Protein–RNA interactions for Protein: Q61481

Pde1a, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde1aQ61481 Gm25239-201ENSMUST00000174915 86 ntBASIC38.67■■■■□ 3.78
Pde1aQ61481 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.74■■■■□ 3.31
Pde1aQ61481 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
Pde1aQ61481 Gm15042-201ENSMUST00000120212 883 ntBASIC33.87■■■■□ 3.01
Pde1aQ61481 Gm24109-201ENSMUST00000175489 103 ntBASIC33.45■■■□□ 2.95
Pde1aQ61481 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
Pde1aQ61481 Gm15045-201ENSMUST00000117359 883 ntBASIC33.06■■■□□ 2.88
Pde1aQ61481 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
Pde1aQ61481 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Pde1aQ61481 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.64■■■□□ 2.82
Pde1aQ61481 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
Pde1aQ61481 Gm23366-201ENSMUST00000175022 89 ntBASIC32.37■■■□□ 2.77
Pde1aQ61481 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.3■■■□□ 2.76
Pde1aQ61481 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Pde1aQ61481 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Pde1aQ61481 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Pde1aQ61481 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Pde1aQ61481 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.38■■■□□ 2.61
Pde1aQ61481 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
Pde1aQ61481 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.29■■■□□ 2.6
Pde1aQ61481 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.2■■■□□ 2.59
Pde1aQ61481 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Pde1aQ61481 Psd-208ENSMUST00000224556 2034 ntBASIC31.11■■■□□ 2.57
Pde1aQ61481 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Pde1aQ61481 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.98■■■□□ 2.55
Pde1aQ61481 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Pde1aQ61481 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.91■■■□□ 2.54
Pde1aQ61481 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Pde1aQ61481 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.9■■■□□ 2.54
Pde1aQ61481 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
Pde1aQ61481 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.78■■■□□ 2.52
Pde1aQ61481 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Pde1aQ61481 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.68■■■□□ 2.5
Pde1aQ61481 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Pde1aQ61481 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Pde1aQ61481 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.56■■■□□ 2.48
Pde1aQ61481 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.47
Pde1aQ61481 Gm25238-201ENSMUST00000174914 89 ntBASIC30.48■■■□□ 2.47
Pde1aQ61481 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Pde1aQ61481 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.19■■■□□ 2.42
Pde1aQ61481 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Pde1aQ61481 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Pde1aQ61481 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.95■■■□□ 2.39
Pde1aQ61481 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.9■■■□□ 2.38
Pde1aQ61481 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Pde1aQ61481 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.83■■■□□ 2.37
Pde1aQ61481 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Pde1aQ61481 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
Pde1aQ61481 Gm27325-201ENSMUST00000175467 74 ntBASIC29.66■■■□□ 2.34
Pde1aQ61481 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.65■■■□□ 2.34
Pde1aQ61481 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Pde1aQ61481 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.61■■■□□ 2.33
Pde1aQ61481 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.53■■■□□ 2.32
Pde1aQ61481 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.5■■■□□ 2.31
Pde1aQ61481 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
Pde1aQ61481 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Pde1aQ61481 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.35■■■□□ 2.29
Pde1aQ61481 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.32■■■□□ 2.28
Pde1aQ61481 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Pde1aQ61481 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Pde1aQ61481 Gm25262-201ENSMUST00000174934 133 ntBASIC29.27■■■□□ 2.28
Pde1aQ61481 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Pde1aQ61481 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.13■■■□□ 2.25
Pde1aQ61481 Rab21-202ENSMUST00000218831 843 ntBASIC29.13■■■□□ 2.25
Pde1aQ61481 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Pde1aQ61481 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
Pde1aQ61481 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.05■■■□□ 2.24
Pde1aQ61481 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Pde1aQ61481 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.02■■■□□ 2.24
Pde1aQ61481 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Pde1aQ61481 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.94■■■□□ 2.22
Pde1aQ61481 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
Pde1aQ61481 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28.9■■■□□ 2.22
Pde1aQ61481 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.89■■■□□ 2.22
Pde1aQ61481 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Pde1aQ61481 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.83■■■□□ 2.21
Pde1aQ61481 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.83■■■□□ 2.21
Pde1aQ61481 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Pde1aQ61481 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Pde1aQ61481 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.76■■■□□ 2.19
Pde1aQ61481 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28.74■■■□□ 2.19
Pde1aQ61481 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Pde1aQ61481 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.71■■■□□ 2.19
Pde1aQ61481 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.69■■■□□ 2.18
Pde1aQ61481 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
Pde1aQ61481 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Pde1aQ61481 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Pde1aQ61481 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Pde1aQ61481 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Pde1aQ61481 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.62■■■□□ 2.17
Pde1aQ61481 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.57■■■□□ 2.16
Pde1aQ61481 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.56■■■□□ 2.16
Pde1aQ61481 Gm26115-201ENSMUST00000175605 87 ntBASIC28.52■■■□□ 2.16
Pde1aQ61481 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Pde1aQ61481 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Pde1aQ61481 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Pde1aQ61481 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.44■■■□□ 2.14
Pde1aQ61481 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
Pde1aQ61481 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.43■■■□□ 2.14
Pde1aQ61481 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.42■■■□□ 2.14
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms