RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W TPN1P53099 579 aa5.01□□□□□ -1.61
VMS1YDR049W ELP3Q02908 557 aaKnown RBP5.01□□□□□ -1.61
VMS1YDR049W PLP1Q04004 230 aa5.01□□□□□ -1.61
VMS1YDR049W YPR202WQ08993 238 aa5.01□□□□□ -1.61
VMS1YDR049W MDM32Q12171 622 aa5.01□□□□□ -1.61
VMS1YDR049W RFM1Q12192 310 aa5.01□□□□□ -1.61
VMS1YDR049W TIR2P33890 251 aa5□□□□□ -1.61
VMS1YDR049W KTI12P34253 313 aaKnown RBP5□□□□□ -1.61
VMS1YDR049W RFC2P40348 353 aa5□□□□□ -1.61
VMS1YDR049W TES1P41903 349 aaKnown RBP5□□□□□ -1.61
VMS1YDR049W PRM8P53174 237 aa5□□□□□ -1.61
VMS1YDR049W YGL039WP53183 348 aaKnown RBP5□□□□□ -1.61
VMS1YDR049W BOR1P53838 576 aa5□□□□□ -1.61
VMS1YDR049W MRX11Q03079 207 aa5□□□□□ -1.61
VMS1YDR049W YMR206WQ03695 313 aa5□□□□□ -1.61
VMS1YDR049W YMR027WQ04371 470 aa5□□□□□ -1.61
VMS1YDR049W YOR214CQ12282 236 aa5□□□□□ -1.61
VMS1YDR049W ATP14Q12349 124 aa5□□□□□ -1.61
VMS1YDR049W CYC3P06182 269 aa5□□□□□ -1.61
VMS1YDR049W COQ3P27680 312 aa5□□□□□ -1.61
VMS1YDR049W LHP1P33399 275 aaKnown RBP5□□□□□ -1.61
VMS1YDR049W SFK1P35735 353 aa5□□□□□ -1.61
VMS1YDR049W PCL5P38794 229 aa5□□□□□ -1.61
VMS1YDR049W YIL169CP40442 995 aa5□□□□□ -1.61
VMS1YDR049W SER33P40510 469 aa5□□□□□ -1.61
VMS1YDR049W YFL015CP43578 164 aa5□□□□□ -1.61
VMS1YDR049W YJR015WP47090 510 aa5□□□□□ -1.61
VMS1YDR049W UBC12P52491 188 aa5□□□□□ -1.61
VMS1YDR049W NRD1P53617 575 aaKnown RBP RIP-Chip data5□□□□□ -1.61not detected
VMS1YDR049W YNR048WP53740 393 aa5□□□□□ -1.61
VMS1YDR049W TSA2Q04120 196 aa5□□□□□ -1.61
VMS1YDR049W RPL25P04456 142 aaKnown RBP4.99□□□□□ -1.61
VMS1YDR049W YCR007CP25354 239 aa4.99□□□□□ -1.61
VMS1YDR049W SNC1P31109 117 aa4.99□□□□□ -1.61
VMS1YDR049W VMA7P39111 118 aa4.99□□□□□ -1.61
VMS1YDR049W RIO2P40160 425 aaKnown RBP4.99□□□□□ -1.61
VMS1YDR049W MEP2P41948 499 aa4.99□□□□□ -1.61
VMS1YDR049W ERJ5P43613 295 aaPredicted RBP4.99□□□□□ -1.61
VMS1YDR049W BIR1P47134 954 aa4.99□□□□□ -1.61
VMS1YDR049W YGR017WP53210 297 aa4.99□□□□□ -1.61
VMS1YDR049W ACT1P60010 375 aaKnown RBP4.99□□□□□ -1.61
VMS1YDR049W RSC9Q03124 581 aa4.99□□□□□ -1.61
VMS1YDR049W FMN1Q03778 218 aa4.99□□□□□ -1.61
VMS1YDR049W UTP15Q04305 513 aaKnown RBP4.99□□□□□ -1.61
VMS1YDR049W SUE1Q06524 206 aa4.99□□□□□ -1.61
VMS1YDR049W HRD1Q08109 551 aa4.99□□□□□ -1.61
VMS1YDR049W MCT1Q12283 360 aa4.99□□□□□ -1.61
VMS1YDR049W LAS17Q12446 633 aa4.99□□□□□ -1.61
VMS1YDR049W DNF2Q12675 1612 aa4.99□□□□□ -1.61
VMS1YDR049W CAP2P13517 287 aa4.98□□□□□ -1.61
VMS1YDR049W PET9P18239 318 aaKnown RBP4.98□□□□□ -1.61
VMS1YDR049W RSA4P25382 515 aaKnown RBP4.98□□□□□ -1.61
VMS1YDR049W ALK2P32789 676 aaPredicted RBP4.98□□□□□ -1.61
VMS1YDR049W DOG2P38773 246 aa4.98□□□□□ -1.61
VMS1YDR049W DOG1P38774 246 aa4.98□□□□□ -1.61
VMS1YDR049W EXO1P39875 702 aa4.98□□□□□ -1.61
VMS1YDR049W HAC1P41546 238 aa4.98□□□□□ -1.61
VMS1YDR049W UFD1P53044 361 aa4.98□□□□□ -1.61
VMS1YDR049W YNL184CP53876 108 aa4.98□□□□□ -1.61
VMS1YDR049W APS2Q00381 147 aa4.98□□□□□ -1.61
VMS1YDR049W YMR320WQ04897 101 aa4.98□□□□□ -1.61
VMS1YDR049W TAF9Q05027 157 aa4.98□□□□□ -1.61
VMS1YDR049W NKP2Q06162 153 aa4.98□□□□□ -1.61
VMS1YDR049W PEX30Q06169 523 aa4.98□□□□□ -1.61
VMS1YDR049W ZEO1Q08245 113 aa4.98□□□□□ -1.61
VMS1YDR049W ATP16Q12165 160 aa4.98□□□□□ -1.61
VMS1YDR049W PSF1Q12488 208 aa4.98□□□□□ -1.61
VMS1YDR049W YPR053CQ6Q5F3 151 aa4.98□□□□□ -1.61
VMS1YDR049W IQG1Q12280 1495 aa4.98□□□□□ -1.61
VMS1YDR049W YAL064W-BO13512 126 aa4.98□□□□□ -1.61
VMS1YDR049W CBP6P07253 162 aaPredicted RBP4.98□□□□□ -1.61
VMS1YDR049W ALG7P07286 448 aa4.98□□□□□ -1.61
VMS1YDR049W PBI2P0CT04 75 aaKnown RBP4.98□□□□□ -1.61
VMS1YDR049W SEC14P24280 304 aaKnown RBP4.98□□□□□ -1.61
VMS1YDR049W YGP1P38616 354 aaKnown RBP4.98□□□□□ -1.61
VMS1YDR049W PEX22P39718 180 aa4.98□□□□□ -1.61
VMS1YDR049W YNL320WP42840 284 aa4.98□□□□□ -1.61
VMS1YDR049W PAC10P48363 199 aa4.98□□□□□ -1.61
VMS1YDR049W SCS7Q03529 384 aa4.98□□□□□ -1.61
VMS1YDR049W YET2Q04210 160 aa4.98□□□□□ -1.61
VMS1YDR049W SPG4Q04438 115 aa4.98□□□□□ -1.61
VMS1YDR049W YDR124WQ04608 324 aa4.98□□□□□ -1.61
VMS1YDR049W YMR317WQ04893 1140 aa4.98□□□□□ -1.61
VMS1YDR049W YSP2Q06681 1438 aa4.98□□□□□ -1.61
VMS1YDR049W YOR093CQ12275 1648 aa4.97□□□□□ -1.61
VMS1YDR049W SPS100P13130 326 aa4.97□□□□□ -1.61
VMS1YDR049W MDM10P18409 493 aa4.97□□□□□ -1.61
VMS1YDR049W HCM1P25364 564 aa4.97□□□□□ -1.61
VMS1YDR049W YCR090CP25654 182 aaKnown RBP4.97□□□□□ -1.61
VMS1YDR049W PDC2P32896 925 aa4.97□□□□□ -1.61
VMS1YDR049W SCO2P38072 301 aa4.97□□□□□ -1.61
VMS1YDR049W TRR2P38816 342 aa4.97□□□□□ -1.61
VMS1YDR049W SPL2P38839 148 aa4.97□□□□□ -1.61
VMS1YDR049W ERV46P39727 415 aa4.97□□□□□ -1.61
VMS1YDR049W AVT4P50944 713 aa4.97□□□□□ -1.61
VMS1YDR049W GPI17Q04080 534 aa4.97□□□□□ -1.61
VMS1YDR049W FAR10Q06001 478 aa4.97□□□□□ -1.61
VMS1YDR049W DIC1Q06143 298 aa4.97□□□□□ -1.61
VMS1YDR049W YOL073CQ08232 322 aa4.97□□□□□ -1.61
VMS1YDR049W YKR104WP0CE69 306 aa4.96□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms