RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W MDM34P53083 459 aa1.5□□□□□ -2.17
SMD1YGR074W YMD8Q03697 442 aa1.5□□□□□ -2.17
SMD1YGR074W FAR8Q05040 523 aa1.5□□□□□ -2.17
SMD1YGR074W JLP1Q12358 412 aa1.5□□□□□ -2.17
SMD1YGR074W YPL247CQ12523 523 aa1.5□□□□□ -2.17
SMD1YGR074W HTL1Q9URQ5 78 aa1.5□□□□□ -2.17
SMD1YGR074W SIR4P11978 1358 aa1.49□□□□□ -2.17
SMD1YGR074W COX5AP00424 153 aa1.49□□□□□ -2.17
SMD1YGR074W CDC36P06100 191 aaPredicted RBP1.49□□□□□ -2.17
SMD1YGR074W TOM40P23644 387 aaKnown RBP1.49□□□□□ -2.17
SMD1YGR074W EHD3P28817 500 aa1.49□□□□□ -2.17
SMD1YGR074W SIP3P38717 1229 aa1.49□□□□□ -2.17
SMD1YGR074W FIS1P40515 155 aa1.49□□□□□ -2.17
SMD1YGR074W HAM1P47119 197 aaKnown RBP1.49□□□□□ -2.17
SMD1YGR074W RAD17P48581 401 aa1.49□□□□□ -2.17
SMD1YGR074W NUP57P48837 541 aa1.49□□□□□ -2.17
SMD1YGR074W GRH1Q04410 372 aaKnown RBP1.49□□□□□ -2.17
SMD1YGR074W YMR114CQ04471 368 aaKnown RBP1.49□□□□□ -2.17
SMD1YGR074W YML096WQ04489 525 aa1.49□□□□□ -2.17
SMD1YGR074W FEX1Q08913 375 aa1.49□□□□□ -2.17
SMD1YGR074W FEX2Q08991 375 aa1.49□□□□□ -2.17
SMD1YGR074W YRA1Q12159 226 aaKnown RBP1.49□□□□□ -2.17
SMD1YGR074W YOR020W-AQ3E824 90 aa1.49□□□□□ -2.17
SMD1YGR074W SPT3P06844 337 aa1.48□□□□□ -2.17
SMD1YGR074W DSF1P0CX08 502 aa1.48□□□□□ -2.17
SMD1YGR074W YNR073CP0CX09 502 aa1.48□□□□□ -2.17
SMD1YGR074W SNA3P14359 133 aa1.48□□□□□ -2.17
SMD1YGR074W FCY2P17064 533 aa1.48□□□□□ -2.17
SMD1YGR074W MIG1P27705 504 aa1.48□□□□□ -2.17
SMD1YGR074W ERG24P32462 438 aaKnown RBP1.48□□□□□ -2.17
SMD1YGR074W NTF2P33331 125 aaKnown RBP1.48□□□□□ -2.17
SMD1YGR074W ERG28P40030 148 aa1.48□□□□□ -2.17
SMD1YGR074W YNL194CP40169 301 aa1.48□□□□□ -2.17
SMD1YGR074W ARC15P40518 154 aaRIP-Chip data1.48□□□□□ -2.17not detected
SMD1YGR074W CAT5P41735 233 aa1.48□□□□□ -2.17
SMD1YGR074W OST2P46964 130 aa1.48□□□□□ -2.17
SMD1YGR074W GON7P46984 123 aa1.48□□□□□ -2.17
SMD1YGR074W YGR026WP53217 278 aa1.48□□□□□ -2.17
SMD1YGR074W GTR2P53290 341 aa1.48□□□□□ -2.17
SMD1YGR074W YNL046WP53956 172 aa1.48□□□□□ -2.17
SMD1YGR074W ABF2Q02486 183 aa1.48□□□□□ -2.17
SMD1YGR074W MRPS17Q03246 237 aaPredicted RBP1.48□□□□□ -2.17
SMD1YGR074W FCF1Q05498 189 aaPredicted RBP1.48□□□□□ -2.17
SMD1YGR074W INM2Q05533 292 aa1.48□□□□□ -2.17
SMD1YGR074W YPR172WQ06608 200 aa1.48□□□□□ -2.17
SMD1YGR074W DCN1Q12395 269 aa1.48□□□□□ -2.17
SMD1YGR074W EMP46Q12396 444 aa1.48□□□□□ -2.17
SMD1YGR074W ADF1Q2V2Q1 113 aa1.48□□□□□ -2.17
SMD1YGR074W LSO2Q3E772 92 aaKnown RBP1.48□□□□□ -2.17
SMD1YGR074W SAS5Q99314 248 aa1.48□□□□□ -2.17
SMD1YGR074W ARG80P07249 177 aa1.47□□□□□ -2.17
SMD1YGR074W CDC33P07260 213 aaKnown RBP1.47□□□□□ -2.17
SMD1YGR074W KRE1P17260 313 aa1.47□□□□□ -2.17
SMD1YGR074W ERD2P18414 219 aa1.47□□□□□ -2.17
SMD1YGR074W VMA11P32842 164 aa1.47□□□□□ -2.17
SMD1YGR074W YPT52P36018 234 aaKnown RBP1.47□□□□□ -2.17
SMD1YGR074W MSA2P36157 363 aa1.47□□□□□ -2.17
SMD1YGR074W YAR068WP39564 161 aa1.47□□□□□ -2.17
SMD1YGR074W YER188WP40103 239 aa1.47□□□□□ -2.17
SMD1YGR074W RFC4P40339 323 aaKnown RBP1.47□□□□□ -2.17
SMD1YGR074W YJL144WP47009 104 aa1.47□□□□□ -2.17
SMD1YGR074W ADO1P47143 340 aaKnown RBP1.47□□□□□ -2.17
SMD1YGR074W BXI1P48558 297 aa1.47□□□□□ -2.17
SMD1YGR074W BRR6P53062 197 aa1.47□□□□□ -2.17
SMD1YGR074W YGL159WP53110 370 aa1.47□□□□□ -2.17
SMD1YGR074W ALG13P53178 202 aa1.47□□□□□ -2.17
SMD1YGR074W YGL034CP53186 121 aa1.47□□□□□ -2.17
SMD1YGR074W GIM3P53900 129 aa1.47□□□□□ -2.17
SMD1YGR074W YMR279CQ03263 540 aa1.47□□□□□ -2.17
SMD1YGR074W YLR030WQ07967 263 aa1.47□□□□□ -2.17
SMD1YGR074W GET4Q12125 312 aa1.47□□□□□ -2.17
SMD1YGR074W TPO4Q12256 659 aa1.47□□□□□ -2.17
SMD1YGR074W NOT5Q12514 560 aaPredicted RBP1.47□□□□□ -2.17
SMD1YGR074W YKL183C-AQ3E765 70 aa1.47□□□□□ -2.17
SMD1YGR074W MATALPHA2P0CY08 210 aa1.46□□□□□ -2.18
SMD1YGR074W HMLALPHA2P0CY09 210 aa1.46□□□□□ -2.18
SMD1YGR074W CBF1P17106 351 aa1.46□□□□□ -2.18
SMD1YGR074W MGM101P32787 269 aaKnown RBP1.46□□□□□ -2.18
SMD1YGR074W URA8P38627 578 aaPredicted RBP1.46□□□□□ -2.18
SMD1YGR074W RTC3P38804 111 aaPredicted RBP1.46□□□□□ -2.18
SMD1YGR074W SPO73P40031 143 aa1.46□□□□□ -2.18
SMD1YGR074W YER084WP40057 128 aa1.46□□□□□ -2.18
SMD1YGR074W PIR5P46999 287 aa1.46□□□□□ -2.18
SMD1YGR074W IRC18P47056 224 aa1.46□□□□□ -2.18
SMD1YGR074W YJL016WP47072 561 aa1.46□□□□□ -2.18
SMD1YGR074W YJR149WP47177 404 aa1.46□□□□□ -2.18
SMD1YGR074W PRM8P53174 237 aa1.46□□□□□ -2.18
SMD1YGR074W CUS2P53830 285 aaPredicted RBP1.46□□□□□ -2.18
SMD1YGR074W PEX12Q04370 399 aa1.46□□□□□ -2.18
SMD1YGR074W ATG39Q06159 398 aa1.46□□□□□ -2.18
SMD1YGR074W CDD1Q06549 142 aa1.46□□□□□ -2.18
SMD1YGR074W AGC1Q12482 902 aa1.46□□□□□ -2.18
SMD1YGR074W MHT1Q12525 324 aa1.46□□□□□ -2.18
SMD1YGR074W YIL177CP40434 1758 aa1.46□□□□□ -2.18
SMD1YGR074W YJL225CP40889 1758 aa1.46□□□□□ -2.18
SMD1YGR074W CDC28P00546 298 aaKnown RBP1.45□□□□□ -2.18
SMD1YGR074W HTB1P02293 131 aaKnown RBP1.45□□□□□ -2.18
SMD1YGR074W HTB2P02294 131 aa1.45□□□□□ -2.18
SMD1YGR074W SGA1P08019 549 aa1.45□□□□□ -2.18
SMD1YGR074W RPL27AP0C2H6 136 aaKnown RBP1.45□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 153.3 ms