RNA–Protein interactions for RNA: YPR110C

RPC40, Transcript of RNA polymerase subunit AC40, yeastyeast

Gene RPC40, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPC40YPR110C PAM18Q07914 168 aa2.2□□□□□ -2.06
RPC40YPR110C YPL150WQ12152 901 aa2.2□□□□□ -2.06
RPC40YPR110C SMT3Q12306 101 aaKnown RBP2.2□□□□□ -2.06
RPC40YPR110C TIM22Q12328 207 aa2.2□□□□□ -2.06
RPC40YPR110C MRX4Q12467 430 aa2.2□□□□□ -2.06
RPC40YPR110C YPL119C-AQ3E751 87 aa2.2□□□□□ -2.06
RPC40YPR110C SWI1P09547 1314 aa2.19□□□□□ -2.06
RPC40YPR110C YEL009C-AA0A023PZF2 135 aa2.19□□□□□ -2.06
RPC40YPR110C TOM40P23644 387 aaKnown RBP2.19□□□□□ -2.06
RPC40YPR110C BMH1P29311 267 aaKnown RBP2.19□□□□□ -2.06
RPC40YPR110C LIA1P47120 325 aaKnown RBP2.19□□□□□ -2.06
RPC40YPR110C MRPL50P53724 139 aa2.19□□□□□ -2.06
RPC40YPR110C ALG9P53868 555 aaKnown RBP2.19□□□□□ -2.06
RPC40YPR110C TLG1Q03322 224 aa2.19□□□□□ -2.06
RPC40YPR110C YDR209CQ03480 137 aa2.19□□□□□ -2.06
RPC40YPR110C RNH1Q04740 348 aa2.19□□□□□ -2.06
RPC40YPR110C COQ10Q08058 207 aa2.19□□□□□ -2.06
RPC40YPR110C YPS3Q12303 508 aa2.19□□□□□ -2.06
RPC40YPR110C NOT5Q12514 560 aaPredicted RBP2.19□□□□□ -2.06
RPC40YPR110C TDH2P00358 332 aaKnown RBP2.18□□□□□ -2.06
RPC40YPR110C RPO26P20435 155 aa2.18□□□□□ -2.06
RPC40YPR110C PPH21P23594 369 aa2.18□□□□□ -2.06
RPC40YPR110C RSA4P25382 515 aaKnown RBP2.18□□□□□ -2.06
RPC40YPR110C CAB3P36076 571 aa2.18□□□□□ -2.06
RPC40YPR110C YBR096WP38256 230 aa2.18□□□□□ -2.06
RPC40YPR110C TEM1P38987 245 aa2.18□□□□□ -2.06
RPC40YPR110C HOC1P47124 396 aa2.18□□□□□ -2.06
RPC40YPR110C PET117Q02771 107 aa2.18□□□□□ -2.06
RPC40YPR110C YMR166CQ03829 368 aa2.18□□□□□ -2.06
RPC40YPR110C PEX10Q05568 337 aa2.18□□□□□ -2.06
RPC40YPR110C PLB3Q08108 686 aa2.18□□□□□ -2.06
RPC40YPR110C TY3A-GQ12173 290 aa2.18□□□□□ -2.06
RPC40YPR110C YCT1Q12235 531 aa2.18□□□□□ -2.06
RPC40YPR110C TY3A-IQ99219 290 aa2.18□□□□□ -2.06
RPC40YPR110C HKR1P41809 1802 aa2.18□□□□□ -2.06
RPC40YPR110C FIG2P25653 1609 aa2.17□□□□□ -2.06
RPC40YPR110C RPS5P26783 225 aaKnown RBP2.17□□□□□ -2.06
RPC40YPR110C YKL075CP36083 450 aa2.17□□□□□ -2.06
RPC40YPR110C YJL144WP47009 104 aa2.17□□□□□ -2.06
RPC40YPR110C NIF3P53081 288 aa2.17□□□□□ -2.06
RPC40YPR110C USE1P53146 245 aa2.17□□□□□ -2.06
RPC40YPR110C YGL088WP53151 121 aa2.17□□□□□ -2.06
RPC40YPR110C ASI3P53983 676 aa2.17□□□□□ -2.06
RPC40YPR110C YDR114CQ04597 100 aa2.17□□□□□ -2.06
RPC40YPR110C YPL247CQ12523 523 aa2.17□□□□□ -2.06
RPC40YPR110C SAC3P46674 1301 aa2.17□□□□□ -2.06
RPC40YPR110C FAS2P19097 1887 aaKnown RBP2.16□□□□□ -2.06
RPC40YPR110C MET2P08465 486 aa2.16□□□□□ -2.06
RPC40YPR110C YCR016WP25617 290 aaKnown RBP2.16□□□□□ -2.06
RPC40YPR110C SFC1P33303 322 aa2.16□□□□□ -2.06
RPC40YPR110C GDH2P33327 1092 aaKnown RBP2.16□□□□□ -2.06
RPC40YPR110C DRE2P36152 348 aa2.16□□□□□ -2.06
RPC40YPR110C SDH4P37298 181 aa2.16□□□□□ -2.06
RPC40YPR110C ECM13P38195 257 aa2.16□□□□□ -2.06
RPC40YPR110C FZO1P38297 855 aa2.16□□□□□ -2.06
RPC40YPR110C GOS1P38736 223 aa2.16□□□□□ -2.06
RPC40YPR110C YER085CP40058 173 aa2.16□□□□□ -2.06
RPC40YPR110C YJL028WP47062 111 aa2.16□□□□□ -2.06
RPC40YPR110C YJR079WP47126 109 aa2.16□□□□□ -2.06
RPC40YPR110C MRH4P53166 561 aa2.16□□□□□ -2.06
RPC40YPR110C CTF19Q02732 369 aa2.16□□□□□ -2.06
RPC40YPR110C YPR098CQ06089 161 aa2.16□□□□□ -2.06
RPC40YPR110C YOL019WQ08157 551 aa2.16□□□□□ -2.06
RPC40YPR110C FEX1Q08913 375 aa2.16□□□□□ -2.06
RPC40YPR110C FEX2Q08991 375 aa2.16□□□□□ -2.06
RPC40YPR110C AGC1Q12482 902 aa2.16□□□□□ -2.06
RPC40YPR110C YKR104WP0CE69 306 aa2.15□□□□□ -2.07
RPC40YPR110C DPB2P24482 689 aaPredicted RBP2.15□□□□□ -2.07
RPC40YPR110C BFR1P38934 470 aaKnown RBP RIP-Chip data2.15□□□□□ -2.07 RIP-Chip
RPC40YPR110C SNZ3P43545 298 aa2.15□□□□□ -2.07
RPC40YPR110C JHD2P47156 728 aaPredicted RBP2.15□□□□□ -2.07
RPC40YPR110C EMI1Q04406 187 aa2.15□□□□□ -2.07
RPC40YPR110C SPG4Q04438 115 aa2.15□□□□□ -2.07
RPC40YPR110C NKP2Q06162 153 aa2.15□□□□□ -2.07
RPC40YPR110C YPR147CQ06522 304 aaKnown RBP2.15□□□□□ -2.07
RPC40YPR110C SYC1Q08553 188 aaPredicted RBP2.15□□□□□ -2.07
RPC40YPR110C SNU23Q12368 194 aaPredicted RBP2.15□□□□□ -2.07
RPC40YPR110C EMP46Q12396 444 aa2.15□□□□□ -2.07
RPC40YPR110C NCB2Q92317 146 aa2.15□□□□□ -2.07
RPC40YPR110C RAD50P12753 1312 aa2.15□□□□□ -2.07
RPC40YPR110C PDR18P53756 1333 aa2.15□□□□□ -2.07
RPC40YPR110C KRE1P17260 313 aa2.14□□□□□ -2.07
RPC40YPR110C MIG1P27705 504 aa2.14□□□□□ -2.07
RPC40YPR110C SRB4P32569 687 aa2.14□□□□□ -2.07
RPC40YPR110C LDB7P38210 180 aa2.14□□□□□ -2.07
RPC40YPR110C YHB1P39676 399 aaKnown RBP2.14□□□□□ -2.07
RPC40YPR110C YER084WP40057 128 aa2.14□□□□□ -2.07
RPC40YPR110C GCN20P43535 752 aaKnown RBP2.14□□□□□ -2.07
RPC40YPR110C EAF6P47128 113 aa2.14□□□□□ -2.07
RPC40YPR110C YGL034CP53186 121 aa2.14□□□□□ -2.07
RPC40YPR110C APJ1P53940 528 aa2.14□□□□□ -2.07
RPC40YPR110C YDR124WQ04608 324 aa2.14□□□□□ -2.07
RPC40YPR110C RRS1Q08746 203 aaKnown RBP2.14□□□□□ -2.07
RPC40YPR110C RUD3Q12234 484 aaKnown RBP2.14□□□□□ -2.07
RPC40YPR110C YBL008W-AQ3E821 79 aa2.14□□□□□ -2.07
RPC40YPR110C GSC2P40989 1895 aa2.14□□□□□ -2.07
RPC40YPR110C TCP1P12612 559 aaKnown RBP2.13□□□□□ -2.07
RPC40YPR110C MRPL25P23369 157 aa2.13□□□□□ -2.07
RPC40YPR110C RNP1P32385 249 aa2.13□□□□□ -2.07
RPC40YPR110C MSN4P33749 630 aa2.13□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 47.6 ms