RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C RPS0BP46654 252 aaKnown RBP7.18□□□□□ -1.26
SRP54YPR088C UFD1P53044 361 aa7.18□□□□□ -1.26
SRP54YPR088C API2Q04413 109 aa7.18□□□□□ -1.26
SRP54YPR088C TRM13Q12383 476 aa7.18□□□□□ -1.26
SRP54YPR088C PET20Q99373 253 aa7.18□□□□□ -1.26
SRP54YPR088C MRP17P28778 131 aa7.17□□□□□ -1.26
SRP54YPR088C GLC7P32598 312 aaKnown RBP7.17□□□□□ -1.26
SRP54YPR088C YHL037CP38733 133 aa7.17□□□□□ -1.26
SRP54YPR088C PIG2P40187 538 aa7.17□□□□□ -1.26
SRP54YPR088C YIL029CP40538 142 aa7.17□□□□□ -1.26
SRP54YPR088C MID1P41821 548 aa7.17□□□□□ -1.26
SRP54YPR088C SSN8P47821 323 aa7.17□□□□□ -1.26
SRP54YPR088C YPL077CQ02831 240 aa7.17□□□□□ -1.26
SRP54YPR088C DLT1Q04216 342 aa7.17□□□□□ -1.26
SRP54YPR088C YPR098CQ06089 161 aa7.17□□□□□ -1.26
SRP54YPR088C NCE102Q12207 173 aaRIP-Chip data7.17□□□□□ -1.26not detected
SRP54YPR088C ARG80P07249 177 aa7.16□□□□□ -1.26
SRP54YPR088C STF2P16965 84 aa7.16□□□□□ -1.26
SRP54YPR088C RPI1P23250 407 aaKnown RBP7.16□□□□□ -1.26
SRP54YPR088C PEX4P29340 183 aa7.16□□□□□ -1.26
SRP54YPR088C PAN3P36102 679 aaPredicted RBP7.16□□□□□ -1.26
SRP54YPR088C RRF1P38771 230 aa7.16□□□□□ -1.26
SRP54YPR088C GWT1P47026 490 aa7.16□□□□□ -1.26
SRP54YPR088C SMX3P54999 86 aaPredicted RBP7.16□□□□□ -1.26
SRP54YPR088C YML018CQ03730 393 aa7.16□□□□□ -1.26
SRP54YPR088C RPL25P04456 142 aaKnown RBP7.16□□□□□ -1.26
SRP54YPR088C YCR101CP25607 182 aa7.16□□□□□ -1.26
SRP54YPR088C YCR016WP25617 290 aaKnown RBP7.16□□□□□ -1.26
SRP54YPR088C ERG3P32353 365 aa7.16□□□□□ -1.26
SRP54YPR088C YER079WP40052 210 aaKnown RBP7.16□□□□□ -1.26
SRP54YPR088C YFL051CP43552 160 aa7.16□□□□□ -1.26
SRP54YPR088C SYM1Q06563 197 aa7.16□□□□□ -1.26
SRP54YPR088C YOR186WQ08560 144 aa7.16□□□□□ -1.26
SRP54YPR088C RNH203Q12338 110 aa7.16□□□□□ -1.26
SRP54YPR088C AGA2P32781 87 aa7.15□□□□□ -1.27
SRP54YPR088C FAT1P38225 669 aa7.15□□□□□ -1.27
SRP54YPR088C VMA22P38784 181 aa7.15□□□□□ -1.27
SRP54YPR088C EGT2P42835 1041 aa7.15□□□□□ -1.27
SRP54YPR088C UBC13P52490 153 aa7.15□□□□□ -1.27
SRP54YPR088C MRPL50P53724 139 aa7.15□□□□□ -1.27
SRP54YPR088C ALG9P53868 555 aaKnown RBP7.15□□□□□ -1.27
SRP54YPR088C LAP3Q01532 483 aaKnown RBP RIP-Chip data7.15□□□□□ -1.27not detected
SRP54YPR088C YDC1Q02896 317 aa7.15□□□□□ -1.27
SRP54YPR088C YDR248CQ03786 193 aa7.15□□□□□ -1.27
SRP54YPR088C PIN3Q06449 215 aa7.15□□□□□ -1.27
SRP54YPR088C MRL1Q06815 381 aa7.15□□□□□ -1.27
SRP54YPR088C PUT1P09368 476 aa7.14□□□□□ -1.27
SRP54YPR088C NAT2P37293 288 aa7.14□□□□□ -1.27
SRP54YPR088C YJR011CP47086 261 aaPredicted RBP7.14□□□□□ -1.27
SRP54YPR088C EAF3Q12432 401 aa7.14□□□□□ -1.27
SRP54YPR088C PRM4Q12498 284 aa7.14□□□□□ -1.27
SRP54YPR088C REP2P03872 296 aa7.13□□□□□ -1.27
SRP54YPR088C TRR1P29509 319 aaKnown RBP7.13□□□□□ -1.27
SRP54YPR088C YBR197CP38306 217 aa7.13□□□□□ -1.27
SRP54YPR088C OKP1P53298 406 aa7.13□□□□□ -1.27
SRP54YPR088C ACB1P31787 87 aa7.12□□□□□ -1.27
SRP54YPR088C POP8P38208 133 aa7.12□□□□□ -1.27
SRP54YPR088C FIG1P38224 298 aa7.12□□□□□ -1.27
SRP54YPR088C YBR220CP38318 560 aa7.12□□□□□ -1.27
SRP54YPR088C CCS1P40202 249 aaKnown RBP7.12□□□□□ -1.27
SRP54YPR088C TOK1P40310 691 aa7.12□□□□□ -1.27
SRP54YPR088C PLP1Q04004 230 aa7.12□□□□□ -1.27
SRP54YPR088C YMR254CQ04838 102 aa7.12□□□□□ -1.27
SRP54YPR088C RRP15Q06511 250 aaPredicted RBP7.12□□□□□ -1.27
SRP54YPR088C SCP1Q08873 200 aa7.12□□□□□ -1.27
SRP54YPR088C UBA3Q99344 299 aa7.12□□□□□ -1.27
SRP54YPR088C GAL1P04385 528 aa7.12□□□□□ -1.27
SRP54YPR088C YLL053CP0CD98 152 aa7.12□□□□□ -1.27
SRP54YPR088C PET122P10355 254 aa7.12□□□□□ -1.27
SRP54YPR088C CKS1P20486 150 aaKnown RBP7.12□□□□□ -1.27
SRP54YPR088C OCH1P31755 480 aa7.12□□□□□ -1.27
SRP54YPR088C PRS2P38620 318 aaKnown RBP7.12□□□□□ -1.27
SRP54YPR088C LNP1P38878 278 aa7.12□□□□□ -1.27
SRP54YPR088C YER137CP40083 148 aaKnown RBP7.12□□□□□ -1.27
SRP54YPR088C YMR144WP40214 342 aaKnown RBP7.12□□□□□ -1.27
SRP54YPR088C MRX5P47007 382 aa7.12□□□□□ -1.27
SRP54YPR088C GRC3Q07845 632 aa7.12□□□□□ -1.27
SRP54YPR088C MED4Q12343 284 aa7.12□□□□□ -1.27
SRP54YPR088C MPD1Q12404 318 aaKnown RBP7.12□□□□□ -1.27
SRP54YPR088C MIR1P23641 311 aaKnown RBP7.11□□□□□ -1.27
SRP54YPR088C SUA5P32579 426 aa7.11□□□□□ -1.27
SRP54YPR088C BFR1P38934 470 aaKnown RBP RIP-Chip data7.11□□□□□ -1.27 RIP-Chip
SRP54YPR088C YGR210CP42942 411 aa7.11□□□□□ -1.27
SRP54YPR088C TAF4P50105 388 aa7.11□□□□□ -1.27
SRP54YPR088C NIF3P53081 288 aa7.11□□□□□ -1.27
SRP54YPR088C CRZ1P53968 678 aa7.11□□□□□ -1.27
SRP54YPR088C CAB5Q03941 241 aa7.11□□□□□ -1.27
SRP54YPR088C RTT103Q05543 409 aa7.11□□□□□ -1.27
SRP54YPR088C YLR224WQ05947 369 aa7.11□□□□□ -1.27
SRP54YPR088C YNG1Q08465 219 aa7.11□□□□□ -1.27
SRP54YPR088C WHI5Q12416 295 aa7.11□□□□□ -1.27
SRP54YPR088C TFB5Q3E7C1 72 aaPredicted RBP7.11□□□□□ -1.27
SRP54YPR088C RPS23AP0CX29 145 aaKnown RBP7.1□□□□□ -1.27
SRP54YPR088C RPS23BP0CX30 145 aa7.1□□□□□ -1.27
SRP54YPR088C CUP1-1P0CX80 61 aa7.1□□□□□ -1.27
SRP54YPR088C CUP1-2P0CX81 61 aa7.1□□□□□ -1.27
SRP54YPR088C IMP1P28627 190 aa7.1□□□□□ -1.27
SRP54YPR088C YPC1P38298 316 aa7.1□□□□□ -1.27
SRP54YPR088C YGP1P38616 354 aaKnown RBP7.1□□□□□ -1.27
SRP54YPR088C LAG1P38703 411 aa7.1□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms