RNA–Protein interactions for RNA: YDL088C

ASM4, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene ASM4, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ASM4YDL088C BRR6P53062 197 aa1.35□□□□□ -2.19
ASM4YDL088C SSU72P53538 206 aaPredicted RBP1.35□□□□□ -2.19
ASM4YDL088C YML108WQ03759 105 aa1.35□□□□□ -2.19
ASM4YDL088C YDR124WQ04608 324 aa1.35□□□□□ -2.19
ASM4YDL088C YET3Q07451 203 aa1.35□□□□□ -2.19
ASM4YDL088C HEM25Q07534 307 aa1.35□□□□□ -2.19
ASM4YDL088C YRA1Q12159 226 aaKnown RBP1.35□□□□□ -2.19
ASM4YDL088C RPL28P02406 149 aaKnown RBP1.34□□□□□ -2.19
ASM4YDL088C SNA3P14359 133 aa1.34□□□□□ -2.19
ASM4YDL088C PHO80P20052 293 aa1.34□□□□□ -2.19
ASM4YDL088C RFA3P26755 122 aaKnown RBP1.34□□□□□ -2.19
ASM4YDL088C EHD3P28817 500 aa1.34□□□□□ -2.19
ASM4YDL088C BMH1P29311 267 aaKnown RBP1.34□□□□□ -2.19
ASM4YDL088C CLB6P32943 380 aa1.34□□□□□ -2.19
ASM4YDL088C VPS51P36116 164 aa1.34□□□□□ -2.19
ASM4YDL088C MRPL39P36533 70 aa1.34□□□□□ -2.19
ASM4YDL088C PHO89P38361 574 aa1.34□□□□□ -2.19
ASM4YDL088C YHL049CP38722 271 aa1.34□□□□□ -2.19
ASM4YDL088C YHL044WP38727 235 aa1.34□□□□□ -2.19
ASM4YDL088C TRM5P38793 499 aa1.34□□□□□ -2.19
ASM4YDL088C YHR127WP38833 243 aaKnown RBP1.34□□□□□ -2.19
ASM4YDL088C SUR2P38992 349 aa1.34□□□□□ -2.19
ASM4YDL088C YMR144WP40214 342 aaKnown RBP1.34□□□□□ -2.19
ASM4YDL088C EFM5P53200 248 aaKnown RBP1.34□□□□□ -2.19
ASM4YDL088C RSM27P53305 110 aa1.34□□□□□ -2.19
ASM4YDL088C ALG9P53868 555 aaKnown RBP1.34□□□□□ -2.19
ASM4YDL088C GOT1Q03554 138 aa1.34□□□□□ -2.19
ASM4YDL088C YPL278CQ08990 100 aa1.34□□□□□ -2.19
ASM4YDL088C TPO4Q12256 659 aa1.34□□□□□ -2.19
ASM4YDL088C YLR126CQ12288 251 aa1.34□□□□□ -2.19
ASM4YDL088C SMT3Q12306 101 aaKnown RBP1.34□□□□□ -2.19
ASM4YDL088C RAD9P14737 1309 aa1.34□□□□□ -2.19
ASM4YDL088C YDR157WA0A023PZE8 133 aa1.34□□□□□ -2.2
ASM4YDL088C QCR7P00128 127 aa1.34□□□□□ -2.2
ASM4YDL088C CBF1P17106 351 aa1.34□□□□□ -2.2
ASM4YDL088C CSG2P35206 410 aa1.34□□□□□ -2.2
ASM4YDL088C YCR087C-AP37263 153 aa1.34□□□□□ -2.2
ASM4YDL088C HMT1P38074 348 aa1.34□□□□□ -2.2
ASM4YDL088C TEM1P38987 245 aa1.34□□□□□ -2.2
ASM4YDL088C AVT7P40501 490 aa1.34□□□□□ -2.2
ASM4YDL088C SNZ3P43545 298 aa1.34□□□□□ -2.2
ASM4YDL088C ILM1P47155 203 aa1.34□□□□□ -2.2
ASM4YDL088C NUP57P48837 541 aa1.34□□□□□ -2.2
ASM4YDL088C RMR1P53060 241 aa1.34□□□□□ -2.2
ASM4YDL088C NIF3P53081 288 aa1.34□□□□□ -2.2
ASM4YDL088C NOP19P53317 196 aaPredicted RBP1.34□□□□□ -2.2
ASM4YDL088C FMP41P53889 259 aaKnown RBP1.34□□□□□ -2.2
ASM4YDL088C FYV6P53913 173 aa1.34□□□□□ -2.2
ASM4YDL088C DID2P69771 204 aa1.34□□□□□ -2.2
ASM4YDL088C MRS2Q01926 470 aa1.34□□□□□ -2.2
ASM4YDL088C YMR279CQ03263 540 aa1.34□□□□□ -2.2
ASM4YDL088C GIM5Q04493 163 aa1.34□□□□□ -2.2
ASM4YDL088C YOR186WQ08560 144 aa1.34□□□□□ -2.2
ASM4YDL088C YAL063C-AQ3E791 96 aa1.34□□□□□ -2.2
ASM4YDL088C TUS1Q06412 1307 aa1.33□□□□□ -2.2
ASM4YDL088C RPL35AP0CX84 120 aaKnown RBP1.33□□□□□ -2.2
ASM4YDL088C RPL35BP0CX85 120 aaKnown RBP1.33□□□□□ -2.2
ASM4YDL088C URA6P15700 204 aa1.33□□□□□ -2.2
ASM4YDL088C ERD2P18414 219 aa1.33□□□□□ -2.2
ASM4YDL088C YCR025CP25352 136 aa1.33□□□□□ -2.2
ASM4YDL088C SEC72P39742 193 aaKnown RBP1.33□□□□□ -2.2
ASM4YDL088C YIL012WP40551 113 aa1.33□□□□□ -2.2
ASM4YDL088C OST3P48439 350 aa1.33□□□□□ -2.2
ASM4YDL088C TRM9P49957 279 aa1.33□□□□□ -2.2
ASM4YDL088C TOS8P53147 276 aa1.33□□□□□ -2.2
ASM4YDL088C PRM8P53174 237 aa1.33□□□□□ -2.2
ASM4YDL088C SNZ2P53824 298 aa1.33□□□□□ -2.2
ASM4YDL088C OSH6Q02201 448 aa1.33□□□□□ -2.2
ASM4YDL088C FAR8Q05040 523 aa1.33□□□□□ -2.2
ASM4YDL088C GPM2Q12008 311 aa1.33□□□□□ -2.2
ASM4YDL088C PRR2Q12310 699 aa1.33□□□□□ -2.2
ASM4YDL088C LSO2Q3E772 92 aaKnown RBP1.33□□□□□ -2.2
ASM4YDL088C YCL012CQ8J0M4 134 aa1.33□□□□□ -2.2
ASM4YDL088C SIR4P11978 1358 aa1.32□□□□□ -2.2
ASM4YDL088C DRS2P39524 1355 aa1.32□□□□□ -2.2
ASM4YDL088C COS2P0CX12 379 aa1.32□□□□□ -2.2
ASM4YDL088C COS3P0CX13 379 aa1.32□□□□□ -2.2
ASM4YDL088C APA2P22108 325 aa1.32□□□□□ -2.2
ASM4YDL088C PPH21P23594 369 aa1.32□□□□□ -2.2
ASM4YDL088C CAF4P36130 643 aa1.32□□□□□ -2.2
ASM4YDL088C ECM13P38195 257 aa1.32□□□□□ -2.2
ASM4YDL088C SSH1P38353 490 aaKnown RBP1.32□□□□□ -2.2
ASM4YDL088C PEX17P40155 199 aa1.32□□□□□ -2.2
ASM4YDL088C BMT5P40493 336 aa1.32□□□□□ -2.2
ASM4YDL088C RSM25P40496 264 aa1.32□□□□□ -2.2
ASM4YDL088C RPE1P46969 238 aa1.32□□□□□ -2.2
ASM4YDL088C MMS2P53152 137 aa1.32□□□□□ -2.2
ASM4YDL088C RTC4P53850 401 aa1.32□□□□□ -2.2
ASM4YDL088C SWT21P53873 357 aaPredicted RBP1.32□□□□□ -2.2
ASM4YDL088C YNL046WP53956 172 aa1.32□□□□□ -2.2
ASM4YDL088C TVP15Q03860 143 aa1.32□□□□□ -2.2
ASM4YDL088C NNT1Q05874 261 aa1.32□□□□□ -2.2
ASM4YDL088C SMD2Q06217 110 aaKnown RBP1.32□□□□□ -2.2
ASM4YDL088C YNG1Q08465 219 aa1.32□□□□□ -2.2
ASM4YDL088C YEL009C-AA0A023PZF2 135 aa1.31□□□□□ -2.2
ASM4YDL088C ZWF1P11412 505 aaKnown RBP1.31□□□□□ -2.2
ASM4YDL088C FBA1P14540 359 aaKnown RBP1.31□□□□□ -2.2
ASM4YDL088C SFC1P33303 322 aa1.31□□□□□ -2.2
ASM4YDL088C APS1P35181 156 aa1.31□□□□□ -2.2
ASM4YDL088C YPT52P36018 234 aaKnown RBP1.31□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms