RNA–Protein interactions for RNA: YIL156W

UBP7, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeast

Gene UBP7, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP7	YIL156W	ATG15	P25641	520 aa		4.21	□□□□□ -1.73
UBP7	YIL156W	MRPL28	P36527	147 aa		4.21	□□□□□ -1.73
UBP7	YIL156W	HAC1	P41546	238 aa		4.21	□□□□□ -1.73
UBP7	YIL156W	SCS3	P53012	380 aa		4.21	□□□□□ -1.73
UBP7	YIL156W	ECM11	Q04110	302 aa		4.21	□□□□□ -1.73
UBP7	YIL156W	YPR147C	Q06522	304 aa	Known RBP	4.21	□□□□□ -1.73
UBP7	YIL156W	ATP16	Q12165	160 aa		4.21	□□□□□ -1.73
UBP7	YIL156W	AGC1	Q12482	902 aa		4.21	□□□□□ -1.73
UBP7	YIL156W	TRP1	P00912	224 aa		4.21	□□□□□ -1.74
UBP7	YIL156W	MET2	P08465	486 aa		4.21	□□□□□ -1.74
UBP7	YIL156W	DPM1	P14020	267 aa	Known RBP	4.21	□□□□□ -1.74
UBP7	YIL156W	MBA1	P38300	278 aa		4.21	□□□□□ -1.74
UBP7	YIL156W	YNR066C	P53752	436 aa		4.21	□□□□□ -1.74
UBP7	YIL156W	RIF2	Q06208	395 aa		4.21	□□□□□ -1.74
UBP7	YIL156W	YPL245W	Q12179	454 aa	Known RBP	4.21	□□□□□ -1.74
UBP7	YIL156W	GSC2	P40989	1895 aa		4.21	□□□□□ -1.74
UBP7	YIL156W	URA10	P30402	227 aa		4.21	□□□□□ -1.74
UBP7	YIL156W	TRS65	P32893	560 aa		4.21	□□□□□ -1.74
UBP7	YIL156W	AGE2	P40529	298 aa		4.21	□□□□□ -1.74
UBP7	YIL156W	SDC1	Q03323	175 aa		4.21	□□□□□ -1.74
UBP7	YIL156W	HCR1	Q05775	265 aa	Known RBP	4.21	□□□□□ -1.74
UBP7	YIL156W	RPS28B	P0C0X0	67 aa	Known RBP	4.2	□□□□□ -1.74
UBP7	YIL156W	YMR144W	P40214	342 aa	Known RBP	4.2	□□□□□ -1.74
UBP7	YIL156W	NQM1	P53228	333 aa	Predicted RBP	4.2	□□□□□ -1.74
UBP7	YIL156W	DXO1	Q06349	442 aa		4.2	□□□□□ -1.74
UBP7	YIL156W	HMS1	Q12398	434 aa		4.2	□□□□□ -1.74
UBP7	YIL156W	RPS28A	Q3E7X9	67 aa	Predicted RBP	4.2	□□□□□ -1.74
UBP7	YIL156W	HKR1	P41809	1802 aa		4.2	□□□□□ -1.74
UBP7	YIL156W	ISY1	P21374	235 aa	Predicted RBP	4.2	□□□□□ -1.74
UBP7	YIL156W	RPR2	P40571	144 aa		4.2	□□□□□ -1.74
UBP7	YIL156W	NUP49	Q02199	472 aa		4.2	□□□□□ -1.74
UBP7	YIL156W	FSH2	Q05015	223 aa		4.2	□□□□□ -1.74
UBP7	YIL156W	INM2	Q05533	292 aa		4.2	□□□□□ -1.74
UBP7	YIL156W	NSL1	Q12143	216 aa		4.2	□□□□□ -1.74
UBP7	YIL156W	CDC28	P00546	298 aa	Known RBP	4.19	□□□□□ -1.74
UBP7	YIL156W	YFL068W	P0CX99	160 aa		4.19	□□□□□ -1.74
UBP7	YIL156W	YLL066W-A	P0CY00	160 aa		4.19	□□□□□ -1.74
UBP7	YIL156W	YLL067W-A	P0CY01	160 aa		4.19	□□□□□ -1.74
UBP7	YIL156W	ECM33	P38248	429 aa	Known RBP	4.19	□□□□□ -1.74
UBP7	YIL156W	YHL049C	P38722	271 aa		4.19	□□□□□ -1.74
UBP7	YIL156W	PRM10	P42946	383 aa		4.19	□□□□□ -1.74
UBP7	YIL156W	YFH7	P43591	353 aa		4.19	□□□□□ -1.74
UBP7	YIL156W	CPR7	P47103	393 aa		4.19	□□□□□ -1.74
UBP7	YIL156W	COG7	P53195	279 aa		4.19	□□□□□ -1.74
UBP7	YIL156W	YMR315W	Q04869	349 aa	Known RBP	4.19	□□□□□ -1.74
UBP7	YIL156W	CPR1	P14832	162 aa	Known RBP	4.19	□□□□□ -1.74
UBP7	YIL156W	YKR041W	P36134	250 aa		4.19	□□□□□ -1.74
UBP7	YIL156W	BXI1	P48558	297 aa		4.19	□□□□□ -1.74
UBP7	YIL156W	YOR292C	Q08743	309 aa		4.19	□□□□□ -1.74
UBP7	YIL156W	EMP46	Q12396	444 aa		4.19	□□□□□ -1.74
UBP7	YIL156W	RPS24A	P0CX31	135 aa	Known RBP	4.19	□□□□□ -1.74
UBP7	YIL156W	RPS24B	P0CX32	135 aa	Known RBP	4.19	□□□□□ -1.74
UBP7	YIL156W	GCN3	P14741	305 aa		4.19	□□□□□ -1.74
UBP7	YIL156W	CUP2	P15315	225 aa		4.19	□□□□□ -1.74
UBP7	YIL156W	YER076C	P40049	302 aa		4.19	□□□□□ -1.74
UBP7	YIL156W	ABF2	Q02486	183 aa		4.19	□□□□□ -1.74
UBP7	YIL156W	RRP40	Q08285	240 aa	Known RBP	4.19	□□□□□ -1.74
UBP7	YIL156W	YMR316C-A	I2HB70	103 aa		4.18	□□□□□ -1.74
UBP7	YIL156W	PHO2	P07269	559 aa		4.18	□□□□□ -1.74
UBP7	YIL156W	TAH1	P25638	111 aa	Predicted RBP	4.18	□□□□□ -1.74
UBP7	YIL156W	RPN8	Q08723	338 aa	Known RBP	4.18	□□□□□ -1.74
UBP7	YIL156W	OAC1	P32332	324 aa		4.18	□□□□□ -1.74
UBP7	YIL156W	RSM25	P40496	264 aa		4.18	□□□□□ -1.74
UBP7	YIL156W	YJL213W	P40896	331 aa		4.18	□□□□□ -1.74
UBP7	YIL156W	YJR085C	P47131	105 aa	Known RBP	4.18	□□□□□ -1.74
UBP7	YIL156W	YGR042W	P53227	271 aa		4.18	□□□□□ -1.74
UBP7	YIL156W	ARO80	Q04052	950 aa		4.18	□□□□□ -1.74
UBP7	YIL156W	YOR283W	Q12040	230 aa	Known RBP	4.18	□□□□□ -1.74
UBP7	YIL156W	RIO1	Q12196	484 aa	Known RBP	4.18	□□□□□ -1.74
UBP7	YIL156W	SEN34	P39707	275 aa		4.17	□□□□□ -1.74
UBP7	YIL156W	UBP5	P39944	805 aa		4.17	□□□□□ -1.74
UBP7	YIL156W	AVT7	P40501	490 aa		4.17	□□□□□ -1.74
UBP7	YIL156W	ERP1	Q05359	219 aa	Known RBP	4.17	□□□□□ -1.74
UBP7	YIL156W	NOT5	Q12514	560 aa	Predicted RBP	4.17	□□□□□ -1.74
UBP7	YIL156W	HHF1	P02309	103 aa	Known RBP	4.17	□□□□□ -1.74
UBP7	YIL156W	RPL15A	P05748	204 aa	Known RBP	4.17	□□□□□ -1.74
UBP7	YIL156W	MRPL39	P36533	70 aa		4.17	□□□□□ -1.74
UBP7	YIL156W	EDC3	P39998	551 aa	Known RBP	4.17	□□□□□ -1.74
UBP7	YIL156W	ERV2	Q12284	196 aa		4.17	□□□□□ -1.74
UBP7	YIL156W	SFM1	Q12314	213 aa		4.17	□□□□□ -1.74
UBP7	YIL156W	HRT3	Q12347	344 aa		4.17	□□□□□ -1.74
UBP7	YIL156W	YPL229W	Q99395	206 aa		4.17	□□□□□ -1.74
UBP7	YIL156W	MSI1	P13712	422 aa		4.17	□□□□□ -1.74
UBP7	YIL156W	CAM1	P29547	415 aa	Known RBP	4.17	□□□□□ -1.74
UBP7	YIL156W	LDS1	P31379	325 aa		4.17	□□□□□ -1.74
UBP7	YIL156W	LSM12	P38828	187 aa	Known RBP	4.17	□□□□□ -1.74
UBP7	YIL156W	MDV1	P47025	714 aa		4.17	□□□□□ -1.74
UBP7	YIL156W	WSC2	P53832	503 aa		4.17	□□□□□ -1.74
UBP7	YIL156W	YLR036C	Q07986	203 aa		4.17	□□□□□ -1.74
UBP7	YIL156W	YLR050C	Q12155	161 aa	Known RBP	4.17	□□□□□ -1.74
UBP7	YIL156W	ADE6	P38972	1358 aa	Known RBP	4.16	□□□□□ -1.74
UBP7	YIL156W	GRX2	P17695	143 aa	Known RBP	4.16	□□□□□ -1.74
UBP7	YIL156W	YCR025C	P25352	136 aa		4.16	□□□□□ -1.74
UBP7	YIL156W	PRM5	P40476	318 aa		4.16	□□□□□ -1.74
UBP7	YIL156W	CRZ1	P53968	678 aa		4.16	□□□□□ -1.74
UBP7	YIL156W	ADD37	Q03233	198 aa		4.16	□□□□□ -1.74
UBP7	YIL156W	MRS1	P07266	363 aa		4.16	□□□□□ -1.74
UBP7	YIL156W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
UBP7	YIL156W	FRM2	P37261	193 aa		4.16	□□□□□ -1.74
UBP7	YIL156W	PTI1	P39927	425 aa	Predicted RBP	4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms