RNA–Protein interactions for RNA: ENST00000597968.1

TRIM28-211, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-211ENST00000597968 PEX3P56589 373 aa14.93□□□□□ -0.02
TRIM28-211ENST00000597968 RABEP1Q15276 862 aa14.93□□□□□ -0.02
TRIM28-211ENST00000597968 ZNF568Q3ZCX4 644 aa14.93□□□□□ -0.02
TRIM28-211ENST00000597968 AXDND1Q5T1B0 1012 aaPredicted RBP14.93□□□□□ -0.02
TRIM28-211ENST00000597968 ARL6IP4Q66PJ3 421 aaKnown RBP14.93□□□□□ -0.02
TRIM28-211ENST00000597968 SLC8B1Q6J4K2 584 aa14.93□□□□□ -0.02
TRIM28-211ENST00000597968 RINT1Q6NUQ1 792 aa14.93□□□□□ -0.02
TRIM28-211ENST00000597968 C1orf186Q6ZWK4 172 aa14.93□□□□□ -0.02
TRIM28-211ENST00000597968 GET4Q7L5D6 327 aaPredicted RBP14.93□□□□□ -0.02
TRIM28-211ENST00000597968 DTWD2Q8NBA8 298 aa14.93□□□□□ -0.02
TRIM28-211ENST00000597968 HASPINQ8TF76 798 aa14.93□□□□□ -0.02
TRIM28-211ENST00000597968 ACAP3Q96P50 834 aa14.93□□□□□ -0.02
TRIM28-211ENST00000597968 OXCT2Q9BYC2 517 aaPredicted RBP14.93□□□□□ -0.02
TRIM28-211ENST00000597968 PCDHB6Q9Y5E3 794 aa14.93□□□□□ -0.02
TRIM28-211ENST00000597968 HIP1RO75146 1068 aa14.92□□□□□ -0.02
TRIM28-211ENST00000597968 TOM1L1O75674 476 aa14.92□□□□□ -0.02
TRIM28-211ENST00000597968 LIG1P18858 919 aa14.92□□□□□ -0.02
TRIM28-211ENST00000597968 ABCD1P33897 745 aa14.92□□□□□ -0.02
TRIM28-211ENST00000597968 OR1D2P34982 312 aa14.92□□□□□ -0.02
TRIM28-211ENST00000597968 ATP2C1P98194 919 aaPredicted RBP14.92□□□□□ -0.02
TRIM28-211ENST00000597968 PFKPQ01813 784 aa14.92□□□□□ -0.02
TRIM28-211ENST00000597968 STRN3Q13033 797 aa14.92□□□□□ -0.02
TRIM28-211ENST00000597968 MPZL3Q6UWV2 235 aa14.92□□□□□ -0.02
TRIM28-211ENST00000597968 RSPO2Q6UXX9 243 aaPredicted RBP14.92□□□□□ -0.02
TRIM28-211ENST00000597968 ZPBP2Q6X784 338 aa14.92□□□□□ -0.02
TRIM28-211ENST00000597968 GRASPQ7Z6J2 395 aaPredicted RBP14.92□□□□□ -0.02
TRIM28-211ENST00000597968 GLYCTKQ8IVS8 523 aa14.92□□□□□ -0.02
TRIM28-211ENST00000597968 DAW1Q8N136 415 aa14.92□□□□□ -0.02
TRIM28-211ENST00000597968 SYT2Q8N9I0 419 aaPredicted RBP14.92□□□□□ -0.02
TRIM28-211ENST00000597968 ZNF461Q8TAF7 563 aa14.92□□□□□ -0.02
TRIM28-211ENST00000597968 RABGGTAQ92696 567 aa14.92□□□□□ -0.02
TRIM28-211ENST00000597968 NKD2Q969F2 451 aaPredicted RBP14.92□□□□□ -0.02
TRIM28-211ENST00000597968 AK8Q96MA6 479 aa14.92□□□□□ -0.02
TRIM28-211ENST00000597968 TSPAN18Q96SJ8 248 aa14.92□□□□□ -0.02
TRIM28-211ENST00000597968 KIFC3Q9BVG8 833 aa14.92□□□□□ -0.02
TRIM28-211ENST00000597968 CDT1Q9H211 546 aa14.92□□□□□ -0.02
TRIM28-211ENST00000597968 ARHGEF3Q9NR81 526 aa14.92□□□□□ -0.02
TRIM28-211ENST00000597968 FAM86C1Q9NVL1 165 aa14.92□□□□□ -0.02
TRIM28-211ENST00000597968 GDE1Q9NZC3 331 aa14.92□□□□□ -0.02
TRIM28-211ENST00000597968 CNTN3Q9P232 1028 aa14.92□□□□□ -0.02
TRIM28-211ENST00000597968 CFAP54Q96N23 3096 aa14.92□□□□□ -0.02
TRIM28-211ENST00000597968 VPS13AQ96RL7 3174 aa14.92□□□□□ -0.02
TRIM28-211ENST00000597968 ARHGEF37A1IGU5 675 aa14.91□□□□□ -0.02
TRIM28-211ENST00000597968 KRBA1A5PL33 1030 aa14.91□□□□□ -0.02
TRIM28-211ENST00000597968 PRR23AA6NEV1 266 aa14.91□□□□□ -0.02
TRIM28-211ENST00000597968 E9PMD0 336 aa14.91□□□□□ -0.02
TRIM28-211ENST00000597968 H7C4K7 107 aa14.91□□□□□ -0.02
TRIM28-211ENST00000597968 NARSO43776 548 aaKnown RBP14.91□□□□□ -0.02
TRIM28-211ENST00000597968 MICAL2O94851 1124 aa14.91□□□□□ -0.02
TRIM28-211ENST00000597968 CFHP08603 1231 aa14.91□□□□□ -0.02
TRIM28-211ENST00000597968 RFX1P22670 979 aa14.91□□□□□ -0.02
TRIM28-211ENST00000597968 MCM2P49736 904 aa14.91□□□□□ -0.02
TRIM28-211ENST00000597968 STARD6P59095 220 aa14.91□□□□□ -0.02
TRIM28-211ENST00000597968 PRKCQQ04759 706 aa14.91□□□□□ -0.02
TRIM28-211ENST00000597968 MAPK7Q13164 816 aa14.91□□□□□ -0.02
TRIM28-211ENST00000597968 ANGPT1Q15389 498 aa14.91□□□□□ -0.02
TRIM28-211ENST00000597968 KYAT1Q16773 422 aa14.91□□□□□ -0.02
TRIM28-211ENST00000597968 TPGS2Q68CL5 300 aa14.91□□□□□ -0.02
TRIM28-211ENST00000597968 SLC7A14Q8TBB6 771 aa14.91□□□□□ -0.02
TRIM28-211ENST00000597968 RSAD2Q8WXG1 361 aa14.91□□□□□ -0.02
TRIM28-211ENST00000597968 FGF13Q92913 245 aa14.91□□□□□ -0.02
TRIM28-211ENST00000597968 SNX27Q96L92 541 aa14.91□□□□□ -0.02
TRIM28-211ENST00000597968 TCHPQ9BT92 498 aa14.91□□□□□ -0.02
TRIM28-211ENST00000597968 OSBPL6Q9BZF3 934 aa14.91□□□□□ -0.02
TRIM28-211ENST00000597968 PLEKHA5Q9HAU0 1116 aa14.91□□□□□ -0.02
TRIM28-211ENST00000597968 LARSQ9P2J5 1176 aaKnown RBP14.91□□□□□ -0.02
TRIM28-211ENST00000597968 CACNG4Q9UBN1 327 aa14.91□□□□□ -0.02
TRIM28-211ENST00000597968 CDY1Q9Y6F8 540 aa14.91□□□□□ -0.02
TRIM28-211ENST00000597968 NUMBLQ9Y6R0 609 aa14.91□□□□□ -0.02
TRIM28-211ENST00000597968 ABLIM1O14639 778 aa14.9□□□□□ -0.02
TRIM28-211ENST00000597968 PI15O43692 258 aa14.9□□□□□ -0.02
TRIM28-211ENST00000597968 ABLIM3O94929 683 aa14.9□□□□□ -0.02
TRIM28-211ENST00000597968 PLS3P13797 630 aa14.9□□□□□ -0.02
TRIM28-211ENST00000597968 ATF2P15336 505 aa14.9□□□□□ -0.02
TRIM28-211ENST00000597968 PAX3P23760 479 aa14.9□□□□□ -0.02
TRIM28-211ENST00000597968 MAGEA9P43362 315 aa14.9□□□□□ -0.02
TRIM28-211ENST00000597968 NBR1Q14596 966 aa14.9□□□□□ -0.02
TRIM28-211ENST00000597968 PABPC1LQ4VXU2 614 aaKnown RBP14.9□□□□□ -0.02
TRIM28-211ENST00000597968 GLRA4Q5JXX5 417 aa14.9□□□□□ -0.02
TRIM28-211ENST00000597968 CD300LGQ6UXG3 332 aa14.9□□□□□ -0.02
TRIM28-211ENST00000597968 GPR152Q8TDT2 470 aa14.9□□□□□ -0.02
TRIM28-211ENST00000597968 MMTAG2Q9BU76 263 aaKnown RBP14.9□□□□□ -0.02
TRIM28-211ENST00000597968 TBC1D17Q9HA65 648 aa14.9□□□□□ -0.02
TRIM28-211ENST00000597968 SIT1Q9Y3P8 196 aa14.9□□□□□ -0.02
TRIM28-211ENST00000597968 STK25O00506 426 aa14.89□□□□□ -0.03
TRIM28-211ENST00000597968 PODXLO00592 558 aa14.89□□□□□ -0.03
TRIM28-211ENST00000597968 TBC1D4O60343 1298 aa14.89□□□□□ -0.03
TRIM28-211ENST00000597968 BMP15O95972 392 aa14.89□□□□□ -0.03
TRIM28-211ENST00000597968 TKTP29401 623 aaKnown RBP14.89□□□□□ -0.03
TRIM28-211ENST00000597968 ELF1P32519 619 aa14.89□□□□□ -0.03
TRIM28-211ENST00000597968 FOXK2Q01167 660 aa14.89□□□□□ -0.03
TRIM28-211ENST00000597968 MRPL58Q14197 206 aaKnown RBP14.89□□□□□ -0.03
TRIM28-211ENST00000597968 IL17AQ16552 155 aa14.89□□□□□ -0.03
TRIM28-211ENST00000597968 ZC3H14Q6PJT7 736 aaKnown RBP14.89□□□□□ -0.03
TRIM28-211ENST00000597968 TAS1R3Q7RTX0 852 aa14.89□□□□□ -0.03
TRIM28-211ENST00000597968 TCEAL8Q8IYN2 117 aa14.89□□□□□ -0.03
TRIM28-211ENST00000597968 LEMD2Q8NC56 503 aa14.89□□□□□ -0.03
TRIM28-211ENST00000597968 TMEM161BQ8NDZ6 487 aa14.89□□□□□ -0.03
TRIM28-211ENST00000597968 APPL2Q8NEU8 664 aa14.89□□□□□ -0.03
TRIM28-211ENST00000597968 CDK5RAP3Q96JB5 506 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms