RNA–Protein interactions for RNA: YMR159C

ATG16, Transcript of Conserved protein involved in autophagy, yeastyeast

Gene ATG16, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG16YMR159C YPL257WQ08974 193 aa2.26□□□□□ -2.05
ATG16YMR159C YOR029WQ12243 111 aa2.26□□□□□ -2.05
ATG16YMR159C FKS1P38631 1876 aaKnown RBP2.25□□□□□ -2.05
ATG16YMR159C FBA1P14540 359 aaKnown RBP2.25□□□□□ -2.05
ATG16YMR159C FIS1P40515 155 aa2.25□□□□□ -2.05
ATG16YMR159C YJR079WP47126 109 aa2.25□□□□□ -2.05
ATG16YMR159C RHO3Q00245 231 aaKnown RBP2.25□□□□□ -2.05
ATG16YMR159C KRE28Q04431 385 aa2.25□□□□□ -2.05
ATG16YMR159C SEI1Q06058 285 aa2.25□□□□□ -2.05
ATG16YMR159C YLR173WQ06247 608 aa2.25□□□□□ -2.05
ATG16YMR159C ERD2P18414 219 aa2.24□□□□□ -2.05
ATG16YMR159C SCL1P21243 252 aaKnown RBP2.24□□□□□ -2.05
ATG16YMR159C PEX4P29340 183 aa2.24□□□□□ -2.05
ATG16YMR159C MDH3P32419 343 aaKnown RBP RIP-Chip data2.24□□□□□ -2.05not detected
ATG16YMR159C BNA6P43619 295 aa2.24□□□□□ -2.05
ATG16YMR159C HOC1P47124 396 aa2.24□□□□□ -2.05
ATG16YMR159C JHD2P47156 728 aaPredicted RBP2.24□□□□□ -2.05
ATG16YMR159C MRPL50P53724 139 aa2.24□□□□□ -2.05
ATG16YMR159C ATG31Q12421 196 aa2.24□□□□□ -2.05
ATG16YMR159C HTL1Q9URQ5 78 aa2.24□□□□□ -2.05
ATG16YMR159C INO80P53115 1489 aa2.23□□□□□ -2.05
ATG16YMR159C DSF1P0CX08 502 aa2.23□□□□□ -2.05
ATG16YMR159C YNR073CP0CX09 502 aa2.23□□□□□ -2.05
ATG16YMR159C SNA3P14359 133 aa2.23□□□□□ -2.05
ATG16YMR159C YPT52P36018 234 aaKnown RBP2.23□□□□□ -2.05
ATG16YMR159C YJR056CP47115 236 aa2.23□□□□□ -2.05
ATG16YMR159C HAM1P47119 197 aaKnown RBP2.23□□□□□ -2.05
ATG16YMR159C SRL4Q03085 281 aa2.23□□□□□ -2.05
ATG16YMR159C MRPS8Q03799 155 aa2.23□□□□□ -2.05
ATG16YMR159C PAM18Q07914 168 aa2.23□□□□□ -2.05
ATG16YMR159C MED4Q12343 284 aa2.23□□□□□ -2.05
ATG16YMR159C ATO3Q12359 275 aa2.23□□□□□ -2.05
ATG16YMR159C BEM2P39960 2167 aaKnown RBP2.23□□□□□ -2.05
ATG16YMR159C SIR4P11978 1358 aa2.23□□□□□ -2.05
ATG16YMR159C IPP1P00817 287 aaKnown RBP2.22□□□□□ -2.05
ATG16YMR159C RPL9AP05738 191 aaKnown RBP2.22□□□□□ -2.05
ATG16YMR159C YFR054CP43622 192 aa2.22□□□□□ -2.05
ATG16YMR159C RPL9BP51401 191 aaKnown RBP2.22□□□□□ -2.05
ATG16YMR159C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.22□□□□□ -2.05not detected
ATG16YMR159C VMA11P32842 164 aa2.21□□□□□ -2.06
ATG16YMR159C RPF1P38805 295 aaKnown RBP2.21□□□□□ -2.06
ATG16YMR159C PEP8P40335 379 aa2.21□□□□□ -2.06
ATG16YMR159C RSM25P40496 264 aa2.21□□□□□ -2.06
ATG16YMR159C RPA43P46669 326 aa2.21□□□□□ -2.06
ATG16YMR159C ILM1P47155 203 aa2.21□□□□□ -2.06
ATG16YMR159C YGR219WP53307 113 aa2.21□□□□□ -2.06
ATG16YMR159C YNL134CP53912 376 aaKnown RBP2.21□□□□□ -2.06
ATG16YMR159C YOR020W-AQ3E824 90 aa2.21□□□□□ -2.06
ATG16YMR159C RAS2P01120 322 aaKnown RBP2.2□□□□□ -2.06
ATG16YMR159C TCP1P12612 559 aaKnown RBP2.2□□□□□ -2.06
ATG16YMR159C GRX2P17695 143 aaKnown RBP2.2□□□□□ -2.06
ATG16YMR159C RPS5P26783 225 aaKnown RBP2.2□□□□□ -2.06
ATG16YMR159C YMR144WP40214 342 aaKnown RBP2.2□□□□□ -2.06
ATG16YMR159C FMC1P40491 155 aa2.2□□□□□ -2.06
ATG16YMR159C PHO88P38264 188 aaPredicted RBP2.19□□□□□ -2.06
ATG16YMR159C CIS3P47001 227 aa2.19□□□□□ -2.06
ATG16YMR159C ERG25P53045 309 aa2.19□□□□□ -2.06
ATG16YMR159C NEJ1Q06148 342 aa2.19□□□□□ -2.06
ATG16YMR159C ATG39Q06159 398 aa2.19□□□□□ -2.06
ATG16YMR159C ARR2Q06597 130 aa2.19□□□□□ -2.06
ATG16YMR159C MSA1Q08471 629 aa2.19□□□□□ -2.06
ATG16YMR159C NIP7Q08962 181 aaKnown RBP2.19□□□□□ -2.06
ATG16YMR159C USB1Q12208 290 aaKnown RBP2.19□□□□□ -2.06
ATG16YMR159C YPL229WQ99395 206 aa2.19□□□□□ -2.06
ATG16YMR159C MSW1P04803 379 aa2.18□□□□□ -2.06
ATG16YMR159C CDC7P06243 507 aa2.18□□□□□ -2.06
ATG16YMR159C RPO26P20435 155 aa2.18□□□□□ -2.06
ATG16YMR159C OAC1P32332 324 aa2.18□□□□□ -2.06
ATG16YMR159C LSM4P40070 187 aaKnown RBP2.18□□□□□ -2.06
ATG16YMR159C YKE4P40544 346 aa2.18□□□□□ -2.06
ATG16YMR159C TPO4Q12256 659 aa2.18□□□□□ -2.06
ATG16YMR159C ECM33P38248 429 aaKnown RBP2.17□□□□□ -2.06
ATG16YMR159C ERV15P38312 142 aa2.17□□□□□ -2.06
ATG16YMR159C YAR068WP39564 161 aa2.17□□□□□ -2.06
ATG16YMR159C CAT5P41735 233 aa2.17□□□□□ -2.06
ATG16YMR159C MCM22P47167 239 aa2.17□□□□□ -2.06
ATG16YMR159C NUP84P52891 726 aa2.17□□□□□ -2.06
ATG16YMR159C RRN5Q02983 363 aa2.17□□□□□ -2.06
ATG16YMR159C YLR283WQ05867 314 aa2.17□□□□□ -2.06
ATG16YMR159C HEM25Q07534 307 aa2.17□□□□□ -2.06
ATG16YMR159C YLR126CQ12288 251 aa2.17□□□□□ -2.06
ATG16YMR159C MRPL25P23369 157 aa2.16□□□□□ -2.06
ATG16YMR159C YHR022CP38763 256 aa2.16□□□□□ -2.06
ATG16YMR159C BMT5P40493 336 aa2.16□□□□□ -2.06
ATG16YMR159C YJR149WP47177 404 aa2.16□□□□□ -2.06
ATG16YMR159C DID2P69771 204 aa2.16□□□□□ -2.06
ATG16YMR159C ABF2Q02486 183 aa2.16□□□□□ -2.06
ATG16YMR159C FCY2P17064 533 aa2.15□□□□□ -2.07
ATG16YMR159C MDH2P22133 377 aa2.15□□□□□ -2.07
ATG16YMR159C DSE2P38844 325 aa2.15□□□□□ -2.07
ATG16YMR159C YHR180WP38868 163 aa2.15□□□□□ -2.07
ATG16YMR159C YER135CP40082 130 aa2.15□□□□□ -2.07
ATG16YMR159C CYT2Q00873 224 aa2.15□□□□□ -2.07
ATG16YMR159C YML096WQ04489 525 aa2.15□□□□□ -2.07
ATG16YMR159C SSQ1Q05931 657 aaPredicted RBP2.15□□□□□ -2.07
ATG16YMR159C DDI2P0CH63 225 aa2.14□□□□□ -2.07
ATG16YMR159C DDI3P0CH64 225 aa2.14□□□□□ -2.07
ATG16YMR159C RIB1P38066 345 aa2.14□□□□□ -2.07
ATG16YMR159C YBR063CP38083 404 aa2.14□□□□□ -2.07
ATG16YMR159C LDB7P38210 180 aa2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 8.8 ms