RNA–Protein interactions for RNA: ENST00000563425.2

CDH5-204, Transcript of cadherin 5, humanhuman

TSL 5 BASIC

Gene CDH5, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-204ENST00000563425 IQCKQ8N0W5 287 aa20.92■□□□□ 0.94
CDH5-204ENST00000563425 TCP11Q8WWU5 503 aa20.92■□□□□ 0.94
CDH5-204ENST00000563425 L3MBTL3Q96JM7 780 aaPredicted RBP20.92■□□□□ 0.94
CDH5-204ENST00000563425 MROH8Q9H579 483 aa20.92■□□□□ 0.94
CDH5-204ENST00000563425 ERICH4A6NGS2 130 aa20.91■□□□□ 0.94
CDH5-204ENST00000563425 MSCO60682 206 aa20.91■□□□□ 0.94
CDH5-204ENST00000563425 CALCAP01258 141 aa20.91■□□□□ 0.94
CDH5-204ENST00000563425 ACO1P21399 889 aaKnown RBP20.91■□□□□ 0.94
CDH5-204ENST00000563425 MARCKSL1P49006 195 aa20.91■□□□□ 0.94
CDH5-204ENST00000563425 MKRN4PQ13434 485 aaPredicted RBP20.91■□□□□ 0.94
CDH5-204ENST00000563425 CDCA2Q69YH5 1023 aaPredicted RBP20.91■□□□□ 0.94
CDH5-204ENST00000563425 EXOC8Q8IYI6 725 aa20.91■□□□□ 0.94
CDH5-204ENST00000563425 ATP8B4Q8TF62 1192 aa20.91■□□□□ 0.94
CDH5-204ENST00000563425 ZIM3Q96PE6 472 aa20.91■□□□□ 0.94
CDH5-204ENST00000563425 ZHX1Q9UKY1 873 aaPredicted RBP20.91■□□□□ 0.94
CDH5-204ENST00000563425 IGKV6-21A0A0C4DH24 114 aa20.9■□□□□ 0.94
CDH5-204ENST00000563425 GOLGA6L10A0A0M3HER8 536 aa20.9■□□□□ 0.94
CDH5-204ENST00000563425 GOLGA8KD6RF30 607 aa20.9■□□□□ 0.94
CDH5-204ENST00000563425 NOP56O00567 594 aaKnown RBP20.9■□□□□ 0.94
CDH5-204ENST00000563425 TTI1O43156 1089 aa20.9■□□□□ 0.94
CDH5-204ENST00000563425 YBX3P16989 372 aaKnown RBP eCLIP20.9■□□□□ 0.94
CDH5-204ENST00000563425 MARK3P27448 753 aa20.9■□□□□ 0.94
CDH5-204ENST00000563425 HSPA9P38646 679 aaKnown RBP20.9■□□□□ 0.94
CDH5-204ENST00000563425 HLTFQ14527 1009 aaKnown RBP eCLIP20.9■□□□□ 0.94
CDH5-204ENST00000563425 NAA35Q5VZE5 725 aa20.9■□□□□ 0.94
CDH5-204ENST00000563425 SPOPLQ6IQ16 392 aa20.9■□□□□ 0.94
CDH5-204ENST00000563425 CCDC62Q6P9F0 684 aa20.9■□□□□ 0.94
CDH5-204ENST00000563425 TRIM50Q86XT4 487 aa20.9■□□□□ 0.94
CDH5-204ENST00000563425 GOLGA6L1Q8N7Z2 621 aa20.9■□□□□ 0.94
CDH5-204ENST00000563425 MRPL4Q9BYD3 311 aaKnown RBP20.9■□□□□ 0.94
CDH5-204ENST00000563425 APOBEC3GQ9HC16 384 aaKnown RBP20.9■□□□□ 0.94
CDH5-204ENST00000563425 CNOT8Q9UFF9 292 aaKnown RBP20.9■□□□□ 0.94
CDH5-204ENST00000563425 TTLL13PA6NNM8 815 aa20.9■□□□□ 0.94
CDH5-204ENST00000563425 CLDN3O15551 220 aa20.9■□□□□ 0.94
CDH5-204ENST00000563425 FAM189A1O60320 539 aa20.9■□□□□ 0.94
CDH5-204ENST00000563425 HSPA6P17066 643 aa20.9■□□□□ 0.94
CDH5-204ENST00000563425 CTNNA2P26232 953 aa20.9■□□□□ 0.94
CDH5-204ENST00000563425 LAMTOR4Q0VGL1 99 aa20.9■□□□□ 0.94
CDH5-204ENST00000563425 CUL2Q13617 745 aa20.9■□□□□ 0.94
CDH5-204ENST00000563425 MXD4Q14582 209 aaPredicted RBP20.9■□□□□ 0.94
CDH5-204ENST00000563425 CFAP58Q5T655 872 aa20.9■□□□□ 0.94
CDH5-204ENST00000563425 DDX42Q86XP3 938 aaKnown RBP eCLIP20.9■□□□□ 0.94
CDH5-204ENST00000563425 RUFY1Q96T51 708 aa20.9■□□□□ 0.94
CDH5-204ENST00000563425 PLXNB2O15031 1838 aa20.89■□□□□ 0.94
CDH5-204ENST00000563425 LOC102724159A0A0B4J2E5 919 aa20.89■□□□□ 0.93
CDH5-204ENST00000563425 CCDC66A2RUB6 948 aa20.89■□□□□ 0.93
CDH5-204ENST00000563425 TOM1L1O75674 476 aa20.89■□□□□ 0.93
CDH5-204ENST00000563425 EPHX2P34913 555 aa20.89■□□□□ 0.93
CDH5-204ENST00000563425 CTNNA1P35221 906 aaKnown RBP20.89■□□□□ 0.93
CDH5-204ENST00000563425 PLCB4Q15147 1175 aa20.89■□□□□ 0.93
CDH5-204ENST00000563425 PWP2Q15269 919 aaKnown RBP20.89■□□□□ 0.93
CDH5-204ENST00000563425 DPY19L2Q6NUT2 758 aa20.89■□□□□ 0.93
CDH5-204ENST00000563425 BRSK2Q8IWQ3 736 aa20.89■□□□□ 0.93
CDH5-204ENST00000563425 FBXO16Q8IX29 292 aaPredicted RBP20.89■□□□□ 0.93
CDH5-204ENST00000563425 DHX37Q8IY37 1157 aaKnown RBP20.89■□□□□ 0.93
CDH5-204ENST00000563425 OR5B17Q8NGF7 314 aa20.89■□□□□ 0.93
CDH5-204ENST00000563425 PIK3R5Q8WYR1 880 aa20.89■□□□□ 0.93
CDH5-204ENST00000563425 BTBD6Q96KE9 485 aa20.89■□□□□ 0.93
CDH5-204ENST00000563425 CELF4Q9BZC1 486 aaKnown RBP20.89■□□□□ 0.93
CDH5-204ENST00000563425 ERVK-5Q9HDB9 667 aa20.89■□□□□ 0.93
CDH5-204ENST00000563425 ZSWIM8A7E2V4 1837 aa20.89■□□□□ 0.93
CDH5-204ENST00000563425 CLTAP09496 248 aa20.88■□□□□ 0.93
CDH5-204ENST00000563425 PPFIA1Q13136 1202 aa20.88■□□□□ 0.93
CDH5-204ENST00000563425 GRM1Q13255 1194 aa20.88■□□□□ 0.93
CDH5-204ENST00000563425 SEZ6Q53EL9 994 aa20.88■□□□□ 0.93
CDH5-204ENST00000563425 AADACL2Q6P093 401 aa20.88■□□□□ 0.93
CDH5-204ENST00000563425 ARMC9Q7Z3E5 817 aa20.88■□□□□ 0.93
CDH5-204ENST00000563425 ADAT2Q7Z6V5 191 aaKnown RBP20.88■□□□□ 0.93
CDH5-204ENST00000563425 MCOLN2Q8IZK6 566 aa20.88■□□□□ 0.93
CDH5-204ENST00000563425 SPATA33Q96N06 139 aa20.88■□□□□ 0.93
CDH5-204ENST00000563425 ACO2Q99798 780 aaKnown RBP20.88■□□□□ 0.93
CDH5-204ENST00000563425 AVENQ9NQS1 362 aaPredicted RBP20.88■□□□□ 0.93
CDH5-204ENST00000563425 CNTN6Q9UQ52 1028 aa20.88■□□□□ 0.93
CDH5-204ENST00000563425 PCDHA3Q9Y5H8 950 aa20.88■□□□□ 0.93
CDH5-204ENST00000563425 SCN4AP35499 1836 aa20.88■□□□□ 0.93
CDH5-204ENST00000563425 GOLGA6CA6NDK9 693 aa20.88■□□□□ 0.93
CDH5-204ENST00000563425 DAPK3O43293 454 aa20.88■□□□□ 0.93
CDH5-204ENST00000563425 SPOPO43791 374 aa20.88■□□□□ 0.93
CDH5-204ENST00000563425 GOLGA6DP0CG33 693 aa20.88■□□□□ 0.93
CDH5-204ENST00000563425 SRGAP2CP0DJJ0 459 aa20.88■□□□□ 0.93
CDH5-204ENST00000563425 HARSP12081 509 aaKnown RBP20.88■□□□□ 0.93
CDH5-204ENST00000563425 TBXAS1P24557 533 aaPredicted RBP20.88■□□□□ 0.93
CDH5-204ENST00000563425 AP3M2P53677 418 aa20.88■□□□□ 0.93
CDH5-204ENST00000563425 ZBTB8OSQ8IWT0 167 aa20.88■□□□□ 0.93
CDH5-204ENST00000563425 SHCBP1Q8NEM2 672 aa20.88■□□□□ 0.93
CDH5-204ENST00000563425 TRIM11Q96F44 468 aa20.88■□□□□ 0.93
CDH5-204ENST00000563425 NEUROG2Q9H2A3 272 aa20.88■□□□□ 0.93
CDH5-204ENST00000563425 FAM114A2Q9NRY5 505 aa20.88■□□□□ 0.93
CDH5-204ENST00000563425 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.88■□□□□ 0.93
CDH5-204ENST00000563425 GOLGA6AQ9NYA3 693 aa20.88■□□□□ 0.93
CDH5-204ENST00000563425 UTP11Q9Y3A2 253 aaKnown RBP20.88■□□□□ 0.93
CDH5-204ENST00000563425 CYP1A1P04798 512 aaPredicted RBP20.87■□□□□ 0.93
CDH5-204ENST00000563425 MYBL1P10243 752 aa20.87■□□□□ 0.93
CDH5-204ENST00000563425 GJA5P36382 358 aa20.87■□□□□ 0.93
CDH5-204ENST00000563425 SLC26A2P50443 739 aa20.87■□□□□ 0.93
CDH5-204ENST00000563425 NOP14P78316 857 aaKnown RBP20.87■□□□□ 0.93
CDH5-204ENST00000563425 CENPCQ03188 943 aa20.87■□□□□ 0.93
CDH5-204ENST00000563425 DHX34Q14147 1143 aaKnown RBP20.87■□□□□ 0.93
CDH5-204ENST00000563425 SEL1L2Q5TEA6 688 aa20.87■□□□□ 0.93
CDH5-204ENST00000563425 WDR78Q5VTH9 848 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms