RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 TMEM191BP0C7N4 346 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 CCDC172P0C7W6 258 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 HSPA6P17066 643 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 GRM5P41594 1212 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 MFAP3P55082 362 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 GCNT1Q02742 428 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 ITGA7Q13683 1181 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 SPA17Q15506 151 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 PTGISQ16647 500 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 DUOXA2Q1HG44 320 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 WDR44Q5JSH3 913 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 KAT5Q92993 513 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 WNT8BQ93098 351 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 ANKRD36BP1Q96IX9 119 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 GLT1D1Q96MS3 346 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 KREMEN1Q96MU8 473 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 ASB7Q9H672 318 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 PIN4Q9Y237 131 aaKnown RBP12.3□□□□□ -0.44
SMAD4-205ENST00000588745 CDY2AQ9Y6F7 541 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 MROH7Q68CQ1 1323 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 A0A0U1RQJ8 604 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 CITO14578 2027 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 MEFVO15553 781 aaPredicted RBP12.3□□□□□ -0.44
SMAD4-205ENST00000588745 PHACTR2O75167 634 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 TNNC2P02585 160 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 ARHGAP25P42331 645 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 HTTP42858 3142 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 VAV2P52735 878 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 TFAMQ00059 246 aaKnown RBP12.3□□□□□ -0.44
SMAD4-205ENST00000588745 PTK2Q05397 1052 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 GFPT1Q06210 699 aaPredicted RBP12.3□□□□□ -0.44
SMAD4-205ENST00000588745 MGAT3Q09327 533 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 NCOA4Q13772 614 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 SLC18A3Q16572 532 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 ARHGAP29Q52LW3 1261 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 ZNF662Q6ZS27 426 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 ENOSF1Q7L5Y1 443 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 TRAPPC11Q7Z392 1133 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 ZNF571Q7Z3V5 609 aaPredicted RBP12.3□□□□□ -0.44
SMAD4-205ENST00000588745 KIAA1328Q86T90 577 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 SH3TC2Q8TF17 1288 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 ATRIPQ8WXE1 791 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 SHC3Q92529 594 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 PI4K2AQ9BTU6 479 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 CCDC94Q9BW85 323 aaPredicted RBP12.3□□□□□ -0.44
SMAD4-205ENST00000588745 IMPG2Q9BZV3 1241 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 SENP6Q9GZR1 1112 aaPredicted RBP12.3□□□□□ -0.44
SMAD4-205ENST00000588745 LZTFL1Q9NQ48 299 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.3□□□□□ -0.44
SMAD4-205ENST00000588745 PTPN22Q9Y2R2 807 aa12.3□□□□□ -0.44
SMAD4-205ENST00000588745 A0A1W2PQ45 241 aaPredicted RBP12.29□□□□□ -0.44
SMAD4-205ENST00000588745 A0A1W2PQY0 241 aa12.29□□□□□ -0.44
SMAD4-205ENST00000588745 LACTBL1A8MY62 500 aa12.29□□□□□ -0.44
SMAD4-205ENST00000588745 FOXN3O00409 490 aaPredicted RBP12.29□□□□□ -0.44
SMAD4-205ENST00000588745 NFICP08651 508 aa12.29□□□□□ -0.44
SMAD4-205ENST00000588745 CTSHP09668 335 aa12.29□□□□□ -0.44
SMAD4-205ENST00000588745 NOP14P78316 857 aaKnown RBP12.29□□□□□ -0.44
SMAD4-205ENST00000588745 CYP27A1Q02318 531 aa12.29□□□□□ -0.44
SMAD4-205ENST00000588745 PTK7Q13308 1070 aa12.29□□□□□ -0.44
SMAD4-205ENST00000588745 SLC10A6Q3KNW5 377 aa12.29□□□□□ -0.44
SMAD4-205ENST00000588745 JADE1Q6IE81 842 aa12.29□□□□□ -0.44
SMAD4-205ENST00000588745 VPS36Q86VN1 386 aa12.29□□□□□ -0.44
SMAD4-205ENST00000588745 FAM228AQ86W67 206 aa12.29□□□□□ -0.44
SMAD4-205ENST00000588745 CD302Q8IX05 232 aa12.29□□□□□ -0.44
SMAD4-205ENST00000588745 ARRDC4Q8NCT1 418 aa12.29□□□□□ -0.44
SMAD4-205ENST00000588745 TATDN2Q93075 761 aa12.29□□□□□ -0.44
SMAD4-205ENST00000588745 JAKMIP2Q96AA8 810 aa12.29□□□□□ -0.44
SMAD4-205ENST00000588745 ACAP3Q96P50 834 aa12.29□□□□□ -0.44
SMAD4-205ENST00000588745 EIF2AQ9BY44 585 aaKnown RBP12.29□□□□□ -0.44
SMAD4-205ENST00000588745 IFIH1Q9BYX4 1025 aaKnown RBP12.29□□□□□ -0.44
SMAD4-205ENST00000588745 WBP1LQ9NX94 342 aa12.29□□□□□ -0.44
SMAD4-205ENST00000588745 PHF24Q9UPV7 400 aa12.29□□□□□ -0.44
SMAD4-205ENST00000588745 NOD1Q9Y239 953 aa12.29□□□□□ -0.44
SMAD4-205ENST00000588745 NOC2LQ9Y3T9 749 aaKnown RBP12.29□□□□□ -0.44
SMAD4-205ENST00000588745 A0A087X0T9 212 aa12.28□□□□□ -0.44
SMAD4-205ENST00000588745 KBTBD13C9JR72 458 aa12.28□□□□□ -0.44
SMAD4-205ENST00000588745 CLSTN1O94985 981 aa12.28□□□□□ -0.44
SMAD4-205ENST00000588745 ASS1P00966 412 aaKnown RBP12.28□□□□□ -0.44
SMAD4-205ENST00000588745 FAM228BP0C875 321 aa12.28□□□□□ -0.44
SMAD4-205ENST00000588745 ETF1P62495 437 aaKnown RBP12.28□□□□□ -0.44
SMAD4-205ENST00000588745 TRPC3Q13507 836 aa12.28□□□□□ -0.44
SMAD4-205ENST00000588745 CUL2Q13617 745 aa12.28□□□□□ -0.44
SMAD4-205ENST00000588745 BMS1Q14692 1282 aaKnown RBP12.28□□□□□ -0.44
SMAD4-205ENST00000588745 UBXN11Q5T124 520 aa12.28□□□□□ -0.44
SMAD4-205ENST00000588745 SPOPLQ6IQ16 392 aa12.28□□□□□ -0.44
SMAD4-205ENST00000588745 NT5DC4Q86YG4 428 aa12.28□□□□□ -0.44
SMAD4-205ENST00000588745 FAM71AQ8IYT1 594 aa12.28□□□□□ -0.44
SMAD4-205ENST00000588745 TXLNBQ8N3L3 684 aa12.28□□□□□ -0.44
SMAD4-205ENST00000588745 OLIG1Q8TAK6 271 aa12.28□□□□□ -0.44
SMAD4-205ENST00000588745 ELMO3Q96BJ8 720 aa12.28□□□□□ -0.44
SMAD4-205ENST00000588745 SNX27Q96L92 541 aa12.28□□□□□ -0.44
SMAD4-205ENST00000588745 SYT11Q9BT88 431 aa12.28□□□□□ -0.44
SMAD4-205ENST00000588745 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.28□□□□□ -0.44
SMAD4-205ENST00000588745 TRIM6Q9C030 488 aaPredicted RBP12.28□□□□□ -0.44
SMAD4-205ENST00000588745 UNC93B1Q9H1C4 597 aa12.28□□□□□ -0.44
SMAD4-205ENST00000588745 APOBEC3GQ9HC16 384 aaKnown RBP12.28□□□□□ -0.44
SMAD4-205ENST00000588745 LUC7LQ9NQ29 371 aaKnown RBP12.28□□□□□ -0.44
SMAD4-205ENST00000588745 TRMT13Q9NUP7 481 aaKnown RBP12.28□□□□□ -0.44
SMAD4-205ENST00000588745 SNTG2Q9NY99 539 aa12.28□□□□□ -0.44
SMAD4-205ENST00000588745 NENFQ9UMX5 172 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms