RNA–Protein interactions for RNA: YNL024C-A

KSH1, Transcript of Essential protein suggested to function early in the secretory pathway, yeastyeast

Gene KSH1, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KSH1YNL024C-A CPR3P25719 182 aa5.67□□□□□ -1.5
KSH1YNL024C-A VMA5P31412 392 aaKnown RBP5.67□□□□□ -1.5
KSH1YNL024C-A FMT1P32785 401 aa5.67□□□□□ -1.5
KSH1YNL024C-A MRPL36P36531 177 aa5.67□□□□□ -1.5
KSH1YNL024C-A GEP4P38812 185 aa5.67□□□□□ -1.5
KSH1YNL024C-A MOB2P43563 287 aa5.67□□□□□ -1.5
KSH1YNL024C-A NIT3P49954 291 aa5.67□□□□□ -1.5
KSH1YNL024C-A AVT4P50944 713 aa5.67□□□□□ -1.5
KSH1YNL024C-A YGL159WP53110 370 aa5.67□□□□□ -1.5
KSH1YNL024C-A TYW3P53177 273 aa5.67□□□□□ -1.5
KSH1YNL024C-A SPR28Q04921 423 aa5.67□□□□□ -1.5
KSH1YNL024C-A SYM1Q06563 197 aa5.67□□□□□ -1.5
KSH1YNL024C-A AEP3Q12089 606 aa5.67□□□□□ -1.5
KSH1YNL024C-A MSL5Q12186 476 aaKnown RBP RIP-Chip data5.67□□□□□ -1.5not detected
KSH1YNL024C-A FLO9P39712 1322 aa5.67□□□□□ -1.5
KSH1YNL024C-A GAL1P04385 528 aa5.66□□□□□ -1.5
KSH1YNL024C-A MRPL33P20084 86 aa5.66□□□□□ -1.5
KSH1YNL024C-A YCR101CP25607 182 aa5.66□□□□□ -1.5
KSH1YNL024C-A ARO4P32449 370 aaKnown RBP5.66□□□□□ -1.5
KSH1YNL024C-A PAN3P36102 679 aaPredicted RBP5.66□□□□□ -1.5
KSH1YNL024C-A BMT5P40493 336 aa5.66□□□□□ -1.5
KSH1YNL024C-A IKS1P47042 667 aa5.66□□□□□ -1.5
KSH1YNL024C-A PHB2P50085 310 aa5.66□□□□□ -1.5
KSH1YNL024C-A NIF3P53081 288 aa5.66□□□□□ -1.5
KSH1YNL024C-A NSA1P53136 463 aaPredicted RBP5.66□□□□□ -1.5
KSH1YNL024C-A ATG4P53867 494 aa5.66□□□□□ -1.5
KSH1YNL024C-A BUD25P85052 153 aa5.66□□□□□ -1.5
KSH1YNL024C-A YDR391CQ04170 232 aa5.66□□□□□ -1.5
KSH1YNL024C-A YLR352WQ06479 807 aa5.66□□□□□ -1.5
KSH1YNL024C-A RFU1Q08003 200 aa5.66□□□□□ -1.5
KSH1YNL024C-A SCP1Q08873 200 aa5.66□□□□□ -1.5
KSH1YNL024C-A FEX2Q08991 375 aa5.66□□□□□ -1.5
KSH1YNL024C-A IZH2Q12442 317 aa5.66□□□□□ -1.5
KSH1YNL024C-A FMP16Q12497 93 aa5.66□□□□□ -1.5
KSH1YNL024C-A TFB5Q3E7C1 72 aaPredicted RBP5.66□□□□□ -1.5
KSH1YNL024C-A Q0144Q9ZZW2 109 aa5.66□□□□□ -1.5
KSH1YNL024C-A UTP20P35194 2493 aaKnown RBP5.65□□□□□ -1.5
KSH1YNL024C-A YBR085C-AO43137 85 aa5.65□□□□□ -1.5
KSH1YNL024C-A CDC28P00546 298 aaKnown RBP5.65□□□□□ -1.5
KSH1YNL024C-A SGA1P08019 549 aa5.65□□□□□ -1.5
KSH1YNL024C-A RPS16AP0CX51 143 aaKnown RBP5.65□□□□□ -1.5
KSH1YNL024C-A RPS16BP0CX52 143 aaKnown RBP5.65□□□□□ -1.5
KSH1YNL024C-A ERG4P25340 473 aa5.65□□□□□ -1.5
KSH1YNL024C-A VMA3P25515 160 aa5.65□□□□□ -1.5
KSH1YNL024C-A YCR061WP25639 631 aa5.65□□□□□ -1.5
KSH1YNL024C-A ERG3P32353 365 aa5.65□□□□□ -1.5
KSH1YNL024C-A YBR197CP38306 217 aa5.65□□□□□ -1.5
KSH1YNL024C-A PRY1P47032 299 aa5.65□□□□□ -1.5
KSH1YNL024C-A YJL016WP47072 561 aa5.65□□□□□ -1.5
KSH1YNL024C-A YGL260WP53056 76 aa5.65□□□□□ -1.5
KSH1YNL024C-A TNA1P53322 534 aa5.65□□□□□ -1.5
KSH1YNL024C-A DID2P69771 204 aa5.65□□□□□ -1.5
KSH1YNL024C-A HAS1Q03532 505 aaKnown RBP5.65□□□□□ -1.5
KSH1YNL024C-A YML018CQ03730 393 aa5.65□□□□□ -1.5
KSH1YNL024C-A COQ11Q05892 277 aa5.65□□□□□ -1.5
KSH1YNL024C-A NOC4Q06512 552 aaPredicted RBP5.65□□□□□ -1.5
KSH1YNL024C-A YPL272CQ08984 517 aa5.65□□□□□ -1.5
KSH1YNL024C-A VAM3Q12241 283 aa5.65□□□□□ -1.5
KSH1YNL024C-A YDL180WQ12301 547 aa5.65□□□□□ -1.5
KSH1YNL024C-A COX5BP00425 151 aa5.64□□□□□ -1.51
KSH1YNL024C-A RFA1P22336 621 aaKnown RBP5.64□□□□□ -1.51
KSH1YNL024C-A SED4P25365 1065 aa5.64□□□□□ -1.51
KSH1YNL024C-A PEX4P29340 183 aa5.64□□□□□ -1.51
KSH1YNL024C-A DEG1P31115 442 aaKnown RBP5.64□□□□□ -1.51
KSH1YNL024C-A VMA8P32610 256 aaKnown RBP5.64□□□□□ -1.51
KSH1YNL024C-A PRM5P40476 318 aa5.64□□□□□ -1.51
KSH1YNL024C-A SRB7P47822 140 aa5.64□□□□□ -1.51
KSH1YNL024C-A ALG9P53868 555 aaKnown RBP5.64□□□□□ -1.51
KSH1YNL024C-A YDR248CQ03786 193 aa5.64□□□□□ -1.51
KSH1YNL024C-A ANT1Q06497 328 aa5.64□□□□□ -1.51
KSH1YNL024C-A YBR298C-AQ8TGK4 73 aa5.64□□□□□ -1.51
KSH1YNL024C-A BLM10P43583 2143 aa5.63□□□□□ -1.51
KSH1YNL024C-A RPL7AP05737 244 aaKnown RBP5.63□□□□□ -1.51
KSH1YNL024C-A RPL43AP0CX25 92 aaKnown RBP5.63□□□□□ -1.51
KSH1YNL024C-A RPL43BP0CX26 92 aa5.63□□□□□ -1.51
KSH1YNL024C-A YBL010CP32788 280 aa5.63□□□□□ -1.51
KSH1YNL024C-A REC114P32841 428 aa5.63□□□□□ -1.51
KSH1YNL024C-A MOH1P38191 138 aa5.63□□□□□ -1.51
KSH1YNL024C-A ARC40P38328 384 aaKnown RBP5.63□□□□□ -1.51
KSH1YNL024C-A COS8P38723 381 aa5.63□□□□□ -1.51
KSH1YNL024C-A GWT1P47026 490 aa5.63□□□□□ -1.51
KSH1YNL024C-A ADO1P47143 340 aaKnown RBP5.63□□□□□ -1.51
KSH1YNL024C-A YAP6Q03935 383 aa5.63□□□□□ -1.51
KSH1YNL024C-A CAB5Q03941 241 aa5.63□□□□□ -1.51
KSH1YNL024C-A RPL7BQ12213 244 aaKnown RBP5.63□□□□□ -1.51
KSH1YNL024C-A MED4Q12343 284 aa5.63□□□□□ -1.51
KSH1YNL024C-A UBA3Q99344 299 aa5.63□□□□□ -1.51
KSH1YNL024C-A QCR2P07257 368 aa5.62□□□□□ -1.51
KSH1YNL024C-A MET3P08536 511 aa5.62□□□□□ -1.51
KSH1YNL024C-A MIR1P23641 311 aaKnown RBP5.62□□□□□ -1.51
KSH1YNL024C-A POP8P38208 133 aa5.62□□□□□ -1.51
KSH1YNL024C-A ALG14P38242 237 aa5.62□□□□□ -1.51
KSH1YNL024C-A CCS1P40202 249 aaKnown RBP5.62□□□□□ -1.51
KSH1YNL024C-A SSN8P47821 323 aa5.62□□□□□ -1.51
KSH1YNL024C-A JAC1P53193 184 aa5.62□□□□□ -1.51
KSH1YNL024C-A ACT1P60010 375 aaKnown RBP5.62□□□□□ -1.51
KSH1YNL024C-A SRP1Q02821 542 aaKnown RBP5.62□□□□□ -1.51
KSH1YNL024C-A RTT103Q05543 409 aa5.62□□□□□ -1.51
KSH1YNL024C-A YOL029CQ08187 201 aa5.62□□□□□ -1.51
KSH1YNL024C-A MRP10O75012 95 aa5.61□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 178.9 ms