RNA–Protein interactions for RNA: YPL104W

MSD1, Transcript of Mitochondrial aspartyl-tRNA synthetase, yeastyeast

Gene MSD1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSD1YPL104W RNA14P25298 677 aaKnown RBP3.16□□□□□ -1.9
MSD1YPL104W SNC2P33328 115 aa3.16□□□□□ -1.9
MSD1YPL104W ELF1P36053 145 aa3.16□□□□□ -1.9
MSD1YPL104W FRM2P37261 193 aa3.16□□□□□ -1.9
MSD1YPL104W APL3P38065 1025 aa3.16□□□□□ -1.9
MSD1YPL104W ARO9P38840 513 aaPredicted RBP3.16□□□□□ -1.9
MSD1YPL104W LNP1P38878 278 aa3.16□□□□□ -1.9
MSD1YPL104W ERJ5P43613 295 aaPredicted RBP3.16□□□□□ -1.9
MSD1YPL104W YGR042WP53227 271 aa3.16□□□□□ -1.9
MSD1YPL104W FMP48P53233 369 aa3.16□□□□□ -1.9
MSD1YPL104W GIM3P53900 129 aa3.16□□□□□ -1.9
MSD1YPL104W RPL6AQ02326 176 aaKnown RBP3.16□□□□□ -1.9
MSD1YPL104W KAP120Q02932 1032 aa3.16□□□□□ -1.9
MSD1YPL104W HEM25Q07534 307 aa3.16□□□□□ -1.9
MSD1YPL104W TGS1Q12052 315 aa3.16□□□□□ -1.9
MSD1YPL104W RDI1Q12434 202 aa3.16□□□□□ -1.9
MSD1YPL104W FSH3Q99369 266 aa3.16□□□□□ -1.9
MSD1YPL104W YLR358CO13565 187 aa3.16□□□□□ -1.9
MSD1YPL104W TDH2P00358 332 aaKnown RBP3.16□□□□□ -1.9
MSD1YPL104W STF1P01098 86 aa3.16□□□□□ -1.9
MSD1YPL104W DFR1P07807 211 aaKnown RBP RIP-Chip data3.16□□□□□ -1.9not detected
MSD1YPL104W PRB1P09232 635 aa3.16□□□□□ -1.9
MSD1YPL104W YCP4P25349 247 aaKnown RBP3.16□□□□□ -1.9
MSD1YPL104W SER3P40054 469 aa3.16□□□□□ -1.9
MSD1YPL104W AVT7P40501 490 aa3.16□□□□□ -1.9
MSD1YPL104W BLM10P43583 2143 aa3.16□□□□□ -1.9
MSD1YPL104W GPI14P47088 403 aaKnown RBP3.16□□□□□ -1.9
MSD1YPL104W POP6P53218 158 aa3.16□□□□□ -1.9
MSD1YPL104W DIG2Q03373 323 aaKnown RBP3.16□□□□□ -1.9
MSD1YPL104W RVB1Q03940 463 aaKnown RBP3.16□□□□□ -1.9
MSD1YPL104W VBA1Q04301 562 aa3.16□□□□□ -1.9
MSD1YPL104W COA4Q05809 96 aa3.16□□□□□ -1.9
MSD1YPL104W YLR283WQ05867 314 aa3.16□□□□□ -1.9
MSD1YPL104W GAS2Q06135 555 aa3.16□□□□□ -1.9
MSD1YPL104W ORM2Q06144 216 aa3.16□□□□□ -1.9
MSD1YPL104W YLR031WQ07978 186 aa3.16□□□□□ -1.9
MSD1YPL104W SRL2Q12020 392 aa3.16□□□□□ -1.9
MSD1YPL104W PRS5Q12265 496 aaKnown RBP3.16□□□□□ -1.9
MSD1YPL104W YER175W-AQ8TGU4 54 aa3.16□□□□□ -1.9
MSD1YPL104W FLO9P39712 1322 aa3.16□□□□□ -1.9
MSD1YPL104W SGA1P08019 549 aa3.15□□□□□ -1.91
MSD1YPL104W RPL40AP0CH08 128 aaKnown RBP3.15□□□□□ -1.91
MSD1YPL104W RPL40BP0CH09 128 aaKnown RBP3.15□□□□□ -1.91
MSD1YPL104W RPL3P14126 387 aaKnown RBP3.15□□□□□ -1.91
MSD1YPL104W HXT2P23585 541 aa3.15□□□□□ -1.91
MSD1YPL104W PET18P25362 215 aa3.15□□□□□ -1.91
MSD1YPL104W ADH7P25377 361 aa3.15□□□□□ -1.91
MSD1YPL104W ERV1P27882 189 aa3.15□□□□□ -1.91
MSD1YPL104W AFG1P32317 509 aa3.15□□□□□ -1.91
MSD1YPL104W SOF1P33750 489 aaKnown RBP3.15□□□□□ -1.91
MSD1YPL104W YBR096WP38256 230 aa3.15□□□□□ -1.91
MSD1YPL104W SDH8P38345 138 aa3.15□□□□□ -1.91
MSD1YPL104W YER137CP40083 148 aaKnown RBP3.15□□□□□ -1.91
MSD1YPL104W SYG1P40528 902 aa3.15□□□□□ -1.91
MSD1YPL104W OTU1P43558 301 aa3.15□□□□□ -1.91
MSD1YPL104W LSM1P47017 172 aaKnown RBP3.15□□□□□ -1.91
MSD1YPL104W IKS1P47042 667 aa3.15□□□□□ -1.91
MSD1YPL104W LOH1P47055 219 aa3.15□□□□□ -1.91
MSD1YPL104W BXI1P48558 297 aa3.15□□□□□ -1.91
MSD1YPL104W UBC11P52492 156 aa3.15□□□□□ -1.91
MSD1YPL104W PCP1P53259 346 aa3.15□□□□□ -1.91
MSD1YPL104W ATG4P53867 494 aa3.15□□□□□ -1.91
MSD1YPL104W MRPL22P53881 309 aa3.15□□□□□ -1.91
MSD1YPL104W NRK1P53915 240 aa3.15□□□□□ -1.91
MSD1YPL104W BUD25P85052 153 aa3.15□□□□□ -1.91
MSD1YPL104W PLP1Q04004 230 aa3.15□□□□□ -1.91
MSD1YPL104W DLT1Q04216 342 aa3.15□□□□□ -1.91
MSD1YPL104W HNT1Q04344 158 aaKnown RBP3.15□□□□□ -1.91
MSD1YPL104W YOR385WQ08909 290 aa3.15□□□□□ -1.91
MSD1YPL104W TMS1Q12116 473 aa3.15□□□□□ -1.91
MSD1YPL104W YRM1Q12340 786 aa3.15□□□□□ -1.91
MSD1YPL104W ODC2Q99297 307 aa3.15□□□□□ -1.91
MSD1YPL104W SEC16P48415 2195 aaKnown RBP3.15□□□□□ -1.91
MSD1YPL104W MES1P00958 751 aaKnown RBP3.14□□□□□ -1.91
MSD1YPL104W CDC36P06100 191 aaPredicted RBP3.14□□□□□ -1.91
MSD1YPL104W MET3P08536 511 aa3.14□□□□□ -1.91
MSD1YPL104W URA6P15700 204 aa3.14□□□□□ -1.91
MSD1YPL104W SEC62P21825 274 aa3.14□□□□□ -1.91
MSD1YPL104W MRP17P28778 131 aa3.14□□□□□ -1.91
MSD1YPL104W TCM62P38228 572 aaKnown RBP3.14□□□□□ -1.91
MSD1YPL104W AIM3P38266 947 aaKnown RBP3.14□□□□□ -1.91
MSD1YPL104W YIL060WP40519 144 aa3.14□□□□□ -1.91
MSD1YPL104W CIN2P46670 268 aa3.14□□□□□ -1.91
MSD1YPL104W CTK2P46962 323 aa3.14□□□□□ -1.91
MSD1YPL104W RSM27P53305 110 aa3.14□□□□□ -1.91
MSD1YPL104W RSM23Q01163 450 aa3.14□□□□□ -1.91
MSD1YPL104W FRE3Q08905 711 aa3.14□□□□□ -1.91
MSD1YPL104W YPL272CQ08984 517 aa3.14□□□□□ -1.91
MSD1YPL104W TRM13Q12383 476 aa3.14□□□□□ -1.91
MSD1YPL104W LAS17Q12446 633 aa3.14□□□□□ -1.91
MSD1YPL104W YBR255C-AQ3E776 120 aa3.14□□□□□ -1.91
MSD1YPL104W Q0144Q9ZZW2 109 aa3.14□□□□□ -1.91
MSD1YPL104W ARG80P07249 177 aa3.14□□□□□ -1.91
MSD1YPL104W CBP6P07253 162 aaPredicted RBP3.14□□□□□ -1.91
MSD1YPL104W PCL1P24867 279 aa3.14□□□□□ -1.91
MSD1YPL104W YKL063CP35725 167 aa3.14□□□□□ -1.91
MSD1YPL104W RRF1P38771 230 aa3.14□□□□□ -1.91
MSD1YPL104W YIL169CP40442 995 aa3.14□□□□□ -1.91
MSD1YPL104W IDP2P41939 412 aa3.14□□□□□ -1.91
MSD1YPL104W YJL016WP47072 561 aa3.14□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 50.6 ms