RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 C19orf57Q0VDD7 668 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 TFCP2Q12800 502 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 ADAM15Q13444 863 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 SNAPC2Q13487 334 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 MAMLD1Q13495 774 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 ACVR2BQ13705 512 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 TNIP1Q15025 636 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 EZH2Q15910 746 aaKnown RBP3.19□□□□□ -1.9
HMGN4-202ENST00000477243 ASIC2Q16515 512 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 TIGD6Q17RP2 521 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.19□□□□□ -1.9
HMGN4-202ENST00000477243 UVSSAQ2YD98 709 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 ZBTB37Q5TC79 503 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 ZNF697Q5TEC3 545 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 CWF19L1Q69YN2 538 aaKnown RBP3.19□□□□□ -1.9
HMGN4-202ENST00000477243 MCTP2Q6DN12 878 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 ACAD10Q6JQN1 1059 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 RPUSD3Q6P087 351 aaKnown RBP3.19□□□□□ -1.9
HMGN4-202ENST00000477243 KLHDC10Q6PID8 442 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 TMTC3Q6ZXV5 915 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 MCM10Q7L590 875 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 TMC6Q7Z403 805 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 TTC7BQ86TV6 843 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 TTC30AQ86WT1 665 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 RIOX2Q8IUF8 465 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 CPOQ8IVL8 374 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 SIRT2Q8IXJ6 389 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 RTKN2Q8IZC4 609 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 OR8H3Q8N146 312 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 CISD2Q8N5K1 135 aaKnown RBP3.19□□□□□ -1.9
HMGN4-202ENST00000477243 GOT1L1Q8NHS2 421 aaPredicted RBP3.19□□□□□ -1.9
HMGN4-202ENST00000477243 GSDMBQ8TAX9 411 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 FAM71BQ8TC56 605 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 OTUD7AQ8TE49 926 aaPredicted RBP3.19□□□□□ -1.9
HMGN4-202ENST00000477243 RSAD2Q8WXG1 361 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 ST8SIA4Q92187 359 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 HDAC10Q969S8 669 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 EID2BQ96D98 161 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 FAM167AQ96KS9 214 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 FBXL18Q96ME1 805 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 KCNC2Q96PR1 638 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 SLC2A13Q96QE2 648 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 GPATCH1Q9BRR8 931 aaKnown RBP3.19□□□□□ -1.9
HMGN4-202ENST00000477243 DESI2Q9BSY9 194 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 PI4K2AQ9BTU6 479 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 DDX23Q9BUQ8 820 aaKnown RBP3.19□□□□□ -1.9
HMGN4-202ENST00000477243 DSCC1Q9BVC3 393 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 QRSL1Q9H0R6 528 aaKnown RBP3.19□□□□□ -1.9
HMGN4-202ENST00000477243 SIL1Q9H173 461 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 RABEP2Q9H5N1 569 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 EPS8L2Q9H6S3 715 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 GPAMQ9HCL2 828 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 TMEM8AQ9HCN3 771 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 SEPSECSQ9HD40 501 aaKnown RBP3.19□□□□□ -1.9
HMGN4-202ENST00000477243 CCDC177Q9NQR7 707 aaPredicted RBP3.19□□□□□ -1.9
HMGN4-202ENST00000477243 EIF2B3Q9NR50 452 aaKnown RBP3.19□□□□□ -1.9
HMGN4-202ENST00000477243 CNNM1Q9NRU3 951 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 KCND1Q9NSA2 647 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 COMMD8Q9NX08 183 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 TMOD4Q9NZQ9 345 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 CEP72Q9P209 647 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 DKK3Q9UBP4 350 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 SRP68Q9UHB9 627 aaKnown RBP3.19□□□□□ -1.9
HMGN4-202ENST00000477243 TBK1Q9UHD2 729 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 CTNNA3Q9UI47 895 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 MSRAQ9UJ68 235 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 MOSPD1Q9UJG1 213 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 RPS6KA6Q9UK32 745 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 MTF2Q9Y483 593 aaPredicted RBP3.19□□□□□ -1.9
HMGN4-202ENST00000477243 DAGLAQ9Y4D2 1042 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 NR2E3Q9Y5X4 410 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 CSADQ9Y600 493 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 ATP23Q9Y6H3 246 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 ZFP37Q9Y6Q3 630 aaPredicted RBP3.19□□□□□ -1.9
HMGN4-202ENST00000477243 ATP10BO94823 1461 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 ANKHD1Q8IWZ3 2542 aaKnown RBP3.19□□□□□ -1.9
HMGN4-202ENST00000477243 HECW1Q76N89 1606 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 PRAG1Q86YV5 1406 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 CNTLNQ9NXG0 1405 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 FLT1P17948 1338 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 DCHS1Q96JQ0 3298 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 ABCA8O94911 1581 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 IGSF10Q6WRI0 2623 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 PTPRZ1P23471 2315 aaPredicted RBP3.18□□□□□ -1.9
HMGN4-202ENST00000477243 TMEM94Q12767 1356 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 C2orf71A6NGG8 1288 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 LRRC14BA6NHZ5 514 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 CCDC154A6NI56 674 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 CCDC69A6NI79 296 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 PLOD2O00469 737 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 AP3D1O14617 1153 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 MTSS1O43312 755 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 THAP12O43422 761 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 HTRA2O43464 458 aaPredicted RBP3.18□□□□□ -1.9
HMGN4-202ENST00000477243 MYO1BO43795 1136 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 LUC7L3O95232 432 aaKnown RBP3.18□□□□□ -1.9
HMGN4-202ENST00000477243 TGDSO95455 350 aa3.18□□□□□ -1.9
HMGN4-202ENST00000477243 CST3P01034 146 aaPredicted RBP3.18□□□□□ -1.9
HMGN4-202ENST00000477243 FTLP02792 175 aaPredicted RBP3.18□□□□□ -1.9
HMGN4-202ENST00000477243 THBDP07204 575 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms