RNA–Protein interactions for RNA: YBR223C

TDP1, Transcript of Tyrosyl-DNA phosphodiesterase I, yeastyeast

Gene TDP1, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDP1YBR223C RPL13BP40212 199 aaKnown RBP6.07□□□□□ -1.44
TDP1YBR223C YIL024CP40543 189 aa6.07□□□□□ -1.44
TDP1YBR223C GNA1P43577 159 aaPredicted RBP6.07□□□□□ -1.44
TDP1YBR223C TY1A-JR2P47099 440 aa6.07□□□□□ -1.44
TDP1YBR223C AVT4P50944 713 aa6.07□□□□□ -1.44
TDP1YBR223C YVH1Q02256 364 aaKnown RBP6.07□□□□□ -1.44
TDP1YBR223C SRP1Q02821 542 aaKnown RBP6.07□□□□□ -1.44
TDP1YBR223C HAS1Q03532 505 aaKnown RBP6.07□□□□□ -1.44
TDP1YBR223C TY1A-DR1Q03856 440 aa6.07□□□□□ -1.44
TDP1YBR223C TY1A-ML1Q04706 440 aaKnown RBP6.07□□□□□ -1.44
TDP1YBR223C TY1A-BRQ12217 440 aa6.07□□□□□ -1.44
TDP1YBR223C YCT1Q12235 531 aa6.07□□□□□ -1.44
TDP1YBR223C MED4Q12343 284 aa6.07□□□□□ -1.44
TDP1YBR223C ISA2Q12425 185 aa6.07□□□□□ -1.44
TDP1YBR223C TY1A-NL2Q12470 440 aa6.07□□□□□ -1.44
TDP1YBR223C TY1A-GR2Q12485 440 aa6.07□□□□□ -1.44
TDP1YBR223C RPL13AQ12690 199 aaPredicted RBP6.07□□□□□ -1.44
TDP1YBR223C Q0142Q9ZZW4 58 aa6.07□□□□□ -1.44
TDP1YBR223C QCR2P07257 368 aa6.07□□□□□ -1.44
TDP1YBR223C PCL1P24867 279 aa6.07□□□□□ -1.44
TDP1YBR223C SHG1P38337 142 aa6.07□□□□□ -1.44
TDP1YBR223C PRS3P38689 320 aaKnown RBP6.07□□□□□ -1.44
TDP1YBR223C QRI1P43123 477 aaKnown RBP6.07□□□□□ -1.44
TDP1YBR223C CTK2P46962 323 aa6.07□□□□□ -1.44
TDP1YBR223C MRX5P47007 382 aa6.07□□□□□ -1.44
TDP1YBR223C SSN8P47821 323 aa6.07□□□□□ -1.44
TDP1YBR223C HHO1P53551 258 aa6.07□□□□□ -1.44
TDP1YBR223C GPI15P53961 229 aa6.07□□□□□ -1.44
TDP1YBR223C YCL001W-AP87012 153 aa6.07□□□□□ -1.44
TDP1YBR223C ERP1Q05359 219 aaKnown RBP6.07□□□□□ -1.44
TDP1YBR223C DXO1Q06349 442 aa6.07□□□□□ -1.44
TDP1YBR223C SDO1Q07953 250 aaKnown RBP6.07□□□□□ -1.44
TDP1YBR223C PRS5Q12265 496 aaKnown RBP6.07□□□□□ -1.44
TDP1YBR223C YMR084WA2P2R3 262 aa6.06□□□□□ -1.44
TDP1YBR223C YML003WP0CF16 290 aa6.06□□□□□ -1.44
TDP1YBR223C YHR214C-DP0CX93 97 aa6.06□□□□□ -1.44
TDP1YBR223C FIG1P38224 298 aa6.06□□□□□ -1.44
TDP1YBR223C GPI16P38875 610 aa6.06□□□□□ -1.44
TDP1YBR223C YEA6P39953 335 aa6.06□□□□□ -1.44
TDP1YBR223C ATF1P40353 525 aa6.06□□□□□ -1.44
TDP1YBR223C PGD1P40356 397 aa6.06□□□□□ -1.44
TDP1YBR223C POG1P40473 351 aa6.06□□□□□ -1.44
TDP1YBR223C REE1P40893 198 aa6.06□□□□□ -1.44
TDP1YBR223C CUP9P41817 306 aa6.06□□□□□ -1.44
TDP1YBR223C MOG1P47123 218 aa6.06□□□□□ -1.44
TDP1YBR223C ADO1P47143 340 aaKnown RBP6.06□□□□□ -1.44
TDP1YBR223C ASK10P48361 1146 aa6.06□□□□□ -1.44
TDP1YBR223C APJ1P53940 528 aa6.06□□□□□ -1.44
TDP1YBR223C THI74Q04083 370 aa6.06□□□□□ -1.44
TDP1YBR223C MRX9Q07349 420 aaKnown RBP6.06□□□□□ -1.44
TDP1YBR223C FAS1P07149 2051 aaKnown RBP6.05□□□□□ -1.44
TDP1YBR223C COX1P00401 534 aa6.05□□□□□ -1.44
TDP1YBR223C PDX1P16451 410 aa6.05□□□□□ -1.44
TDP1YBR223C MIR1P23641 311 aaKnown RBP6.05□□□□□ -1.44
TDP1YBR223C AGA2P32781 87 aa6.05□□□□□ -1.44
TDP1YBR223C IRC24P40580 263 aa6.05□□□□□ -1.44
TDP1YBR223C MOB2P43563 287 aa6.05□□□□□ -1.44
TDP1YBR223C PGU1P47180 361 aa6.05□□□□□ -1.44
TDP1YBR223C YGR026WP53217 278 aa6.05□□□□□ -1.44
TDP1YBR223C RSM23Q01163 450 aa6.05□□□□□ -1.44
TDP1YBR223C VPS28Q02767 242 aa6.05□□□□□ -1.44
TDP1YBR223C SNO1Q03144 224 aa6.05□□□□□ -1.44
TDP1YBR223C CGI121Q03705 181 aaKnown RBP6.05□□□□□ -1.44
TDP1YBR223C GIS1Q03833 894 aa6.05□□□□□ -1.44
TDP1YBR223C YOR376WQ08900 122 aa6.05□□□□□ -1.44
TDP1YBR223C COX5BP00425 151 aa6.04□□□□□ -1.44
TDP1YBR223C YLL053CP0CD98 152 aa6.04□□□□□ -1.44
TDP1YBR223C YBR197CP38306 217 aa6.04□□□□□ -1.44
TDP1YBR223C GPP1P41277 250 aaKnown RBP6.04□□□□□ -1.44
TDP1YBR223C YJR056CP47115 236 aa6.04□□□□□ -1.44
TDP1YBR223C YNR048WP53740 393 aa6.04□□□□□ -1.44
TDP1YBR223C LRS4Q04087 347 aaKnown RBP6.04□□□□□ -1.44
TDP1YBR223C YLR456WQ06199 204 aa6.04□□□□□ -1.44
TDP1YBR223C YIL046W-AQ3E7Z4 54 aa6.04□□□□□ -1.44
TDP1YBR223C GAL1P04385 528 aa6.03□□□□□ -1.44
TDP1YBR223C TY1A-LR4P0C2I8 440 aaKnown RBP6.03□□□□□ -1.44
TDP1YBR223C TY1A-DR6P0CX70 440 aa6.03□□□□□ -1.44
TDP1YBR223C TY1A-ER1P0CX71 440 aa6.03□□□□□ -1.44
TDP1YBR223C TY1A-LR2P0CX72 440 aa6.03□□□□□ -1.44
TDP1YBR223C TY1A-PLP0CX73 440 aa6.03□□□□□ -1.44
TDP1YBR223C TY1A-JR1P0CX74 440 aa6.03□□□□□ -1.44
TDP1YBR223C TY1A-LR3P0CX75 440 aa6.03□□□□□ -1.44
TDP1YBR223C TY1A-ML2P0CX76 440 aa6.03□□□□□ -1.44
TDP1YBR223C RPL30P14120 105 aaKnown RBP6.03□□□□□ -1.44
TDP1YBR223C RIB5P38145 238 aa6.03□□□□□ -1.44
TDP1YBR223C FAT1P38225 669 aa6.03□□□□□ -1.44
TDP1YBR223C YND1P40009 630 aa6.03□□□□□ -1.44
TDP1YBR223C NSA1P53136 463 aaPredicted RBP6.03□□□□□ -1.44
TDP1YBR223C PBP1P53297 722 aaKnown RBP6.03□□□□□ -1.44
TDP1YBR223C MRPS17Q03246 237 aaPredicted RBP6.03□□□□□ -1.44
TDP1YBR223C SDC1Q03323 175 aa6.03□□□□□ -1.44
TDP1YBR223C MIX14Q04341 121 aa6.03□□□□□ -1.44
TDP1YBR223C TY1A-GR1Q12085 440 aa6.03□□□□□ -1.44
TDP1YBR223C TY1A-PR3Q6Q5H1 440 aaKnown RBP6.03□□□□□ -1.44
TDP1YBR223C TY1A-OLQ92392 440 aaKnown RBP6.03□□□□□ -1.44
TDP1YBR223C CKA1P15790 372 aa6.03□□□□□ -1.44
TDP1YBR223C SED4P25365 1065 aa6.03□□□□□ -1.44
TDP1YBR223C SOF1P33750 489 aaKnown RBP6.03□□□□□ -1.44
TDP1YBR223C SDH8P38345 138 aa6.03□□□□□ -1.44
TDP1YBR223C AIR1P40507 360 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms