RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 SGSM1Q2NKQ1 1148 aa11.41□□□□□ -0.58
NEDD4L-224ENST00000588712 SEZ6Q53EL9 994 aa11.41□□□□□ -0.58
NEDD4L-224ENST00000588712 CDR2LQ86X02 465 aaPredicted RBP11.41□□□□□ -0.58
NEDD4L-224ENST00000588712 LMO3Q8TAP4 145 aa11.41□□□□□ -0.58
NEDD4L-224ENST00000588712 PGBD4Q96DM1 585 aa11.41□□□□□ -0.58
NEDD4L-224ENST00000588712 GANQ9H2C0 597 aa11.41□□□□□ -0.58
NEDD4L-224ENST00000588712 C1orf112Q9NSG2 853 aa11.41□□□□□ -0.58
NEDD4L-224ENST00000588712 RNF216Q9NWF9 866 aaPredicted RBP11.41□□□□□ -0.58
NEDD4L-224ENST00000588712 AIPL1Q9NZN9 384 aa11.41□□□□□ -0.58
NEDD4L-224ENST00000588712 PADI3Q9ULW8 664 aa11.41□□□□□ -0.58
NEDD4L-224ENST00000588712 LACTBL1A8MY62 500 aa11.4□□□□□ -0.58
NEDD4L-224ENST00000588712 COL6A1P12109 1028 aa11.4□□□□□ -0.58
NEDD4L-224ENST00000588712 STAT1P42224 750 aa11.4□□□□□ -0.58
NEDD4L-224ENST00000588712 TFAMQ00059 246 aaKnown RBP11.4□□□□□ -0.58
NEDD4L-224ENST00000588712 LPIN1Q14693 890 aa11.4□□□□□ -0.58
NEDD4L-224ENST00000588712 TMEM132DQ14C87 1099 aa11.4□□□□□ -0.58
NEDD4L-224ENST00000588712 MEA1Q16626 185 aa11.4□□□□□ -0.58
NEDD4L-224ENST00000588712 SLC10A6Q3KNW5 377 aa11.4□□□□□ -0.58
NEDD4L-224ENST00000588712 PDXDC1Q6P996 788 aa11.4□□□□□ -0.58
NEDD4L-224ENST00000588712 LRRC8DQ7L1W4 858 aa11.4□□□□□ -0.58
NEDD4L-224ENST00000588712 TRAPPC11Q7Z392 1133 aa11.4□□□□□ -0.58
NEDD4L-224ENST00000588712 CCDC170Q8IYT3 715 aa11.4□□□□□ -0.58
NEDD4L-224ENST00000588712 BAP1Q92560 729 aa11.4□□□□□ -0.58
NEDD4L-224ENST00000588712 ZNF516Q92618 1163 aa11.4□□□□□ -0.58
NEDD4L-224ENST00000588712 SIX2Q9NPC8 291 aa11.4□□□□□ -0.58
NEDD4L-224ENST00000588712 LRRC53A6NM62 1247 aa11.4□□□□□ -0.58
NEDD4L-224ENST00000588712 ZNF623O75123 536 aa11.4□□□□□ -0.58
NEDD4L-224ENST00000588712 GHRP10912 638 aa11.4□□□□□ -0.58
NEDD4L-224ENST00000588712 TBXAS1P24557 533 aaPredicted RBP11.4□□□□□ -0.58
NEDD4L-224ENST00000588712 ANXA13P27216 316 aa11.4□□□□□ -0.58
NEDD4L-224ENST00000588712 ATICP31939 592 aa11.4□□□□□ -0.58
NEDD4L-224ENST00000588712 PIK3CAP42336 1068 aa11.4□□□□□ -0.58
NEDD4L-224ENST00000588712 CCZ1BP86790 482 aa11.4□□□□□ -0.58
NEDD4L-224ENST00000588712 CCZ1P86791 482 aaPredicted RBP11.4□□□□□ -0.58
NEDD4L-224ENST00000588712 GCNT1Q02742 428 aa11.4□□□□□ -0.58
NEDD4L-224ENST00000588712 NCOA4Q13772 614 aa11.4□□□□□ -0.58
NEDD4L-224ENST00000588712 UBXN11Q5T124 520 aa11.4□□□□□ -0.58
NEDD4L-224ENST00000588712 TDRD10Q5VZ19 366 aaKnown RBP11.4□□□□□ -0.58
NEDD4L-224ENST00000588712 DPY19L2P1Q6NXN4 242 aa11.4□□□□□ -0.58
NEDD4L-224ENST00000588712 CEP120Q8N960 986 aa11.4□□□□□ -0.58
NEDD4L-224ENST00000588712 TAS1R2Q8TE23 839 aa11.4□□□□□ -0.58
NEDD4L-224ENST00000588712 ZNF830Q96NB3 372 aaPredicted RBP11.4□□□□□ -0.58
NEDD4L-224ENST00000588712 EIF2AQ9BY44 585 aaKnown RBP11.4□□□□□ -0.58
NEDD4L-224ENST00000588712 KCNF1Q9H3M0 494 aa11.4□□□□□ -0.58
NEDD4L-224ENST00000588712 FAM124BQ9H5Z6 455 aaPredicted RBP11.4□□□□□ -0.58
NEDD4L-224ENST00000588712 C11orf49Q9H6J7 331 aa11.4□□□□□ -0.58
NEDD4L-224ENST00000588712 UBE2TQ9NPD8 197 aaPredicted RBP11.4□□□□□ -0.58
NEDD4L-224ENST00000588712 NLRC4Q9NPP4 1024 aa11.4□□□□□ -0.58
NEDD4L-224ENST00000588712 FAM105AQ9NUU6 356 aa11.4□□□□□ -0.58
NEDD4L-224ENST00000588712 DNAJC12Q9UKB3 198 aa11.4□□□□□ -0.58
NEDD4L-224ENST00000588712 ITGA11Q9UKX5 1188 aa11.4□□□□□ -0.58
NEDD4L-224ENST00000588712 PCDHB2Q9Y5E7 798 aa11.4□□□□□ -0.58
NEDD4L-224ENST00000588712 IPO7O95373 1038 aaKnown RBP11.39□□□□□ -0.59
NEDD4L-224ENST00000588712 HLA-DRAP01903 254 aa11.39□□□□□ -0.59
NEDD4L-224ENST00000588712 SERPING1P05155 500 aa11.39□□□□□ -0.59
NEDD4L-224ENST00000588712 ACTN1P12814 892 aa11.39□□□□□ -0.59
NEDD4L-224ENST00000588712 ITGA4P13612 1032 aa11.39□□□□□ -0.59
NEDD4L-224ENST00000588712 FERP16591 822 aa11.39□□□□□ -0.59
NEDD4L-224ENST00000588712 CD52P31358 61 aa11.39□□□□□ -0.59
NEDD4L-224ENST00000588712 LRMPQ12912 555 aa11.39□□□□□ -0.59
NEDD4L-224ENST00000588712 RAPGEF1Q13905 1077 aa11.39□□□□□ -0.59
NEDD4L-224ENST00000588712 ALKAL1Q6UXT8 129 aa11.39□□□□□ -0.59
NEDD4L-224ENST00000588712 APBB2Q92870 758 aa11.39□□□□□ -0.59
NEDD4L-224ENST00000588712 SNX27Q96L92 541 aa11.39□□□□□ -0.59
NEDD4L-224ENST00000588712 AGO3Q9H9G7 860 aaKnown RBP11.39□□□□□ -0.59
NEDD4L-224ENST00000588712 SNTG2Q9NY99 539 aa11.39□□□□□ -0.59
NEDD4L-224ENST00000588712 CNTN3Q9P232 1028 aa11.39□□□□□ -0.59
NEDD4L-224ENST00000588712 PARP2Q9UGN5 583 aa11.39□□□□□ -0.59
NEDD4L-224ENST00000588712 IPPQ9Y573 584 aa11.39□□□□□ -0.59
NEDD4L-224ENST00000588712 A0A0U1RQF3 1178 aa11.39□□□□□ -0.59
NEDD4L-224ENST00000588712 RNF225M0QZC1 329 aaPredicted RBP11.39□□□□□ -0.59
NEDD4L-224ENST00000588712 EPHB6O15197 1021 aa11.39□□□□□ -0.59
NEDD4L-224ENST00000588712 PQBP1O60828 265 aaKnown RBP11.39□□□□□ -0.59
NEDD4L-224ENST00000588712 P4HA1P13674 534 aa11.39□□□□□ -0.59
NEDD4L-224ENST00000588712 KCNE1P15382 129 aa11.39□□□□□ -0.59
NEDD4L-224ENST00000588712 CYP3A5P20815 502 aa11.39□□□□□ -0.59
NEDD4L-224ENST00000588712 CYLC1P35663 651 aaPredicted RBP11.39□□□□□ -0.59
NEDD4L-224ENST00000588712 RBP5P82980 135 aa11.39□□□□□ -0.59
NEDD4L-224ENST00000588712 XKR4Q5GH76 650 aa11.39□□□□□ -0.59
NEDD4L-224ENST00000588712 JADE1Q6IE81 842 aa11.39□□□□□ -0.59
NEDD4L-224ENST00000588712 IQCEQ6IPM2 695 aa11.39□□□□□ -0.59
NEDD4L-224ENST00000588712 PHLDB3Q6NSJ2 640 aa11.39□□□□□ -0.59
NEDD4L-224ENST00000588712 NECAB2Q7Z6G3 386 aa11.39□□□□□ -0.59
NEDD4L-224ENST00000588712 MRPL10Q7Z7H8 261 aaKnown RBP11.39□□□□□ -0.59
NEDD4L-224ENST00000588712 VPS36Q86VN1 386 aa11.39□□□□□ -0.59
NEDD4L-224ENST00000588712 TXLNBQ8N3L3 684 aa11.39□□□□□ -0.59
NEDD4L-224ENST00000588712 BEST2Q8NFU1 509 aa11.39□□□□□ -0.59
NEDD4L-224ENST00000588712 OR5B17Q8NGF7 314 aa11.39□□□□□ -0.59
NEDD4L-224ENST00000588712 KIF12Q96FN5 646 aa11.39□□□□□ -0.59
NEDD4L-224ENST00000588712 CCDC42Q96M95 316 aa11.39□□□□□ -0.59
NEDD4L-224ENST00000588712 IFIH1Q9BYX4 1025 aaKnown RBP11.39□□□□□ -0.59
NEDD4L-224ENST00000588712 MTMR12Q9C0I1 747 aa11.39□□□□□ -0.59
NEDD4L-224ENST00000588712 SLC38A7Q9NVC3 462 aa11.39□□□□□ -0.59
NEDD4L-224ENST00000588712 UBQLN1Q9UMX0 589 aaKnown RBP11.39□□□□□ -0.59
NEDD4L-224ENST00000588712 GIT1Q9Y2X7 761 aa11.39□□□□□ -0.59
NEDD4L-224ENST00000588712 FHOD1Q9Y613 1164 aa11.39□□□□□ -0.59
NEDD4L-224ENST00000588712 SSU72P8A0A1W2PR75 194 aa11.38□□□□□ -0.59
NEDD4L-224ENST00000588712 ESPNB1AK53 854 aa11.38□□□□□ -0.59
NEDD4L-224ENST00000588712 ZSCAN12O43309 604 aa11.38□□□□□ -0.59
NEDD4L-224ENST00000588712 EOMESO95936 686 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms