RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 PPP1R16BQ96T49 567 aa14.85□□□□□ -0.03
TPM1-215ENST00000558868 NAPGQ99747 312 aaPredicted RBP14.85□□□□□ -0.03
TPM1-215ENST00000558868 ASB7Q9H672 318 aa14.85□□□□□ -0.03
TPM1-215ENST00000558868 XPNPEP3Q9NQH7 507 aa14.85□□□□□ -0.03
TPM1-215ENST00000558868 HDAC6Q9UBN7 1215 aa14.85□□□□□ -0.03
TPM1-215ENST00000558868 A0A0U1RQJ8 604 aa14.84□□□□□ -0.03
TPM1-215ENST00000558868 BTNL10A8MVZ5 291 aa14.84□□□□□ -0.03
TPM1-215ENST00000558868 GPR25O00155 361 aa14.84□□□□□ -0.03
TPM1-215ENST00000558868 LRRN2O75325 713 aa14.84□□□□□ -0.03
TPM1-215ENST00000558868 URI1O94763 535 aaPredicted RBP14.84□□□□□ -0.03
TPM1-215ENST00000558868 STAG3L1P0CL83 205 aa14.84□□□□□ -0.03
TPM1-215ENST00000558868 PRKAR2AP13861 404 aaKnown RBP14.84□□□□□ -0.03
TPM1-215ENST00000558868 DARSP14868 501 aaKnown RBP14.84□□□□□ -0.03
TPM1-215ENST00000558868 CST5P28325 142 aaPredicted RBP14.84□□□□□ -0.03
TPM1-215ENST00000558868 CRYBB1P53674 252 aaPredicted RBP14.84□□□□□ -0.03
TPM1-215ENST00000558868 TRPC3Q13507 836 aa14.84□□□□□ -0.03
TPM1-215ENST00000558868 NCOA4Q13772 614 aa14.84□□□□□ -0.03
TPM1-215ENST00000558868 IFI16Q16666 785 aaKnown RBP14.84□□□□□ -0.03
TPM1-215ENST00000558868 SEZ6Q53EL9 994 aa14.84□□□□□ -0.03
TPM1-215ENST00000558868 ALKBH5Q6P6C2 394 aaKnown RBP14.84□□□□□ -0.03
TPM1-215ENST00000558868 NT5DC4Q86YG4 428 aa14.84□□□□□ -0.03
TPM1-215ENST00000558868 GPIHBP1Q8IV16 184 aa14.84□□□□□ -0.03
TPM1-215ENST00000558868 SLC35F6Q8N357 371 aa14.84□□□□□ -0.03
TPM1-215ENST00000558868 PCSK9Q8NBP7 692 aaKnown RBP14.84□□□□□ -0.03
TPM1-215ENST00000558868 TRIM58Q8NG06 486 aa14.84□□□□□ -0.03
TPM1-215ENST00000558868 CD99L2Q8TCZ2 262 aa14.84□□□□□ -0.03
TPM1-215ENST00000558868 PXYLP1Q8TE99 480 aa14.84□□□□□ -0.03
TPM1-215ENST00000558868 DNAJB3Q8WWF6 145 aa14.84□□□□□ -0.03
TPM1-215ENST00000558868 ATRIPQ8WXE1 791 aa14.84□□□□□ -0.03
TPM1-215ENST00000558868 TAF4BQ92750 862 aa14.84□□□□□ -0.03
TPM1-215ENST00000558868 FAM212AQ96EL1 285 aa14.84□□□□□ -0.03
TPM1-215ENST00000558868 KREMEN1Q96MU8 473 aa14.84□□□□□ -0.03
TPM1-215ENST00000558868 AGPAT1Q99943 283 aa14.84□□□□□ -0.03
TPM1-215ENST00000558868 MCOLN1Q9GZU1 580 aa14.84□□□□□ -0.03
TPM1-215ENST00000558868 LACRTQ9GZZ8 138 aa14.84□□□□□ -0.03
TPM1-215ENST00000558868 L2HGDHQ9H9P8 463 aa14.84□□□□□ -0.03
TPM1-215ENST00000558868 NAGPAQ9UK23 515 aa14.84□□□□□ -0.03
TPM1-215ENST00000558868 M0QZ92 97 aa14.83□□□□□ -0.04
TPM1-215ENST00000558868 TREHO43280 583 aa14.83□□□□□ -0.04
TPM1-215ENST00000558868 CABYRO75952 493 aa14.83□□□□□ -0.04
TPM1-215ENST00000558868 VNN1O95497 513 aa14.83□□□□□ -0.04
TPM1-215ENST00000558868 EIF4BP23588 611 aaKnown RBP14.83□□□□□ -0.04
TPM1-215ENST00000558868 USP8P40818 1118 aa14.83□□□□□ -0.04
TPM1-215ENST00000558868 WNT7BP56706 349 aa14.83□□□□□ -0.04
TPM1-215ENST00000558868 IRX5P78411 483 aaPredicted RBP14.83□□□□□ -0.04
TPM1-215ENST00000558868 SGSM1Q2NKQ1 1148 aa14.83□□□□□ -0.04
TPM1-215ENST00000558868 LMBRD2Q68DH5 695 aaPredicted RBP14.83□□□□□ -0.04
TPM1-215ENST00000558868 NOTUMQ6P988 496 aa14.83□□□□□ -0.04
TPM1-215ENST00000558868 RUFY4Q6ZNE9 571 aa14.83□□□□□ -0.04
TPM1-215ENST00000558868 TRAPPC11Q7Z392 1133 aa14.83□□□□□ -0.04
TPM1-215ENST00000558868 OR5B17Q8NGF7 314 aa14.83□□□□□ -0.04
TPM1-215ENST00000558868 FAXDC2Q96IV6 333 aa14.83□□□□□ -0.04
TPM1-215ENST00000558868 CPB2Q96IY4 423 aa14.83□□□□□ -0.04
TPM1-215ENST00000558868 ACAP3Q96P50 834 aa14.83□□□□□ -0.04
TPM1-215ENST00000558868 NOX5Q96PH1 765 aa14.83□□□□□ -0.04
TPM1-215ENST00000558868 CCDC94Q9BW85 323 aaPredicted RBP14.83□□□□□ -0.04
TPM1-215ENST00000558868 SAGE1Q9NXZ1 904 aa14.83□□□□□ -0.04
TPM1-215ENST00000558868 PTPRJQ12913 1337 aa14.83□□□□□ -0.04
TPM1-215ENST00000558868 UQCRHLA0A096LP55 91 aa14.82□□□□□ -0.04
TPM1-215ENST00000558868 ANO9A1A5B4 782 aa14.82□□□□□ -0.04
TPM1-215ENST00000558868 MYADML2A6NDP7 307 aa14.82□□□□□ -0.04
TPM1-215ENST00000558868 RCCD1A6NED2 376 aa14.82□□□□□ -0.04
TPM1-215ENST00000558868 DDX3XO00571 662 aaKnown RBP eCLIP14.82□□□□□ -0.042e-8■■■■□ 19.9
TPM1-215ENST00000558868 FKTNO75072 461 aa14.82□□□□□ -0.04
TPM1-215ENST00000558868 ADAMTS4O75173 837 aa14.82□□□□□ -0.04
TPM1-215ENST00000558868 CSDE1O75534 798 aaKnown RBP14.82□□□□□ -0.04
TPM1-215ENST00000558868 PGK1P00558 417 aa14.82□□□□□ -0.04
TPM1-215ENST00000558868 UQCRHP07919 91 aa14.82□□□□□ -0.04
TPM1-215ENST00000558868 H2AFZP0C0S5 128 aa14.82□□□□□ -0.04
TPM1-215ENST00000558868 PNMA6AP0CW24 399 aaPredicted RBP14.82□□□□□ -0.04
TPM1-215ENST00000558868 ELNP15502 786 aa14.82□□□□□ -0.04
TPM1-215ENST00000558868 GTF2F1P35269 517 aaKnown RBP eCLIP14.82□□□□□ -0.04
TPM1-215ENST00000558868 GRM5P41594 1212 aa14.82□□□□□ -0.04
TPM1-215ENST00000558868 TFAMQ00059 246 aaKnown RBP14.82□□□□□ -0.04
TPM1-215ENST00000558868 NBPF20Q3BBV1 942 aa14.82□□□□□ -0.04
TPM1-215ENST00000558868 MAP3K21Q5TCX8 1036 aa14.82□□□□□ -0.04
TPM1-215ENST00000558868 SLC27A1Q6PCB7 646 aa14.82□□□□□ -0.04
TPM1-215ENST00000558868 CXCL17Q6UXB2 119 aa14.82□□□□□ -0.04
TPM1-215ENST00000558868 H2AFVQ71UI9 128 aa14.82□□□□□ -0.04
TPM1-215ENST00000558868 RNF180Q86T96 592 aa14.82□□□□□ -0.04
TPM1-215ENST00000558868 SESTD1Q86VW0 696 aa14.82□□□□□ -0.04
TPM1-215ENST00000558868 KLHDC9Q8NEP7 349 aa14.82□□□□□ -0.04
TPM1-215ENST00000558868 SLC30A5Q8TAD4 765 aa14.82□□□□□ -0.04
TPM1-215ENST00000558868 U2AF1L4Q8WU68 220 aaKnown RBP14.82□□□□□ -0.04
TPM1-215ENST00000558868 TATDN2Q93075 761 aa14.82□□□□□ -0.04
TPM1-215ENST00000558868 CALR3Q96L12 384 aaKnown RBP14.82□□□□□ -0.04
TPM1-215ENST00000558868 SYT11Q9BT88 431 aa14.82□□□□□ -0.04
TPM1-215ENST00000558868 IRX2Q9BZI1 471 aaPredicted RBP14.82□□□□□ -0.04
TPM1-215ENST00000558868 PLEKHA5Q9HAU0 1116 aa14.82□□□□□ -0.04
TPM1-215ENST00000558868 TRIM10Q9UDY6 481 aa14.82□□□□□ -0.04
TPM1-215ENST00000558868 GTF2IRD1Q9UHL9 959 aa14.82□□□□□ -0.04
TPM1-215ENST00000558868 NENFQ9UMX5 172 aa14.82□□□□□ -0.04
TPM1-215ENST00000558868 GINS2Q9Y248 185 aa14.82□□□□□ -0.04
TPM1-215ENST00000558868 A0A0A6YYK5 440 aaPredicted RBP14.81□□□□□ -0.04
TPM1-215ENST00000558868 MACROD2A1Z1Q3 448 aa14.81□□□□□ -0.04
TPM1-215ENST00000558868 CLSTN1O94985 981 aa14.81□□□□□ -0.04
TPM1-215ENST00000558868 SLU7O95391 586 aaKnown RBP14.81□□□□□ -0.04
TPM1-215ENST00000558868 ASS1P00966 412 aaKnown RBP14.81□□□□□ -0.04
TPM1-215ENST00000558868 CXCL8P10145 99 aa14.81□□□□□ -0.04
TPM1-215ENST00000558868 KRT5P13647 590 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms