RNA–Protein interactions for RNA: YDR240C

SNU56, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU56, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU56YDR240C SNA3P14359 133 aa1.05□□□□□ -2.24
SNU56YDR240C GRX2P17695 143 aaKnown RBP1.05□□□□□ -2.24
SNU56YDR240C QRI5P32344 111 aa1.05□□□□□ -2.24
SNU56YDR240C FIS1P40515 155 aa1.05□□□□□ -2.24
SNU56YDR240C YIL001WP40560 513 aa1.05□□□□□ -2.24
SNU56YDR240C OST6Q03723 332 aa1.05□□□□□ -2.24
SNU56YDR240C ARR2Q06597 130 aa1.05□□□□□ -2.24
SNU56YDR240C UPS2P35200 230 aa1.05□□□□□ -2.24
SNU56YDR240C PRS2P38620 318 aaKnown RBP1.05□□□□□ -2.24
SNU56YDR240C AGE2P40529 298 aa1.05□□□□□ -2.24
SNU56YDR240C YPR172WQ06608 200 aa1.05□□□□□ -2.24
SNU56YDR240C COQ10Q08058 207 aa1.05□□□□□ -2.24
SNU56YDR240C RRS1Q08746 203 aaKnown RBP1.05□□□□□ -2.24
SNU56YDR240C MRX3P38172 270 aa1.04□□□□□ -2.24
SNU56YDR240C YHR180WP38868 163 aa1.04□□□□□ -2.24
SNU56YDR240C PET100P38958 111 aa1.04□□□□□ -2.24
SNU56YDR240C YJR056CP47115 236 aa1.04□□□□□ -2.24
SNU56YDR240C TOS8P53147 276 aa1.04□□□□□ -2.24
SNU56YDR240C ALG11P53954 548 aaKnown RBP1.04□□□□□ -2.24
SNU56YDR240C SML1Q04964 104 aa1.04□□□□□ -2.24
SNU56YDR240C YOR186WQ08560 144 aa1.04□□□□□ -2.24
SNU56YDR240C YPL257WQ08974 193 aa1.04□□□□□ -2.24
SNU56YDR240C TPO4Q12256 659 aa1.04□□□□□ -2.24
SNU56YDR240C COX2P00410 251 aa1.03□□□□□ -2.24
SNU56YDR240C EHD3P28817 500 aa1.03□□□□□ -2.24
SNU56YDR240C MRPL39P36533 70 aa1.03□□□□□ -2.24
SNU56YDR240C SNZ3P43545 298 aa1.03□□□□□ -2.24
SNU56YDR240C SPG4Q04438 115 aa1.03□□□□□ -2.24
SNU56YDR240C HEM25Q07534 307 aa1.03□□□□□ -2.24
SNU56YDR240C PET9P18239 318 aaKnown RBP1.02□□□□□ -2.25
SNU56YDR240C YPT52P36018 234 aaKnown RBP1.02□□□□□ -2.25
SNU56YDR240C RSM25P40496 264 aa1.02□□□□□ -2.25
SNU56YDR240C JHD2P47156 728 aaPredicted RBP1.02□□□□□ -2.25
SNU56YDR240C RPL24AP04449 155 aaKnown RBP1.01□□□□□ -2.25
SNU56YDR240C MRP1P10662 321 aaKnown RBP1.01□□□□□ -2.25
SNU56YDR240C HOM6P31116 359 aaKnown RBP1.01□□□□□ -2.25
SNU56YDR240C JEN1P36035 616 aa1.01□□□□□ -2.25
SNU56YDR240C SMB1P40018 196 aaKnown RBP1.01□□□□□ -2.25
SNU56YDR240C ERV29P53337 310 aa1.01□□□□□ -2.25
SNU56YDR240C ADH6Q04894 360 aaKnown RBP1.01□□□□□ -2.25
SNU56YDR240C YPR098CQ06089 161 aa1.01□□□□□ -2.25
SNU56YDR240C ATG39Q06159 398 aa1.01□□□□□ -2.25
SNU56YDR240C GPA2P10823 449 aa1□□□□□ -2.25
SNU56YDR240C GOS1P38736 223 aa1□□□□□ -2.25
SNU56YDR240C YAR1P46683 200 aa1□□□□□ -2.25
SNU56YDR240C NUP57P48837 541 aa1□□□□□ -2.25
SNU56YDR240C HTL1Q9URQ5 78 aa1□□□□□ -2.25
SNU56YDR240C FLO9P39712 1322 aa1□□□□□ -2.25
SNU56YDR240C SGE1P33335 543 aa0.99□□□□□ -2.25
SNU56YDR240C TCD1P38756 429 aa0.99□□□□□ -2.25
SNU56YDR240C YAR068WP39564 161 aa0.99□□□□□ -2.25
SNU56YDR240C HAM1P47119 197 aaKnown RBP0.99□□□□□ -2.25
SNU56YDR240C ERV25P54837 211 aaKnown RBP0.99□□□□□ -2.25
SNU56YDR240C YCT1Q12235 531 aa0.99□□□□□ -2.25
SNU56YDR240C IPP1P00817 287 aaKnown RBP0.99□□□□□ -2.25
SNU56YDR240C CPA1P07258 411 aaKnown RBP0.99□□□□□ -2.25
SNU56YDR240C RSR1P13856 272 aa0.99□□□□□ -2.25
SNU56YDR240C DAL82P21705 255 aa0.99□□□□□ -2.25
SNU56YDR240C MEI4P29467 408 aa0.99□□□□□ -2.25
SNU56YDR240C RPF1P38805 295 aaKnown RBP0.99□□□□□ -2.25
SNU56YDR240C RPL33BP41056 107 aaKnown RBP0.99□□□□□ -2.25
SNU56YDR240C EMC2P47133 292 aaKnown RBP0.99□□□□□ -2.25
SNU56YDR240C SNZ2P53824 298 aa0.99□□□□□ -2.25
SNU56YDR240C YNL046WP53956 172 aa0.99□□□□□ -2.25
SNU56YDR240C YOR020W-AQ3E824 90 aa0.99□□□□□ -2.25
SNU56YDR240C RPA43P46669 326 aa0.98□□□□□ -2.25
SNU56YDR240C USE1P53146 245 aa0.98□□□□□ -2.25
SNU56YDR240C YDR209CQ03480 137 aa0.98□□□□□ -2.25
SNU56YDR240C ACC1Q00955 2233 aaKnown RBP0.98□□□□□ -2.25
SNU56YDR240C VAR1P02381 398 aa0.97□□□□□ -2.25
SNU56YDR240C RNA15P25299 296 aaPredicted RBP0.97□□□□□ -2.25
SNU56YDR240C YBR096WP38256 230 aa0.97□□□□□ -2.25
SNU56YDR240C ICE2P40499 491 aa0.97□□□□□ -2.25
SNU56YDR240C TIR3P40552 269 aa0.97□□□□□ -2.25
SNU56YDR240C COX20Q04935 205 aa0.97□□□□□ -2.25
SNU56YDR240C SLH1P53327 1967 aaKnown RBP0.96□□□□□ -2.26
SNU56YDR240C TMA19P35691 167 aaKnown RBP0.96□□□□□ -2.26
SNU56YDR240C ECM33P38248 429 aaKnown RBP0.96□□□□□ -2.26
SNU56YDR240C CSM4Q08955 156 aa0.96□□□□□ -2.26
SNU56YDR240C NIP7Q08962 181 aaKnown RBP0.96□□□□□ -2.26
SNU56YDR240C ERD2P18414 219 aa0.95□□□□□ -2.26
SNU56YDR240C RRF1P38771 230 aa0.95□□□□□ -2.26
SNU56YDR240C GLG2P47011 380 aa0.95□□□□□ -2.26
SNU56YDR240C ILM1P47155 203 aa0.95□□□□□ -2.26
SNU56YDR240C YPL162CQ12042 273 aa0.95□□□□□ -2.26
SNU56YDR240C SNU23Q12368 194 aaPredicted RBP0.95□□□□□ -2.26
SNU56YDR240C BOL2P53082 120 aa0.94□□□□□ -2.26
SNU56YDR240C MPA43P53583 542 aaPredicted RBP0.94□□□□□ -2.26
SNU56YDR240C RHO3Q00245 231 aaKnown RBP0.94□□□□□ -2.26
SNU56YDR240C CDC8P00572 216 aa0.93□□□□□ -2.26
SNU56YDR240C POL30P15873 258 aaKnown RBP0.93□□□□□ -2.26
SNU56YDR240C FZF1P32805 299 aa0.93□□□□□ -2.26
SNU56YDR240C YHR127WP38833 243 aaKnown RBP0.93□□□□□ -2.26
SNU56YDR240C BFR1P38934 470 aaKnown RBP RIP-Chip data0.93□□□□□ -2.26not detected
SNU56YDR240C PGD1P40356 397 aa0.93□□□□□ -2.26
SNU56YDR240C GPI8P49018 411 aa0.93□□□□□ -2.26
SNU56YDR240C SEI1Q06058 285 aa0.93□□□□□ -2.26
SNU56YDR240C FCY2P17064 533 aa0.92□□□□□ -2.26
SNU56YDR240C KDX1P36005 433 aa0.92□□□□□ -2.26
SNU56YDR240C YBR063CP38083 404 aa0.92□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 104.7 ms