RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W FMP46P36141 133 aaKnown RBP1.88□□□□□ -2.11
VPS16YPL045W SHE3P38272 425 aaKnown RBP1.88□□□□□ -2.11
VPS16YPL045W EFM1P38732 585 aa1.88□□□□□ -2.11
VPS16YPL045W YHB1P39676 399 aaKnown RBP1.88□□□□□ -2.11
VPS16YPL045W SEC72P39742 193 aaKnown RBP1.88□□□□□ -2.11
VPS16YPL045W YFL064CP43540 174 aa1.88□□□□□ -2.11
VPS16YPL045W YJR149WP47177 404 aa1.88□□□□□ -2.11
VPS16YPL045W RHO3Q00245 231 aaKnown RBP1.88□□□□□ -2.11
VPS16YPL045W RPL21AQ02753 160 aaKnown RBP1.88□□□□□ -2.11
VPS16YPL045W YMR244WQ04018 355 aa1.88□□□□□ -2.11
VPS16YPL045W FUS2Q05670 677 aa1.88□□□□□ -2.11
VPS16YPL045W SEI1Q06058 285 aa1.88□□□□□ -2.11
VPS16YPL045W HEM25Q07534 307 aa1.88□□□□□ -2.11
VPS16YPL045W YDR018CQ12185 396 aa1.88□□□□□ -2.11
VPS16YPL045W CMC2Q3E7A4 109 aa1.88□□□□□ -2.11
VPS16YPL045W SWI1P09547 1314 aa1.88□□□□□ -2.11
VPS16YPL045W TUS1Q06412 1307 aa1.88□□□□□ -2.11
VPS16YPL045W BCY1P07278 416 aaKnown RBP1.87□□□□□ -2.11
VPS16YPL045W YKR104WP0CE69 306 aa1.87□□□□□ -2.11
VPS16YPL045W IMP1P28627 190 aa1.87□□□□□ -2.11
VPS16YPL045W SGE1P33335 543 aa1.87□□□□□ -2.11
VPS16YPL045W POP8P38208 133 aa1.87□□□□□ -2.11
VPS16YPL045W OM14P38325 134 aa1.87□□□□□ -2.11
VPS16YPL045W YHR127WP38833 243 aaKnown RBP1.87□□□□□ -2.11
VPS16YPL045W BMT5P40493 336 aa1.87□□□□□ -2.11
VPS16YPL045W CPR7P47103 393 aa1.87□□□□□ -2.11
VPS16YPL045W NUP57P48837 541 aa1.87□□□□□ -2.11
VPS16YPL045W EFM5P53200 248 aaKnown RBP1.87□□□□□ -2.11
VPS16YPL045W SPG4Q04438 115 aa1.87□□□□□ -2.11
VPS16YPL045W PEX10Q05568 337 aa1.87□□□□□ -2.11
VPS16YPL045W GPM2Q12008 311 aa1.87□□□□□ -2.11
VPS16YPL045W YMR230W-AQ3E7B5 62 aa1.87□□□□□ -2.11
VPS16YPL045W RPL35AP0CX84 120 aaKnown RBP1.87□□□□□ -2.11
VPS16YPL045W RPL35BP0CX85 120 aaKnown RBP1.87□□□□□ -2.11
VPS16YPL045W SNA3P14359 133 aa1.87□□□□□ -2.11
VPS16YPL045W PHO80P20052 293 aa1.87□□□□□ -2.11
VPS16YPL045W PPH21P23594 369 aa1.87□□□□□ -2.11
VPS16YPL045W VPH2P32341 215 aa1.87□□□□□ -2.11
VPS16YPL045W FRT2P39734 528 aa1.87□□□□□ -2.11
VPS16YPL045W RRG9P40156 214 aa1.87□□□□□ -2.11
VPS16YPL045W UTP18P40362 594 aaPredicted RBP1.87□□□□□ -2.11
VPS16YPL045W IRC18P47056 224 aa1.87□□□□□ -2.11
VPS16YPL045W MCM22P47167 239 aa1.87□□□□□ -2.11
VPS16YPL045W PRP24P49960 444 aaKnown RBP1.87□□□□□ -2.11
VPS16YPL045W NSA1P53136 463 aaPredicted RBP1.87□□□□□ -2.11
VPS16YPL045W TOS8P53147 276 aa1.87□□□□□ -2.11
VPS16YPL045W YGL039WP53183 348 aaKnown RBP1.87□□□□□ -2.11
VPS16YPL045W MRS2Q01926 470 aa1.87□□□□□ -2.11
VPS16YPL045W INP1Q03694 420 aa1.87□□□□□ -2.11
VPS16YPL045W LIP2Q06005 328 aa1.87□□□□□ -2.11
VPS16YPL045W YAL063C-AQ3E791 96 aa1.87□□□□□ -2.11
VPS16YPL045W DPB2P24482 689 aaPredicted RBP1.86□□□□□ -2.11
VPS16YPL045W TIP20P33891 701 aa1.86□□□□□ -2.11
VPS16YPL045W DRE2P36152 348 aa1.86□□□□□ -2.11
VPS16YPL045W GGC1P38988 300 aa1.86□□□□□ -2.11
VPS16YPL045W IGD1P43598 195 aa1.86□□□□□ -2.11
VPS16YPL045W YLR152CP54072 576 aa1.86□□□□□ -2.11
VPS16YPL045W API2Q04413 109 aa1.86□□□□□ -2.11
VPS16YPL045W YPR147CQ06522 304 aaKnown RBP1.86□□□□□ -2.11
VPS16YPL045W TRM10Q12400 293 aa1.86□□□□□ -2.11
VPS16YPL045W CAT2P32796 670 aaKnown RBP1.86□□□□□ -2.11
VPS16YPL045W AST1P35183 429 aa1.86□□□□□ -2.11
VPS16YPL045W YIL012WP40551 113 aa1.86□□□□□ -2.11
VPS16YPL045W GAB1P41733 394 aa1.86□□□□□ -2.11
VPS16YPL045W YGL260WP53056 76 aa1.86□□□□□ -2.11
VPS16YPL045W FYV6P53913 173 aa1.86□□□□□ -2.11
VPS16YPL045W VHS1Q03785 461 aa1.86□□□□□ -2.11
VPS16YPL045W DXO1Q06349 442 aa1.86□□□□□ -2.11
VPS16YPL045W RRG7Q08774 242 aaPredicted RBP1.86□□□□□ -2.11
VPS16YPL045W TPO4Q12256 659 aa1.86□□□□□ -2.11
VPS16YPL045W YPL229WQ99395 206 aa1.86□□□□□ -2.11
VPS16YPL045W RPS19AP07280 144 aaKnown RBP1.85□□□□□ -2.11
VPS16YPL045W RPS19BP07281 144 aaPredicted RBP1.85□□□□□ -2.11
VPS16YPL045W URA6P15700 204 aa1.85□□□□□ -2.11
VPS16YPL045W SRY1P36007 326 aa1.85□□□□□ -2.11
VPS16YPL045W HMT1P38074 348 aa1.85□□□□□ -2.11
VPS16YPL045W SWD3P38123 315 aa1.85□□□□□ -2.11
VPS16YPL045W SMP1P38128 452 aa1.85□□□□□ -2.11
VPS16YPL045W TRM5P38793 499 aa1.85□□□□□ -2.11
VPS16YPL045W PGU1P47180 361 aa1.85□□□□□ -2.11
VPS16YPL045W OST3P48439 350 aa1.85□□□□□ -2.11
VPS16YPL045W BRR6P53062 197 aa1.85□□□□□ -2.11
VPS16YPL045W MRH4P53166 561 aa1.85□□□□□ -2.11
VPS16YPL045W AAH1P53909 347 aa1.85□□□□□ -2.11
VPS16YPL045W PAL1Q05518 499 aaKnown RBP1.85□□□□□ -2.11
VPS16YPL045W TIR4Q12218 487 aaPredicted RBP1.85□□□□□ -2.11
VPS16YPL045W COS2P0CX12 379 aa1.85□□□□□ -2.11
VPS16YPL045W COS3P0CX13 379 aa1.85□□□□□ -2.11
VPS16YPL045W ZRT3P34240 503 aa1.85□□□□□ -2.11
VPS16YPL045W MRPL39P36533 70 aa1.85□□□□□ -2.11
VPS16YPL045W YCR087C-AP37263 153 aa1.85□□□□□ -2.11
VPS16YPL045W YMR144WP40214 342 aaKnown RBP1.85□□□□□ -2.11
VPS16YPL045W COS4P43542 379 aa1.85□□□□□ -2.11
VPS16YPL045W EAF6P47128 113 aa1.85□□□□□ -2.11
VPS16YPL045W YGL034CP53186 121 aa1.85□□□□□ -2.11
VPS16YPL045W SYF2P53277 215 aaPredicted RBP1.85□□□□□ -2.11
VPS16YPL045W ACT1P60010 375 aaKnown RBP1.85□□□□□ -2.11
VPS16YPL045W RRP40Q08285 240 aaKnown RBP1.85□□□□□ -2.11
VPS16YPL045W YOR186WQ08560 144 aa1.85□□□□□ -2.11
VPS16YPL045W RAX2Q12465 1220 aa1.85□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms