RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 GOLGA6L3A6NEY3 463 aa7.09□□□□□ -1.27
RTTN-215ENST00000639487 ESPNB1AK53 854 aa7.09□□□□□ -1.27
RTTN-215ENST00000639487 WNT7AO00755 349 aa7.09□□□□□ -1.27
RTTN-215ENST00000639487 ITIH3Q06033 890 aa7.09□□□□□ -1.27
RTTN-215ENST00000639487 TBX2Q13207 712 aaPredicted RBP7.09□□□□□ -1.27
RTTN-215ENST00000639487 TTLL12Q14166 644 aaPredicted RBP7.09□□□□□ -1.27
RTTN-215ENST00000639487 BTG3Q14201 252 aaPredicted RBP7.09□□□□□ -1.27
RTTN-215ENST00000639487 AGERQ15109 404 aa7.09□□□□□ -1.27
RTTN-215ENST00000639487 MAPRE1Q15691 268 aaKnown RBP7.09□□□□□ -1.27
RTTN-215ENST00000639487 LARP1BQ659C4 914 aaKnown RBP7.09□□□□□ -1.27
RTTN-215ENST00000639487 PM20D1Q6GTS8 502 aa7.09□□□□□ -1.27
RTTN-215ENST00000639487 INTS8Q75QN2 995 aaKnown RBP7.09□□□□□ -1.27
RTTN-215ENST00000639487 PABPC5Q96DU9 382 aaKnown RBP7.09□□□□□ -1.27
RTTN-215ENST00000639487 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.09□□□□□ -1.27
RTTN-215ENST00000639487 LARSQ9P2J5 1176 aaKnown RBP7.09□□□□□ -1.27
RTTN-215ENST00000639487 A0A0A6YYK5 440 aaPredicted RBP7.08□□□□□ -1.28
RTTN-215ENST00000639487 TGFB1I1O43294 461 aa7.08□□□□□ -1.28
RTTN-215ENST00000639487 CALUO43852 315 aaPredicted RBP7.08□□□□□ -1.28
RTTN-215ENST00000639487 JAK2O60674 1132 aa7.08□□□□□ -1.28
RTTN-215ENST00000639487 PRDM1O75626 825 aa7.08□□□□□ -1.28
RTTN-215ENST00000639487 INSRRP14616 1297 aa7.08□□□□□ -1.28
RTTN-215ENST00000639487 USP4Q13107 963 aa7.08□□□□□ -1.28
RTTN-215ENST00000639487 SMAD4Q13485 552 aaKnown RBP7.08□□□□□ -1.28
RTTN-215ENST00000639487 RALGPS1Q5JS13 557 aa7.08□□□□□ -1.28
RTTN-215ENST00000639487 ZFYVE27Q5T4F4 411 aa7.08□□□□□ -1.28
RTTN-215ENST00000639487 RUFY4Q6ZNE9 571 aa7.08□□□□□ -1.28
RTTN-215ENST00000639487 FAM114A1Q8IWE2 563 aa7.08□□□□□ -1.28
RTTN-215ENST00000639487 FNIP1Q8TF40 1166 aa7.08□□□□□ -1.28
RTTN-215ENST00000639487 ASB12Q8WXK4 309 aa7.08□□□□□ -1.28
RTTN-215ENST00000639487 MARCH5Q9NX47 278 aa7.08□□□□□ -1.28
RTTN-215ENST00000639487 SCN1AP35498 2009 aa7.08□□□□□ -1.28
RTTN-215ENST00000639487 CHURC1-FNTBB4DL54 471 aa7.08□□□□□ -1.28
RTTN-215ENST00000639487 BACH1O14867 736 aa7.08□□□□□ -1.28
RTTN-215ENST00000639487 YWHAEP62258 255 aaKnown RBP7.08□□□□□ -1.28
RTTN-215ENST00000639487 ADAM15Q13444 863 aa7.08□□□□□ -1.28
RTTN-215ENST00000639487 KIAA0753Q2KHM9 967 aa7.08□□□□□ -1.28
RTTN-215ENST00000639487 SPDYCQ5MJ68 293 aa7.08□□□□□ -1.28
RTTN-215ENST00000639487 TRIM72Q6ZMU5 477 aa7.08□□□□□ -1.28
RTTN-215ENST00000639487 SV2BQ7L1I2 683 aa7.08□□□□□ -1.28
RTTN-215ENST00000639487 ZNF280BQ86YH2 543 aa7.08□□□□□ -1.28
RTTN-215ENST00000639487 ZBTB8OSQ8IWT0 167 aa7.08□□□□□ -1.28
RTTN-215ENST00000639487 CPXM2Q8N436 756 aa7.08□□□□□ -1.28
RTTN-215ENST00000639487 CCDC94Q9BW85 323 aaPredicted RBP7.08□□□□□ -1.28
RTTN-215ENST00000639487 IRF2BPLQ9H1B7 796 aa7.08□□□□□ -1.28
RTTN-215ENST00000639487 MINDY3Q9H8M7 445 aa7.08□□□□□ -1.28
RTTN-215ENST00000639487 TMEM260Q9NX78 707 aa7.08□□□□□ -1.28
RTTN-215ENST00000639487 HDAC6Q9UBN7 1215 aa7.08□□□□□ -1.28
RTTN-215ENST00000639487 LRWD1Q9UFC0 647 aa7.08□□□□□ -1.28
RTTN-215ENST00000639487 UBQLN1Q9UMX0 589 aaKnown RBP7.08□□□□□ -1.28
RTTN-215ENST00000639487 ECI2O75521 394 aa7.08□□□□□ -1.28
RTTN-215ENST00000639487 TUBB4AP04350 444 aa7.08□□□□□ -1.28
RTTN-215ENST00000639487 TBXAS1P24557 533 aaPredicted RBP7.08□□□□□ -1.28
RTTN-215ENST00000639487 NPEPPSP55786 919 aa7.08□□□□□ -1.28
RTTN-215ENST00000639487 MLLT1Q03111 559 aaPredicted RBP7.08□□□□□ -1.28
RTTN-215ENST00000639487 TUSC3Q13454 348 aa7.08□□□□□ -1.28
RTTN-215ENST00000639487 IKBKEQ14164 716 aa7.08□□□□□ -1.28
RTTN-215ENST00000639487 PLS1Q14651 629 aa7.08□□□□□ -1.28
RTTN-215ENST00000639487 KNOP1Q1ED39 458 aaKnown RBP7.08□□□□□ -1.28
RTTN-215ENST00000639487 ZACNQ401N2 412 aa7.08□□□□□ -1.28
RTTN-215ENST00000639487 ZNF280DQ6N043 979 aa7.08□□□□□ -1.28
RTTN-215ENST00000639487 ZNF572Q7Z3I7 529 aaPredicted RBP7.08□□□□□ -1.28
RTTN-215ENST00000639487 USP28Q96RU2 1077 aa7.08□□□□□ -1.28
RTTN-215ENST00000639487 ACBD6Q9BR61 282 aa7.08□□□□□ -1.28
RTTN-215ENST00000639487 UBA5Q9GZZ9 404 aa7.08□□□□□ -1.28
RTTN-215ENST00000639487 HSD3B7Q9H2F3 369 aa7.08□□□□□ -1.28
RTTN-215ENST00000639487 ZNF510Q9Y2H8 683 aa7.08□□□□□ -1.28
RTTN-215ENST00000639487 A0A087X0B3 334 aa7.07□□□□□ -1.28
RTTN-215ENST00000639487 CFAP69A5D8W1 941 aa7.07□□□□□ -1.28
RTTN-215ENST00000639487 RSPH10B2B2RC85 870 aa7.07□□□□□ -1.28
RTTN-215ENST00000639487 PPP1R12AO14974 1030 aaPredicted RBP7.07□□□□□ -1.28
RTTN-215ENST00000639487 CCDC172P0C7W6 258 aa7.07□□□□□ -1.28
RTTN-215ENST00000639487 RSPH10BP0C881 870 aa7.07□□□□□ -1.28
RTTN-215ENST00000639487 TDGF1P13385 188 aa7.07□□□□□ -1.28
RTTN-215ENST00000639487 RAD51AP2Q09MP3 1159 aa7.07□□□□□ -1.28
RTTN-215ENST00000639487 TCTN1Q2MV58 587 aa7.07□□□□□ -1.28
RTTN-215ENST00000639487 MPP7Q5T2T1 576 aa7.07□□□□□ -1.28
RTTN-215ENST00000639487 USP17L6PQ6QN14 398 aa7.07□□□□□ -1.28
RTTN-215ENST00000639487 FBXO22Q8NEZ5 403 aa7.07□□□□□ -1.28
RTTN-215ENST00000639487 ASAP3Q8TDY4 903 aa7.07□□□□□ -1.28
RTTN-215ENST00000639487 TBC1D5Q92609 795 aa7.07□□□□□ -1.28
RTTN-215ENST00000639487 LMLNQ96KR4 655 aa7.07□□□□□ -1.28
RTTN-215ENST00000639487 RNPEPQ9H4A4 650 aa7.07□□□□□ -1.28
RTTN-215ENST00000639487 TMEM8AQ9HCN3 771 aa7.07□□□□□ -1.28
RTTN-215ENST00000639487 CTDP1Q9Y5B0 961 aaPredicted RBP7.07□□□□□ -1.28
RTTN-215ENST00000639487 PEX14O75381 377 aa7.07□□□□□ -1.28
RTTN-215ENST00000639487 SMC2O95347 1197 aa7.07□□□□□ -1.28
RTTN-215ENST00000639487 FGFR1P11362 822 aa7.07□□□□□ -1.28
RTTN-215ENST00000639487 SLC16A2P36021 539 aa7.07□□□□□ -1.28
RTTN-215ENST00000639487 NPTX2P47972 431 aa7.07□□□□□ -1.28
RTTN-215ENST00000639487 PLK1P53350 603 aa7.07□□□□□ -1.28
RTTN-215ENST00000639487 SCAPQ12770 1279 aa7.07□□□□□ -1.28
RTTN-215ENST00000639487 FRG1Q14331 258 aaKnown RBP7.07□□□□□ -1.28
RTTN-215ENST00000639487 SF3A1Q15459 793 aaKnown RBP7.07□□□□□ -1.28
RTTN-215ENST00000639487 LY6KQ17RY6 165 aa7.07□□□□□ -1.28
RTTN-215ENST00000639487 CCDC181Q5TID7 509 aa7.07□□□□□ -1.28
RTTN-215ENST00000639487 MTERF4Q7Z6M4 381 aaKnown RBP7.07□□□□□ -1.28
RTTN-215ENST00000639487 CLEC10AQ8IUN9 316 aa7.07□□□□□ -1.28
RTTN-215ENST00000639487 DYDC2Q96IM9 177 aa7.07□□□□□ -1.28
RTTN-215ENST00000639487 ZNF560Q96MR9 790 aa7.07□□□□□ -1.28
RTTN-215ENST00000639487 XYLT2Q9H1B5 865 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms