RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 CCDC62Q6P9F0 684 aa9.7□□□□□ -0.86
TDP1-202ENST00000393452 FASTKD5Q7L8L6 764 aaKnown RBP9.7□□□□□ -0.86
TDP1-202ENST00000393452 CD302Q8IX05 232 aa9.7□□□□□ -0.86
TDP1-202ENST00000393452 ATP8B4Q8TF62 1192 aa9.7□□□□□ -0.86
TDP1-202ENST00000393452 PIK3R5Q8WYR1 880 aa9.7□□□□□ -0.86
TDP1-202ENST00000393452 ZIM3Q96PE6 472 aa9.7□□□□□ -0.86
TDP1-202ENST00000393452 AVENQ9NQS1 362 aaPredicted RBP9.7□□□□□ -0.86
TDP1-202ENST00000393452 ANKFY1Q9P2R3 1169 aa9.7□□□□□ -0.86
TDP1-202ENST00000393452 CHORDC1Q9UHD1 332 aaPredicted RBP9.7□□□□□ -0.86
TDP1-202ENST00000393452 CCDC66A2RUB6 948 aa9.7□□□□□ -0.86
TDP1-202ENST00000393452 TTI1O43156 1089 aa9.7□□□□□ -0.86
TDP1-202ENST00000393452 CYP1A1P04798 512 aaPredicted RBP9.7□□□□□ -0.86
TDP1-202ENST00000393452 YY1P25490 414 aa9.7□□□□□ -0.86
TDP1-202ENST00000393452 CTNNA2P26232 953 aa9.7□□□□□ -0.86
TDP1-202ENST00000393452 CTNNA1P35221 906 aaKnown RBP9.7□□□□□ -0.86
TDP1-202ENST00000393452 PIK3CAP42336 1068 aa9.7□□□□□ -0.86
TDP1-202ENST00000393452 PPFIA1Q13136 1202 aa9.7□□□□□ -0.86
TDP1-202ENST00000393452 ZNF211Q13398 564 aaPredicted RBP9.7□□□□□ -0.86
TDP1-202ENST00000393452 MXD4Q14582 209 aaPredicted RBP9.7□□□□□ -0.86
TDP1-202ENST00000393452 KCTD2Q14681 263 aa9.7□□□□□ -0.86
TDP1-202ENST00000393452 GPAT2Q6NUI2 795 aa9.7□□□□□ -0.86
TDP1-202ENST00000393452 BRSK2Q8IWQ3 736 aa9.7□□□□□ -0.86
TDP1-202ENST00000393452 EXOC8Q8IYI6 725 aa9.7□□□□□ -0.86
TDP1-202ENST00000393452 TCP11Q8WWU5 503 aa9.7□□□□□ -0.86
TDP1-202ENST00000393452 MROH8Q9H579 483 aa9.7□□□□□ -0.86
TDP1-202ENST00000393452 APOBEC3GQ9HC16 384 aaKnown RBP9.7□□□□□ -0.86
TDP1-202ENST00000393452 ERVK-5Q9HDB9 667 aa9.7□□□□□ -0.86
TDP1-202ENST00000393452 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.7□□□□□ -0.86
TDP1-202ENST00000393452 ZHX1Q9UKY1 873 aaPredicted RBP9.7□□□□□ -0.86
TDP1-202ENST00000393452 EVPLQ92817 2033 aa9.69□□□□□ -0.86
TDP1-202ENST00000393452 GOLGA6L10A0A0M3HER8 536 aa9.69□□□□□ -0.86
TDP1-202ENST00000393452 TTLL13PA6NNM8 815 aa9.69□□□□□ -0.86
TDP1-202ENST00000393452 GOLGA8KD6RF30 607 aa9.69□□□□□ -0.86
TDP1-202ENST00000393452 ABLIM1O14639 778 aa9.69□□□□□ -0.86
TDP1-202ENST00000393452 CLDN3O15551 220 aa9.69□□□□□ -0.86
TDP1-202ENST00000393452 TOM1L1O75674 476 aa9.69□□□□□ -0.86
TDP1-202ENST00000393452 SLC26A2P50443 739 aa9.69□□□□□ -0.86
TDP1-202ENST00000393452 GUCY2FP51841 1108 aa9.69□□□□□ -0.86
TDP1-202ENST00000393452 CENPCQ03188 943 aa9.69□□□□□ -0.86
TDP1-202ENST00000393452 GRM1Q13255 1194 aa9.69□□□□□ -0.86
TDP1-202ENST00000393452 BIRC3Q13489 604 aa9.69□□□□□ -0.86
TDP1-202ENST00000393452 CUL2Q13617 745 aa9.69□□□□□ -0.86
TDP1-202ENST00000393452 C9orf131Q5VYM1 1079 aa9.69□□□□□ -0.86
TDP1-202ENST00000393452 SPOPLQ6IQ16 392 aa9.69□□□□□ -0.86
TDP1-202ENST00000393452 MCOLN2Q8IZK6 566 aa9.69□□□□□ -0.86
TDP1-202ENST00000393452 C1orf131Q8NDD1 294 aaKnown RBP9.69□□□□□ -0.86
TDP1-202ENST00000393452 OR5B17Q8NGF7 314 aa9.69□□□□□ -0.86
TDP1-202ENST00000393452 GLG1Q92896 1179 aa9.69□□□□□ -0.86
TDP1-202ENST00000393452 OPTNQ96CV9 577 aa9.69□□□□□ -0.86
TDP1-202ENST00000393452 MMP19Q99542 508 aa9.69□□□□□ -0.86
TDP1-202ENST00000393452 CNOT8Q9UFF9 292 aaKnown RBP9.69□□□□□ -0.86
TDP1-202ENST00000393452 PCDHA3Q9Y5H8 950 aa9.69□□□□□ -0.86
TDP1-202ENST00000393452 GOLGA6CA6NDK9 693 aa9.68□□□□□ -0.86
TDP1-202ENST00000393452 ERICH4A6NGS2 130 aa9.68□□□□□ -0.86
TDP1-202ENST00000393452 TMEM110-MUSTN1A8MSY1 372 aa9.68□□□□□ -0.86
TDP1-202ENST00000393452 CALCAP01258 141 aa9.68□□□□□ -0.86
TDP1-202ENST00000393452 CLTAP09496 248 aa9.68□□□□□ -0.86
TDP1-202ENST00000393452 GOLGA6DP0CG33 693 aa9.68□□□□□ -0.86
TDP1-202ENST00000393452 MYBL1P10243 752 aa9.68□□□□□ -0.86
TDP1-202ENST00000393452 YBX3P16989 372 aaKnown RBP eCLIP9.68□□□□□ -0.86
TDP1-202ENST00000393452 OSBPP22059 807 aa9.68□□□□□ -0.86
TDP1-202ENST00000393452 TBXAS1P24557 533 aaPredicted RBP9.68□□□□□ -0.86
TDP1-202ENST00000393452 AP3M2P53677 418 aa9.68□□□□□ -0.86
TDP1-202ENST00000393452 NOP14P78316 857 aaKnown RBP9.68□□□□□ -0.86
TDP1-202ENST00000393452 LAMTOR4Q0VGL1 99 aa9.68□□□□□ -0.86
TDP1-202ENST00000393452 HLTFQ14527 1009 aaKnown RBP eCLIP9.68□□□□□ -0.86
TDP1-202ENST00000393452 PLCB4Q15147 1175 aa9.68□□□□□ -0.86
TDP1-202ENST00000393452 CFAP58Q5T655 872 aa9.68□□□□□ -0.86
TDP1-202ENST00000393452 LDLRAD1Q5T700 205 aa9.68□□□□□ -0.86
TDP1-202ENST00000393452 DDX42Q86XP3 938 aaKnown RBP eCLIP9.68□□□□□ -0.86
TDP1-202ENST00000393452 TRIM50Q86XT4 487 aa9.68□□□□□ -0.86
TDP1-202ENST00000393452 ZDHHC14Q8IZN3 488 aa9.68□□□□□ -0.86
TDP1-202ENST00000393452 GOLGA6L1Q8N7Z2 621 aa9.68□□□□□ -0.86
TDP1-202ENST00000393452 SHCBP1Q8NEM2 672 aa9.68□□□□□ -0.86
TDP1-202ENST00000393452 ACO2Q99798 780 aaKnown RBP9.68□□□□□ -0.86
TDP1-202ENST00000393452 MRPL4Q9BYD3 311 aaKnown RBP9.68□□□□□ -0.86
TDP1-202ENST00000393452 CELF4Q9BZC1 486 aaKnown RBP9.68□□□□□ -0.86
TDP1-202ENST00000393452 NEUROG2Q9H2A3 272 aa9.68□□□□□ -0.86
TDP1-202ENST00000393452 FAM114A2Q9NRY5 505 aa9.68□□□□□ -0.86
TDP1-202ENST00000393452 GOLGA6AQ9NYA3 693 aa9.68□□□□□ -0.86
TDP1-202ENST00000393452 PCYOX1Q9UHG3 505 aa9.68□□□□□ -0.86
TDP1-202ENST00000393452 UTP11Q9Y3A2 253 aaKnown RBP9.68□□□□□ -0.86
TDP1-202ENST00000393452 ANK1P16157 1881 aa9.68□□□□□ -0.86
TDP1-202ENST00000393452 FAM187AA6NFU0 413 aa9.68□□□□□ -0.86
TDP1-202ENST00000393452 NOP56O00567 594 aaKnown RBP9.68□□□□□ -0.86
TDP1-202ENST00000393452 DAPK3O43293 454 aa9.68□□□□□ -0.86
TDP1-202ENST00000393452 RPS6KA5O75582 802 aa9.68□□□□□ -0.86
TDP1-202ENST00000393452 MARK3P27448 753 aa9.68□□□□□ -0.86
TDP1-202ENST00000393452 EPHX2P34913 555 aa9.68□□□□□ -0.86
TDP1-202ENST00000393452 DRG2P55039 364 aaKnown RBP9.68□□□□□ -0.86
TDP1-202ENST00000393452 MCL1Q07820 350 aa9.68□□□□□ -0.86
TDP1-202ENST00000393452 DHX34Q14147 1143 aaKnown RBP9.68□□□□□ -0.86
TDP1-202ENST00000393452 CYP1B1Q16678 543 aa9.68□□□□□ -0.86
TDP1-202ENST00000393452 TTMPQ5BVD1 217 aa9.68□□□□□ -0.86
TDP1-202ENST00000393452 NAA35Q5VZE5 725 aa9.68□□□□□ -0.86
TDP1-202ENST00000393452 DUPD1Q68J44 220 aa9.68□□□□□ -0.86
TDP1-202ENST00000393452 AADACL2Q6P093 401 aa9.68□□□□□ -0.86
TDP1-202ENST00000393452 MON1BQ7L1V2 547 aa9.68□□□□□ -0.86
TDP1-202ENST00000393452 WDR49Q8IV35 697 aa9.68□□□□□ -0.86
TDP1-202ENST00000393452 EFCAB13Q8IY85 973 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms