RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 MPZL3Q6UWV2 235 aa10.33□□□□□ -0.76
NUP50-215ENST00000484186 TMEM161BQ8NDZ6 487 aa10.33□□□□□ -0.76
NUP50-215ENST00000484186 NXPE3Q969Y0 559 aa10.33□□□□□ -0.76
NUP50-215ENST00000484186 DDX27Q96GQ7 796 aaKnown RBP10.33□□□□□ -0.76
NUP50-215ENST00000484186 ZMAT2Q96NC0 199 aaKnown RBP10.33□□□□□ -0.76
NUP50-215ENST00000484186 IRF2BPLQ9H1B7 796 aa10.33□□□□□ -0.76
NUP50-215ENST00000484186 MFSD1Q9H3U5 465 aa10.33□□□□□ -0.76
NUP50-215ENST00000484186 SLC38A7Q9NVC3 462 aa10.33□□□□□ -0.76
NUP50-215ENST00000484186 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.33□□□□□ -0.764e-8■■■■■ 51.6
NUP50-215ENST00000484186 DUSP12Q9UNI6 340 aa10.33□□□□□ -0.76
NUP50-215ENST00000484186 C2orf16Q68DN1 1984 aa10.33□□□□□ -0.76
NUP50-215ENST00000484186 MTCL1Q9Y4B5 1905 aaKnown RBP10.33□□□□□ -0.76
NUP50-215ENST00000484186 NPHP3-ACAD11A0A0J9YXS1 232 aa10.32□□□□□ -0.76
NUP50-215ENST00000484186 H0YCG3 227 aa10.32□□□□□ -0.76
NUP50-215ENST00000484186 PODXLO00592 558 aa10.32□□□□□ -0.76
NUP50-215ENST00000484186 ADAM12O43184 909 aa10.32□□□□□ -0.76
NUP50-215ENST00000484186 BMP15O95972 392 aa10.32□□□□□ -0.76
NUP50-215ENST00000484186 C8AP07357 584 aa10.32□□□□□ -0.76
NUP50-215ENST00000484186 MAPTP10636 758 aaKnown RBP10.32□□□□□ -0.76
NUP50-215ENST00000484186 LAMP2P13473 410 aa10.32□□□□□ -0.76
NUP50-215ENST00000484186 KCNE1P15382 129 aa10.32□□□□□ -0.76
NUP50-215ENST00000484186 TKTP29401 623 aaKnown RBP10.32□□□□□ -0.76
NUP50-215ENST00000484186 UBA7P41226 1012 aa10.32□□□□□ -0.76
NUP50-215ENST00000484186 BRCC3P46736 316 aa10.32□□□□□ -0.76
NUP50-215ENST00000484186 CLCN5P51795 746 aa10.32□□□□□ -0.76
NUP50-215ENST00000484186 SOX4Q06945 474 aaPredicted RBP10.32□□□□□ -0.76
NUP50-215ENST00000484186 UVSSAQ2YD98 709 aa10.32□□□□□ -0.76
NUP50-215ENST00000484186 ARSHQ5FYA8 562 aa10.32□□□□□ -0.76
NUP50-215ENST00000484186 PPM1LQ5SGD2 360 aa10.32□□□□□ -0.76
NUP50-215ENST00000484186 ASTLQ6HA08 431 aaPredicted RBP10.32□□□□□ -0.76
NUP50-215ENST00000484186 ZPBP2Q6X784 338 aa10.32□□□□□ -0.76
NUP50-215ENST00000484186 ANKS3Q6ZW76 656 aa10.32□□□□□ -0.76
NUP50-215ENST00000484186 BRAPQ7Z569 592 aa10.32□□□□□ -0.76
NUP50-215ENST00000484186 SLC44A3Q8N4M1 653 aa10.32□□□□□ -0.76
NUP50-215ENST00000484186 C3orf58Q8NDZ4 430 aa10.32□□□□□ -0.76
NUP50-215ENST00000484186 RSAD2Q8WXG1 361 aa10.32□□□□□ -0.76
NUP50-215ENST00000484186 CALML4Q96GE6 196 aa10.32□□□□□ -0.76
NUP50-215ENST00000484186 SNX27Q96L92 541 aa10.32□□□□□ -0.76
NUP50-215ENST00000484186 CNTN3Q9P232 1028 aa10.32□□□□□ -0.76
NUP50-215ENST00000484186 LARSQ9P2J5 1176 aaKnown RBP10.32□□□□□ -0.76
NUP50-215ENST00000484186 MTRRQ9UBK8 725 aa10.32□□□□□ -0.76
NUP50-215ENST00000484186 BACE2Q9Y5Z0 518 aa10.32□□□□□ -0.76
NUP50-215ENST00000484186 ZDBF2Q9HCK1 2354 aa10.32□□□□□ -0.76
NUP50-215ENST00000484186 I3L4J1 428 aa10.31□□□□□ -0.76
NUP50-215ENST00000484186 CLDN3O15551 220 aa10.31□□□□□ -0.76
NUP50-215ENST00000484186 GALR2O43603 387 aaPredicted RBP10.31□□□□□ -0.76
NUP50-215ENST00000484186 NARSO43776 548 aaKnown RBP10.31□□□□□ -0.76
NUP50-215ENST00000484186 XYLBO75191 536 aa10.31□□□□□ -0.76
NUP50-215ENST00000484186 HARSP12081 509 aaKnown RBP10.31□□□□□ -0.76
NUP50-215ENST00000484186 FSHRP23945 695 aa10.31□□□□□ -0.76
NUP50-215ENST00000484186 HOXA9P31269 272 aa10.31□□□□□ -0.76
NUP50-215ENST00000484186 RPL9P32969 192 aaKnown RBP10.31□□□□□ -0.76
NUP50-215ENST00000484186 LONP1P36776 959 aaKnown RBP10.31□□□□□ -0.76
NUP50-215ENST00000484186 NCKAP1LP55160 1127 aa10.31□□□□□ -0.76
NUP50-215ENST00000484186 CACNB1Q02641 598 aaPredicted RBP10.31□□□□□ -0.76
NUP50-215ENST00000484186 MCL1Q07820 350 aa10.31□□□□□ -0.76
NUP50-215ENST00000484186 CUL4AQ13619 759 aa10.31□□□□□ -0.76
NUP50-215ENST00000484186 NOLC1Q14978 699 aaKnown RBP eCLIP10.31□□□□□ -0.76
NUP50-215ENST00000484186 SF3A1Q15459 793 aaKnown RBP10.31□□□□□ -0.76
NUP50-215ENST00000484186 SLC10A6Q3KNW5 377 aa10.31□□□□□ -0.76
NUP50-215ENST00000484186 AXDND1Q5T1B0 1012 aaPredicted RBP10.31□□□□□ -0.76
NUP50-215ENST00000484186 RSPO2Q6UXX9 243 aaPredicted RBP10.31□□□□□ -0.76
NUP50-215ENST00000484186 RTL10Q7L3V2 364 aa10.31□□□□□ -0.76
NUP50-215ENST00000484186 GET4Q7L5D6 327 aaPredicted RBP10.31□□□□□ -0.76
NUP50-215ENST00000484186 HAUS6Q7Z4H7 955 aa10.31□□□□□ -0.76
NUP50-215ENST00000484186 GRASPQ7Z6J2 395 aaPredicted RBP10.31□□□□□ -0.76
NUP50-215ENST00000484186 TMEM105Q8N8V8 129 aa10.31□□□□□ -0.76
NUP50-215ENST00000484186 FLCNQ8NFG4 579 aa10.31□□□□□ -0.76
NUP50-215ENST00000484186 KCNN1Q92952 543 aa10.31□□□□□ -0.76
NUP50-215ENST00000484186 PHOX2BQ99453 314 aa10.31□□□□□ -0.76
NUP50-215ENST00000484186 ANKFY1Q9P2R3 1169 aa10.31□□□□□ -0.76
NUP50-215ENST00000484186 WNT16Q9UBV4 365 aa10.31□□□□□ -0.76
NUP50-215ENST00000484186 FBXL21Q9UKT6 434 aa10.31□□□□□ -0.76
NUP50-215ENST00000484186 ODF2LQ9ULJ1 636 aa10.31□□□□□ -0.76
NUP50-215ENST00000484186 CDY1Q9Y6F8 540 aa10.31□□□□□ -0.76
NUP50-215ENST00000484186 ZFP37Q9Y6Q3 630 aaPredicted RBP10.31□□□□□ -0.76
NUP50-215ENST00000484186 KMT2EQ8IZD2 1858 aa10.31□□□□□ -0.76
NUP50-215ENST00000484186 ANHXE9PGG2 379 aa10.3□□□□□ -0.76
NUP50-215ENST00000484186 SYN3O14994 580 aa10.3□□□□□ -0.76
NUP50-215ENST00000484186 CCL16O15467 120 aa10.3□□□□□ -0.76
NUP50-215ENST00000484186 MEFVO15553 781 aaPredicted RBP10.3□□□□□ -0.76
NUP50-215ENST00000484186 POU2F2P09086 479 aa10.3□□□□□ -0.76
NUP50-215ENST00000484186 NPR3P17342 541 aa10.3□□□□□ -0.76
NUP50-215ENST00000484186 SCP2P22307 547 aa10.3□□□□□ -0.76
NUP50-215ENST00000484186 MATR3P43243 847 aaKnown RBP eCLIP10.3□□□□□ -0.76
NUP50-215ENST00000484186 NTHL1P78549 312 aa10.3□□□□□ -0.76
NUP50-215ENST00000484186 GRIN1Q05586 938 aa10.3□□□□□ -0.76
NUP50-215ENST00000484186 DHX8Q14562 1220 aaKnown RBP10.3□□□□□ -0.76
NUP50-215ENST00000484186 MCM6Q14566 821 aa10.3□□□□□ -0.76
NUP50-215ENST00000484186 SEZ6Q53EL9 994 aa10.3□□□□□ -0.76
NUP50-215ENST00000484186 GPBP1Q86WP2 473 aa10.3□□□□□ -0.76
NUP50-215ENST00000484186 SIX5Q8N196 739 aa10.3□□□□□ -0.76
NUP50-215ENST00000484186 MYCT1Q8N699 235 aa10.3□□□□□ -0.76
NUP50-215ENST00000484186 SLC7A14Q8TBB6 771 aa10.3□□□□□ -0.76
NUP50-215ENST00000484186 LRRC15Q8TF66 581 aa10.3□□□□□ -0.76
NUP50-215ENST00000484186 ATOH1Q92858 354 aaPredicted RBP10.3□□□□□ -0.76
NUP50-215ENST00000484186 C18orf25Q96B23 403 aaPredicted RBP10.3□□□□□ -0.76
NUP50-215ENST00000484186 BICD1Q96G01 975 aa10.3□□□□□ -0.76
NUP50-215ENST00000484186 HAPLN2Q9GZV7 340 aa10.3□□□□□ -0.76
NUP50-215ENST00000484186 PLEKHA5Q9HAU0 1116 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms