RNA–Protein interactions for RNA: ENST00000478085.5

SGSM3-209, Transcript of small G protein signaling modulator 3, humanhuman

TSL 2

Gene SGSM3, Length 4,218 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-209ENST00000478085 MKRN4PQ13434 485 aaPredicted RBP12.61□□□□□ -0.39
SGSM3-209ENST00000478085 UGCGQ16739 394 aa12.61□□□□□ -0.39
SGSM3-209ENST00000478085 KYAT1Q16773 422 aa12.61□□□□□ -0.39
SGSM3-209ENST00000478085 TRIM72Q6ZMU5 477 aa12.61□□□□□ -0.39
SGSM3-209ENST00000478085 SPATA4Q8NEY3 305 aa12.61□□□□□ -0.39
SGSM3-209ENST00000478085 NIF3L1Q9GZT8 377 aa12.61□□□□□ -0.39
SGSM3-209ENST00000478085 SNX12Q9UMY4 172 aa12.61□□□□□ -0.39
SGSM3-209ENST00000478085 ANKRD63C9JTQ0 380 aa12.61□□□□□ -0.39
SGSM3-209ENST00000478085 CCDC188H7C350 402 aa12.61□□□□□ -0.39
SGSM3-209ENST00000478085 P4HA2O15460 535 aa12.61□□□□□ -0.39
SGSM3-209ENST00000478085 SGPL1O95470 568 aa12.61□□□□□ -0.39
SGSM3-209ENST00000478085 HSD17B4P51659 736 aa12.61□□□□□ -0.39
SGSM3-209ENST00000478085 RWDD4Q6NW29 188 aaKnown RBP12.61□□□□□ -0.39
SGSM3-209ENST00000478085 UBA3Q8TBC4 463 aa12.61□□□□□ -0.39
SGSM3-209ENST00000478085 SENP7Q9BQF6 1050 aa12.61□□□□□ -0.39
SGSM3-209ENST00000478085 RNF19AQ9NV58 838 aa12.61□□□□□ -0.39
SGSM3-209ENST00000478085 BTBD7Q9P203 1132 aa12.61□□□□□ -0.39
SGSM3-209ENST00000478085 TTC7AQ9ULT0 858 aaPredicted RBP12.61□□□□□ -0.39
SGSM3-209ENST00000478085 AFG3L2Q9Y4W6 797 aa12.61□□□□□ -0.39
SGSM3-209ENST00000478085 PLCB4Q15147 1175 aa12.61□□□□□ -0.39
SGSM3-209ENST00000478085 GRIK4Q16099 956 aa12.61□□□□□ -0.39
SGSM3-209ENST00000478085 ARSHQ5FYA8 562 aa12.61□□□□□ -0.39
SGSM3-209ENST00000478085 MPZL3Q6UWV2 235 aa12.61□□□□□ -0.39
SGSM3-209ENST00000478085 TLK2Q86UE8 772 aa12.61□□□□□ -0.39
SGSM3-209ENST00000478085 PORCNQ9H237 461 aa12.61□□□□□ -0.39
SGSM3-209ENST00000478085 VTA1Q9NP79 307 aa12.61□□□□□ -0.39
SGSM3-209ENST00000478085 NMRK2Q9NPI5 230 aa12.61□□□□□ -0.39
SGSM3-209ENST00000478085 ASNSD1Q9NWL6 643 aa12.61□□□□□ -0.39
SGSM3-209ENST00000478085 MRFAP1Q9Y605 127 aa12.61□□□□□ -0.39
SGSM3-209ENST00000478085 STAG3L1P0CL83 205 aa12.6□□□□□ -0.39
SGSM3-209ENST00000478085 CXCL8P10145 99 aa12.6□□□□□ -0.39
SGSM3-209ENST00000478085 BRD2P25440 801 aaKnown RBP12.6□□□□□ -0.39
SGSM3-209ENST00000478085 HSDL1Q3SXM5 330 aa12.6□□□□□ -0.39
SGSM3-209ENST00000478085 GPAT2Q6NUI2 795 aa12.6□□□□□ -0.39
SGSM3-209ENST00000478085 APPL2Q8NEU8 664 aa12.6□□□□□ -0.39
SGSM3-209ENST00000478085 URGCPQ8TCY9 931 aa12.6□□□□□ -0.39
SGSM3-209ENST00000478085 TATDN2Q93075 761 aa12.6□□□□□ -0.39
SGSM3-209ENST00000478085 WNK4Q96J92 1243 aa12.6□□□□□ -0.39
SGSM3-209ENST00000478085 TNIP3Q96KP6 325 aa12.6□□□□□ -0.39
SGSM3-209ENST00000478085 DNAJC7Q99615 494 aa12.6□□□□□ -0.39
SGSM3-209ENST00000478085 PARVAQ9NVD7 372 aa12.6□□□□□ -0.39
SGSM3-209ENST00000478085 C5P01031 1676 aa12.6□□□□□ -0.39
SGSM3-209ENST00000478085 NME3Q13232 169 aa12.6□□□□□ -0.39
SGSM3-209ENST00000478085 PAN2Q504Q3 1202 aaKnown RBP12.6□□□□□ -0.39
SGSM3-209ENST00000478085 TTC19Q6DKK2 380 aaPredicted RBP12.6□□□□□ -0.39
SGSM3-209ENST00000478085 CHADLQ6NUI6 762 aa12.6□□□□□ -0.39
SGSM3-209ENST00000478085 RGMBQ6NW40 437 aa12.6□□□□□ -0.39
SGSM3-209ENST00000478085 TAOK1Q7L7X3 1001 aa12.6□□□□□ -0.39
SGSM3-209ENST00000478085 C1orf54Q8WWF1 131 aa12.6□□□□□ -0.39
SGSM3-209ENST00000478085 FMO2Q99518 471 aa12.6□□□□□ -0.39
SGSM3-209ENST00000478085 PACSIN1Q9BY11 444 aa12.6□□□□□ -0.39
SGSM3-209ENST00000478085 AMACRQ9UHK6 382 aa12.6□□□□□ -0.39
SGSM3-209ENST00000478085 SYNGAP1Q96PV0 1343 aa12.6□□□□□ -0.39
SGSM3-209ENST00000478085 BTBD19C9JJ37 291 aa12.6□□□□□ -0.39
SGSM3-209ENST00000478085 ADCY3O60266 1144 aa12.6□□□□□ -0.39
SGSM3-209ENST00000478085 TJP3O95049 919 aa12.6□□□□□ -0.39
SGSM3-209ENST00000478085 IL18RAPO95256 599 aa12.6□□□□□ -0.39
SGSM3-209ENST00000478085 MAN1A1P33908 653 aa12.6□□□□□ -0.39
SGSM3-209ENST00000478085 ATN1P54259 1190 aaPredicted RBP12.6□□□□□ -0.39
SGSM3-209ENST00000478085 MYL6P60660 151 aa12.6□□□□□ -0.39
SGSM3-209ENST00000478085 CYP24A1Q07973 514 aa12.6□□□□□ -0.39
SGSM3-209ENST00000478085 LGSNQ5TDP6 509 aa12.6□□□□□ -0.39
SGSM3-209ENST00000478085 TRAPPC11Q7Z392 1133 aa12.6□□□□□ -0.39
SGSM3-209ENST00000478085 ANKS4BQ8N8V4 417 aa12.6□□□□□ -0.39
SGSM3-209ENST00000478085 RNPC3Q96LT9 517 aaKnown RBP12.6□□□□□ -0.39
SGSM3-209ENST00000478085 INPP4AQ96PE3 977 aaPredicted RBP12.6□□□□□ -0.39
SGSM3-209ENST00000478085 SAMD15Q9P1V8 674 aa12.6□□□□□ -0.39
SGSM3-209ENST00000478085 VAV3Q9UKW4 847 aa12.6□□□□□ -0.39
SGSM3-209ENST00000478085 PRG3Q9Y2Y8 225 aaPredicted RBP12.6□□□□□ -0.39
SGSM3-209ENST00000478085 SNCAIPQ9Y6H5 919 aa12.6□□□□□ -0.39
SGSM3-209ENST00000478085 LGALS2P05162 132 aa12.59□□□□□ -0.39
SGSM3-209ENST00000478085 GTF2A1P52655 376 aaPredicted RBP12.59□□□□□ -0.39
SGSM3-209ENST00000478085 BBS9Q3SYG4 887 aa12.59□□□□□ -0.39
SGSM3-209ENST00000478085 CELF3Q5SZQ8 465 aaKnown RBP12.59□□□□□ -0.39
SGSM3-209ENST00000478085 HHATQ5VTY9 493 aa12.59□□□□□ -0.39
SGSM3-209ENST00000478085 ANO5Q75V66 913 aa12.59□□□□□ -0.39
SGSM3-209ENST00000478085 RHOT1Q8IXI2 618 aa12.59□□□□□ -0.39
SGSM3-209ENST00000478085 DNAAF3Q8N9W5 541 aa12.59□□□□□ -0.39
SGSM3-209ENST00000478085 BBOF1Q8ND07 529 aa12.59□□□□□ -0.39
SGSM3-209ENST00000478085 NT5C1AQ9BXI3 368 aa12.59□□□□□ -0.39
SGSM3-209ENST00000478085 TMEM117Q9H0C3 514 aa12.59□□□□□ -0.39
SGSM3-209ENST00000478085 SIK2Q9H0K1 926 aa12.59□□□□□ -0.39
SGSM3-209ENST00000478085 RGS17Q9UGC6 210 aaPredicted RBP12.59□□□□□ -0.39
SGSM3-209ENST00000478085 MYPNQ86TC9 1320 aa12.59□□□□□ -0.39
SGSM3-209ENST00000478085 LRRC10BA6NIK2 292 aa12.59□□□□□ -0.39
SGSM3-209ENST00000478085 SPATA31C2B4DYI2 1134 aa12.59□□□□□ -0.39
SGSM3-209ENST00000478085 CREB3O43889 395 aa12.59□□□□□ -0.39
SGSM3-209ENST00000478085 ZBED1O96006 694 aa12.59□□□□□ -0.39
SGSM3-209ENST00000478085 CCNE2O96020 404 aa12.59□□□□□ -0.39
SGSM3-209ENST00000478085 GJB1P08034 283 aa12.59□□□□□ -0.39
SGSM3-209ENST00000478085 PDGFRAP16234 1089 aa12.59□□□□□ -0.39
SGSM3-209ENST00000478085 SAT1P21673 171 aa12.59□□□□□ -0.39
SGSM3-209ENST00000478085 CUL2Q13617 745 aa12.59□□□□□ -0.39
SGSM3-209ENST00000478085 CASP8Q14790 479 aa12.59□□□□□ -0.39
SGSM3-209ENST00000478085 GPR142Q7Z601 462 aa12.59□□□□□ -0.39
SGSM3-209ENST00000478085 CROCCP2Q86T23 111 aa12.59□□□□□ -0.39
SGSM3-209ENST00000478085 THAP2Q9H0W7 228 aa12.59□□□□□ -0.39
SGSM3-209ENST00000478085 IP6K2Q9UHH9 426 aa12.59□□□□□ -0.39
SGSM3-209ENST00000478085 ALG6Q9Y672 507 aa12.59□□□□□ -0.39
SGSM3-209ENST00000478085 ATRNL1Q5VV63 1379 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms