RNA–Protein interactions for RNA: YCL014W

BUD3, Transcript of Protein involved in bud-site selection, yeast

Gene BUD3, Length 4,911 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BUD3	YCL014W	YLR161W	P0CE98	114 aa		0.88	□□□□□ -2.27
BUD3	YCL014W	YLR157W-D	P0CE99	70 aa		0.88	□□□□□ -2.27
BUD3	YCL014W	RPL20A	P0CX23	172 aa	Known RBP	0.88	□□□□□ -2.27
BUD3	YCL014W	RPL20B	P0CX24	172 aa	Predicted RBP	0.88	□□□□□ -2.27
BUD3	YCL014W	UBC1	P21734	215 aa	Known RBP	0.88	□□□□□ -2.27
BUD3	YCL014W	SEC17	P32602	292 aa		0.88	□□□□□ -2.27
BUD3	YCL014W	NFU1	P32860	256 aa		0.88	□□□□□ -2.27
BUD3	YCL014W	AST1	P35183	429 aa		0.88	□□□□□ -2.27
BUD3	YCL014W	MCR1	P36060	302 aa	Known RBP	0.88	□□□□□ -2.27
BUD3	YCL014W	OPY1	P38271	328 aa		0.88	□□□□□ -2.27
BUD3	YCL014W	DER1	P38307	211 aa		0.88	□□□□□ -2.27
BUD3	YCL014W	RPS12	P48589	143 aa	Known RBP	0.88	□□□□□ -2.27
BUD3	YCL014W	YGL159W	P53110	370 aa		0.88	□□□□□ -2.27
BUD3	YCL014W	YNL143C	P53908	130 aa		0.88	□□□□□ -2.27
BUD3	YCL014W	YML119W	Q03208	357 aa		0.88	□□□□□ -2.27
BUD3	YCL014W	GTO3	Q04806	366 aa		0.88	□□□□□ -2.27
BUD3	YCL014W	ROY1	Q04847	553 aa		0.88	□□□□□ -2.27
BUD3	YCL014W	MDM36	Q06820	579 aa		0.88	□□□□□ -2.27
BUD3	YCL014W	YDL157C	Q12082	118 aa		0.88	□□□□□ -2.27
BUD3	YCL014W	MF(ALPHA)1	P01149	165 aa		0.88	□□□□□ -2.27
BUD3	YCL014W	PUT4	P15380	627 aa		0.88	□□□□□ -2.27
BUD3	YCL014W	NOP1	P15646	327 aa	Known RBP	0.88	□□□□□ -2.27
BUD3	YCL014W	PRI2	P20457	528 aa		0.88	□□□□□ -2.27
BUD3	YCL014W	SAR1	P20606	190 aa	Known RBP	0.88	□□□□□ -2.27
BUD3	YCL014W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	0.88	□□□□□ -2.27	not detected
BUD3	YCL014W	RPT1	P33299	467 aa	Known RBP	0.88	□□□□□ -2.27
BUD3	YCL014W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	0.88	□□□□□ -2.27	not detected
BUD3	YCL014W	YBR285W	P38354	144 aa		0.88	□□□□□ -2.27
BUD3	YCL014W	NVJ1	P38881	321 aa		0.88	□□□□□ -2.27
BUD3	YCL014W	YER184C	P39961	794 aa		0.88	□□□□□ -2.27
BUD3	YCL014W	PAC10	P48363	199 aa		0.88	□□□□□ -2.27
BUD3	YCL014W	TAF4	P50105	388 aa		0.88	□□□□□ -2.27
BUD3	YCL014W	CBK1	P53894	756 aa		0.88	□□□□□ -2.27
BUD3	YCL014W	RPN4	Q03465	531 aa		0.88	□□□□□ -2.27
BUD3	YCL014W	ARO80	Q04052	950 aa		0.88	□□□□□ -2.27
BUD3	YCL014W	SML1	Q04964	104 aa		0.88	□□□□□ -2.27
BUD3	YCL014W	HRI1	Q05905	244 aa	Known RBP	0.88	□□□□□ -2.27
BUD3	YCL014W	FRE8	Q12209	686 aa		0.88	□□□□□ -2.27
BUD3	YCL014W	TIM9	O74700	87 aa		0.87	□□□□□ -2.27
BUD3	YCL014W	PGS1	P25578	521 aa		0.87	□□□□□ -2.27
BUD3	YCL014W	PEX34	P25584	144 aa		0.87	□□□□□ -2.27
BUD3	YCL014W	TOA2	P32774	122 aa		0.87	□□□□□ -2.27
BUD3	YCL014W	SWC5	P38326	303 aa		0.87	□□□□□ -2.27
BUD3	YCL014W	ECM34	P38728	170 aa		0.87	□□□□□ -2.27
BUD3	YCL014W	HTD2	P38790	280 aa	Known RBP	0.87	□□□□□ -2.27
BUD3	YCL014W	ASP1	P38986	381 aa	Predicted RBP	0.87	□□□□□ -2.27
BUD3	YCL014W	BMT5	P40493	336 aa		0.87	□□□□□ -2.27
BUD3	YCL014W	IRC18	P47056	224 aa		0.87	□□□□□ -2.27
BUD3	YCL014W	YNR064C	P53750	290 aa		0.87	□□□□□ -2.27
BUD3	YCL014W	BRX1	Q08235	291 aa	Known RBP	0.87	□□□□□ -2.27
BUD3	YCL014W	FYV12	Q08559	129 aa		0.87	□□□□□ -2.27
BUD3	YCL014W	TCO89	Q08921	799 aa		0.87	□□□□□ -2.27
BUD3	YCL014W	YER145C-A	A0A023PYF4	145 aa		0.87	□□□□□ -2.27
BUD3	YCL014W	PUT1	P09368	476 aa		0.87	□□□□□ -2.27
BUD3	YCL014W	RNR3	P21672	869 aa	Known RBP	0.87	□□□□□ -2.27
BUD3	YCL014W	ASF2	P32448	525 aa	Predicted RBP	0.87	□□□□□ -2.27
BUD3	YCL014W	SMI1	P32566	505 aa		0.87	□□□□□ -2.27
BUD3	YCL014W	SSO1	P32867	290 aa		0.87	□□□□□ -2.27
BUD3	YCL014W	SRB2	P34162	210 aa		0.87	□□□□□ -2.27
BUD3	YCL014W	PTC1	P35182	281 aa		0.87	□□□□□ -2.27
BUD3	YCL014W	CAF4	P36130	643 aa		0.87	□□□□□ -2.27
BUD3	YCL014W	PET100	P38958	111 aa		0.87	□□□□□ -2.27
BUD3	YCL014W	HAT2	P39984	401 aa		0.87	□□□□□ -2.27
BUD3	YCL014W	DLS1	P40366	167 aa		0.87	□□□□□ -2.27
BUD3	YCL014W	YIL108W	P40483	696 aa	Known RBP	0.87	□□□□□ -2.27
BUD3	YCL014W	GLR1	P41921	483 aa	Known RBP	0.87	□□□□□ -2.27
BUD3	YCL014W	SFH5	P47008	294 aa		0.87	□□□□□ -2.27
BUD3	YCL014W	YJR111C	P47148	283 aa	Known RBP	0.87	□□□□□ -2.27
BUD3	YCL014W	MMS2	P53152	137 aa		0.87	□□□□□ -2.27
BUD3	YCL014W	EFM5	P53200	248 aa	Known RBP	0.87	□□□□□ -2.27
BUD3	YCL014W	PBA1	Q05778	276 aa		0.87	□□□□□ -2.27
BUD3	YCL014W	YOR378W	Q08902	515 aa		0.87	□□□□□ -2.27
BUD3	YCL014W	CSM4	Q08955	156 aa		0.87	□□□□□ -2.27
BUD3	YCL014W	AHA1	Q12449	350 aa	Known RBP	0.87	□□□□□ -2.27
BUD3	YCL014W	YDR119W-A	Q2V2P9	66 aa		0.87	□□□□□ -2.27
BUD3	YCL014W	RAS2	P01120	322 aa	Known RBP	0.87	□□□□□ -2.27
BUD3	YCL014W	AQY1	P0CD91	305 aa		0.87	□□□□□ -2.27
BUD3	YCL014W	TAL1	P15019	335 aa	Known RBP	0.87	□□□□□ -2.27
BUD3	YCL014W	UBC8	P28263	218 aa		0.87	□□□□□ -2.27
BUD3	YCL014W	ANR2	P36090	516 aa	Predicted RBP	0.87	□□□□□ -2.27
BUD3	YCL014W	UTP30	P36144	274 aa	Known RBP	0.87	□□□□□ -2.27
BUD3	YCL014W	PET8	P38921	284 aa		0.87	□□□□□ -2.27
BUD3	YCL014W	YER084W	P40057	128 aa		0.87	□□□□□ -2.27
BUD3	YCL014W	OST1	P41543	476 aa	Known RBP	0.87	□□□□□ -2.27
BUD3	YCL014W	THG1	P53215	237 aa	Known RBP	0.87	□□□□□ -2.27
BUD3	YCL014W	YNL193W	P53870	558 aa		0.87	□□□□□ -2.27
BUD3	YCL014W	YNL033W	P53964	284 aa		0.87	□□□□□ -2.27
BUD3	YCL014W	GIP3	Q03016	1276 aa		0.87	□□□□□ -2.27
BUD3	YCL014W	MIX17	Q03667	156 aa		0.87	□□□□□ -2.27
BUD3	YCL014W	TSC3	Q3E790	80 aa		0.87	□□□□□ -2.27
BUD3	YCL014W	YAK1	P14680	807 aa		0.86	□□□□□ -2.27
BUD3	YCL014W	IDP1	P21954	428 aa	Known RBP	0.86	□□□□□ -2.27
BUD3	YCL014W	RAD51	P25454	400 aa		0.86	□□□□□ -2.27
BUD3	YCL014W	RPC19	P28000	142 aa	Known RBP	0.86	□□□□□ -2.27
BUD3	YCL014W	FAA1	P30624	700 aa	Known RBP	0.86	□□□□□ -2.27
BUD3	YCL014W	HEL1	P36113	551 aa		0.86	□□□□□ -2.27
BUD3	YCL014W	MED6	P38782	295 aa		0.86	□□□□□ -2.27
BUD3	YCL014W	YHR122W	P38829	231 aa		0.86	□□□□□ -2.27
BUD3	YCL014W	NDT80	P38830	627 aa		0.86	□□□□□ -2.27
BUD3	YCL014W	LYS1	P38998	373 aa	RIP-Chip data	0.86	□□□□□ -2.27	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms