.57□□□□□ -1.2
Chm-202ENSMUST00000113388 PycardQ9EPB4 193 aa7.57□□□□□ -1.2
Chm-202ENSMUST00000113388 Nek6Q9ES70 313 aa7.57□□□□□ -1.2
Chm-202ENSMUST00000113388 Cul1Q9WTX6 776 aa7.57□□□□□ -1.2
Chm-202ENSMUST00000113388 Cog1Q9Z160 980 aa7.57□□□□□ -1.2
Chm-202ENSMUST00000113388 Diaph3Q9Z207 1171 aa7.57□□□□□ -1.2
Chm-202ENSMUST00000113388 Cyp4a30bA0A087WS15 508 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Abl1P00520 1123 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 PklrP53657 574 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 PctpP53808 214 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Krt76Q3UV17 594 aaKnown RBP7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Adrbk2Q3UYH7 688 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Tnfaip2Q61333 691 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Pde1aQ61481 565 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Nlgn2Q69ZK9 836 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Prr18Q6PAN7 307 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Btbd7Q8CFE5 1130 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Myl6bQ8CI43 207 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Rmnd1Q8CI78 450 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Q8CIL4 281 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Swi5Q8K3D3 89 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Pspc1Q8R326 523 aaKnown RBP7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Ascc2Q91WR3 749 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Rpap3Q9D706 660 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Actrt1Q9D9J3 376 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 ParvaQ9EPC1 372 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Tsc22d4Q9EQN3 387 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Calm4Q9JM83 148 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Rbm8a2A0A0N4SUH6 174 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 4932429P05RikA2ADI4 785 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Oip5A2AQ14 241 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Clrn2B2RVW2 232 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Gm6502L7N456 481 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 TbcaP48428 108 aaKnown RBP7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 NyxP83503 476 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 NpeppsQ11011 920 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Otud5Q3U2S4 566 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Cep295nlQ497N6 533 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 CpQ61147 1061 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Ifit1Q64282 463 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Klhl14Q69ZK5 630 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Exoc3Q6KAR6 755 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Gm21985Q6P6P5 1106 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Serpinb3dQ6UKZ0 387 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Stk32aQ8BGW6 398 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Prune1Q8BIW1 454 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Arhgap25Q8BYW1 648 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 EpgnQ924X1 152 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Tspan1Q99J59 240 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Trim33Q99PP7 1142 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Rbm8aQ9CWZ3 174 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Mrps25Q9D125 171 aaKnown RBP7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Tekt1Q9DAJ2 418 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 BcamQ9R069 622 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Mapk11Q9WUI1 364 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Asb4Q9WV71 426 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Ttll11A4Q9F4 727 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Gpr161B2RPY5 545 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Lonrf2B2RT44 518 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Gimap9G3X987 291 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Cdh16O88338 830 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Ass1P16460 412 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 CidecP56198 239 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Pfkfb1P70266 471 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Hdac2P70288 488 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 AcadsQ07417 412 aaKnown RBP7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Trappc10Q3TLI0 1259 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Etaa1Q5SVT3 877 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 StilQ60988 1262 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Ccdc154Q6RUT8 657 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Tmem266Q8BZB3 538 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Lrrc41Q8K1C9 807 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Ndfip2Q91ZP6 311 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 HnrnpllQ921F4 591 aaKnown RBP7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Prpf40aQ9R1C7 953 aaKnown RBP7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Extl3Q9WVL6 918 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Tll2Q9WVM6 1012 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Mroh6V9GX81 722 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Megf6Q80V70 1572 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Tmem45a2B7ZWJ5 289 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Vti1aO89116 217 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Stat5bP42232 786 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Dynll1P63168 89 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Krt86P97861 486 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Tmem184cQ3TPR7 525 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Actn1Q7TPR4 892 aaKnown RBP7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Ube3cQ80U95 1083 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 SnupnQ80W37 358 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Znf598Q80YR4 908 aaKnown RBP7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Lyve1Q8BHC0 318 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Gucy1b2Q8BXH3 824 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Angel2Q8K1C0 544 aa7.56□□□□□ -1.2
Chm-202ENSMUST00000113388 Lman1lQ8VCD3 505 aa7.56□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 48.1 ms