RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 DMDP11532 3685 aa19.26■□□□□ 0.67
SHKBP1-203ENST00000594298 MTCL1Q9Y4B5 1905 aaKnown RBP19.26■□□□□ 0.67
SHKBP1-203ENST00000594298 STARD6P59095 220 aa19.26■□□□□ 0.67
SHKBP1-203ENST00000594298 NTHL1P78549 312 aa19.26■□□□□ 0.67
SHKBP1-203ENST00000594298 RESTQ13127 1097 aa19.26■□□□□ 0.67
SHKBP1-203ENST00000594298 ATF7IP2Q5U623 682 aa19.26■□□□□ 0.67
SHKBP1-203ENST00000594298 PARM1Q6UWI2 310 aa19.26■□□□□ 0.67
SHKBP1-203ENST00000594298 MTSS1LQ765P7 747 aa19.26■□□□□ 0.67
SHKBP1-203ENST00000594298 APBB1IPQ7Z5R6 666 aaPredicted RBP19.26■□□□□ 0.67
SHKBP1-203ENST00000594298 KCTD17Q8N5Z5 321 aa19.26■□□□□ 0.67
SHKBP1-203ENST00000594298 SNX29Q8TEQ0 813 aa19.26■□□□□ 0.67
SHKBP1-203ENST00000594298 FGF13Q92913 245 aa19.26■□□□□ 0.67
SHKBP1-203ENST00000594298 FGF14Q92915 247 aa19.26■□□□□ 0.67
SHKBP1-203ENST00000594298 IFT74Q96LB3 600 aa19.26■□□□□ 0.67
SHKBP1-203ENST00000594298 UROC1Q96N76 676 aa19.26■□□□□ 0.67
SHKBP1-203ENST00000594298 RPP25Q9BUL9 199 aaKnown RBP19.26■□□□□ 0.67
SHKBP1-203ENST00000594298 KIFC3Q9BVG8 833 aa19.26■□□□□ 0.67
SHKBP1-203ENST00000594298 MTRRQ9UBK8 725 aa19.26■□□□□ 0.67
SHKBP1-203ENST00000594298 GDAQ9Y2T3 454 aa19.26■□□□□ 0.67
SHKBP1-203ENST00000594298 DOCK8Q8NF50 2099 aa19.25■□□□□ 0.67
SHKBP1-203ENST00000594298 B3GAT3O94766 335 aa19.25■□□□□ 0.67
SHKBP1-203ENST00000594298 DCNP07585 359 aaKnown RBP19.25■□□□□ 0.67
SHKBP1-203ENST00000594298 LIG1P18858 919 aa19.25■□□□□ 0.67
SHKBP1-203ENST00000594298 GPC5P78333 572 aa19.25■□□□□ 0.67
SHKBP1-203ENST00000594298 BECN1Q14457 450 aa19.25■□□□□ 0.67
SHKBP1-203ENST00000594298 SF3A1Q15459 793 aaKnown RBP19.25■□□□□ 0.67
SHKBP1-203ENST00000594298 ECM1Q16610 540 aa19.25■□□□□ 0.67
SHKBP1-203ENST00000594298 UPP1Q16831 310 aa19.25■□□□□ 0.67
SHKBP1-203ENST00000594298 AXDND1Q5T1B0 1012 aaPredicted RBP19.25■□□□□ 0.67
SHKBP1-203ENST00000594298 NT5DC1Q5TFE4 455 aa19.25■□□□□ 0.67
SHKBP1-203ENST00000594298 CD300LGQ6UXG3 332 aa19.25■□□□□ 0.67
SHKBP1-203ENST00000594298 PJA1Q8NG27 643 aa19.25■□□□□ 0.67
SHKBP1-203ENST00000594298 SLC7A14Q8TBB6 771 aa19.25■□□□□ 0.67
SHKBP1-203ENST00000594298 SHDQ96IW2 340 aa19.25■□□□□ 0.67
SHKBP1-203ENST00000594298 AK8Q96MA6 479 aa19.25■□□□□ 0.67
SHKBP1-203ENST00000594298 BHMT2Q9H2M3 363 aa19.25■□□□□ 0.67
SHKBP1-203ENST00000594298 KCNH3Q9ULD8 1083 aa19.25■□□□□ 0.67
SHKBP1-203ENST00000594298 TNFSF13BQ9Y275 285 aa19.25■□□□□ 0.67
SHKBP1-203ENST00000594298 BACE2Q9Y5Z0 518 aa19.25■□□□□ 0.67
SHKBP1-203ENST00000594298 VWA3AA6NCI4 1184 aa19.24■□□□□ 0.67
SHKBP1-203ENST00000594298 CCL16O15467 120 aa19.24■□□□□ 0.67
SHKBP1-203ENST00000594298 SLC26A4O43511 780 aa19.24■□□□□ 0.67
SHKBP1-203ENST00000594298 OR1D2P34982 312 aa19.24■□□□□ 0.67
SHKBP1-203ENST00000594298 CLCNKBP51801 687 aa19.24■□□□□ 0.67
SHKBP1-203ENST00000594298 IL17AQ16552 155 aa19.24■□□□□ 0.67
SHKBP1-203ENST00000594298 ANKS3Q6ZW76 656 aa19.24■□□□□ 0.67
SHKBP1-203ENST00000594298 KIAA1024Q9UPX6 916 aa19.24■□□□□ 0.67
SHKBP1-203ENST00000594298 DNM3Q9UQ16 869 aa19.24■□□□□ 0.67
SHKBP1-203ENST00000594298 K7ERI5 159 aa19.23■□□□□ 0.67
SHKBP1-203ENST00000594298 TRAPPC3O43617 180 aa19.23■□□□□ 0.67
SHKBP1-203ENST00000594298 LMNAP02545 664 aaKnown RBP19.23■□□□□ 0.67
SHKBP1-203ENST00000594298 IGFBP6P24592 240 aaPredicted RBP19.23■□□□□ 0.67
SHKBP1-203ENST00000594298 XKR4Q5GH76 650 aa19.23■□□□□ 0.67
SHKBP1-203ENST00000594298 GLRA4Q5JXX5 417 aa19.23■□□□□ 0.67
SHKBP1-203ENST00000594298 SPECC1Q5M775 1068 aa19.23■□□□□ 0.67
SHKBP1-203ENST00000594298 C1orf210Q8IVY1 113 aa19.23■□□□□ 0.67
SHKBP1-203ENST00000594298 SPRYD3Q8NCJ5 442 aa19.23■□□□□ 0.67
SHKBP1-203ENST00000594298 ST13P5Q8NFI4 369 aaPredicted RBP19.23■□□□□ 0.67
SHKBP1-203ENST00000594298 ITFG1Q8TB96 612 aa19.23■□□□□ 0.67
SHKBP1-203ENST00000594298 CDK5RAP3Q96JB5 506 aa19.23■□□□□ 0.67
SHKBP1-203ENST00000594298 DDX23Q9BUQ8 820 aaKnown RBP19.23■□□□□ 0.67
SHKBP1-203ENST00000594298 POLIQ9UNA4 740 aa19.23■□□□□ 0.67
SHKBP1-203ENST00000594298 SMIM28A0A1B0GU29 152 aa19.22■□□□□ 0.67
SHKBP1-203ENST00000594298 LONP1P36776 959 aaKnown RBP19.22■□□□□ 0.67
SHKBP1-203ENST00000594298 GRM5P41594 1212 aa19.22■□□□□ 0.67
SHKBP1-203ENST00000594298 PRKCQQ04759 706 aa19.22■□□□□ 0.67
SHKBP1-203ENST00000594298 PABPC1LQ4VXU2 614 aaKnown RBP19.22■□□□□ 0.67
SHKBP1-203ENST00000594298 ZC3H14Q6PJT7 736 aaKnown RBP19.22■□□□□ 0.67
SHKBP1-203ENST00000594298 ALKAL1Q6UXT8 129 aa19.22■□□□□ 0.67
SHKBP1-203ENST00000594298 RSPO2Q6UXX9 243 aaPredicted RBP19.22■□□□□ 0.67
SHKBP1-203ENST00000594298 ERMP1Q7Z2K6 904 aa19.22■□□□□ 0.67
SHKBP1-203ENST00000594298 DDX27Q96GQ7 796 aaKnown RBP19.22■□□□□ 0.67
SHKBP1-203ENST00000594298 ZNF396Q96N95 335 aaPredicted RBP19.22■□□□□ 0.67
SHKBP1-203ENST00000594298 FOXQ1Q9C009 403 aa19.22■□□□□ 0.67
SHKBP1-203ENST00000594298 TMEM134Q9H6X4 195 aa19.22■□□□□ 0.67
SHKBP1-203ENST00000594298 POLD4Q9HCU8 107 aa19.22■□□□□ 0.67
SHKBP1-203ENST00000594298 PTPRHQ9HD43 1115 aa19.22■□□□□ 0.67
SHKBP1-203ENST00000594298 TOPORSQ9NS56 1045 aaPredicted RBP19.22■□□□□ 0.67
SHKBP1-203ENST00000594298 DDX19AQ9NUU7 478 aaKnown RBP19.22■□□□□ 0.67
SHKBP1-203ENST00000594298 DNMT3BQ9UBC3 853 aaKnown RBP19.22■□□□□ 0.67
SHKBP1-203ENST00000594298 CDY1Q9Y6F8 540 aa19.22■□□□□ 0.67
SHKBP1-203ENST00000594298 VPS13AQ96RL7 3174 aa19.22■□□□□ 0.67
SHKBP1-203ENST00000594298 PHLPP2Q6ZVD8 1323 aa19.22■□□□□ 0.67
SHKBP1-203ENST00000594298 KANSL1LA0AUZ9 987 aa19.21■□□□□ 0.67
SHKBP1-203ENST00000594298 SP9P0CG40 484 aa19.21■□□□□ 0.67
SHKBP1-203ENST00000594298 GLULP15104 373 aa19.21■□□□□ 0.67
SHKBP1-203ENST00000594298 PTPRZ1P23471 2315 aaPredicted RBP19.21■□□□□ 0.67
SHKBP1-203ENST00000594298 TKTP29401 623 aaKnown RBP19.21■□□□□ 0.67
SHKBP1-203ENST00000594298 UBA7P41226 1012 aa19.21■□□□□ 0.67
SHKBP1-203ENST00000594298 ID4P47928 161 aa19.21■□□□□ 0.67
SHKBP1-203ENST00000594298 YARSP54577 528 aaKnown RBP19.21■□□□□ 0.67
SHKBP1-203ENST00000594298 PFKPQ01813 784 aa19.21■□□□□ 0.67
SHKBP1-203ENST00000594298 SLC8B1Q6J4K2 584 aa19.21■□□□□ 0.67
SHKBP1-203ENST00000594298 NPAS3Q8IXF0 933 aa19.21■□□□□ 0.67
SHKBP1-203ENST00000594298 C3orf58Q8NDZ4 430 aa19.21■□□□□ 0.67
SHKBP1-203ENST00000594298 ACO2Q99798 780 aaKnown RBP19.21■□□□□ 0.67
SHKBP1-203ENST00000594298 CCDC94Q9BW85 323 aaPredicted RBP19.21■□□□□ 0.67
SHKBP1-203ENST00000594298 CDT1Q9H211 546 aa19.21■□□□□ 0.67
SHKBP1-203ENST00000594298 GOLGA2P5Q9HBQ8 144 aa19.21■□□□□ 0.67
SHKBP1-203ENST00000594298 AVENQ9NQS1 362 aaPredicted RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms