RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 PTPN22Q9Y2R2 807 aa17.12■□□□□ 0.33
CNKSR1-202ENST00000374253 SNX24Q9Y343 169 aa17.12■□□□□ 0.33
CNKSR1-202ENST00000374253 A0A0G2JLL6 359 aaPredicted RBP17.12■□□□□ 0.33
CNKSR1-202ENST00000374253 H0YCG3 227 aa17.12■□□□□ 0.33
CNKSR1-202ENST00000374253 KCNJ1P48048 391 aa17.12■□□□□ 0.33
CNKSR1-202ENST00000374253 CUL1Q13616 776 aa17.12■□□□□ 0.33
CNKSR1-202ENST00000374253 TARBP2Q15633 366 aaKnown RBP17.12■□□□□ 0.33
CNKSR1-202ENST00000374253 GJC2Q5T442 439 aaPredicted RBP17.12■□□□□ 0.33
CNKSR1-202ENST00000374253 LRRC31Q6UY01 552 aa17.12■□□□□ 0.33
CNKSR1-202ENST00000374253 PRRT2Q7Z6L0 340 aaPredicted RBP17.12■□□□□ 0.33
CNKSR1-202ENST00000374253 SEPT1Q8WYJ6 367 aa17.12■□□□□ 0.33
CNKSR1-202ENST00000374253 FGD4Q96M96 766 aa17.12■□□□□ 0.33
CNKSR1-202ENST00000374253 AZI2Q9H6S1 392 aa17.12■□□□□ 0.33
CNKSR1-202ENST00000374253 LRRC4CQ9HCJ2 640 aa17.12■□□□□ 0.33
CNKSR1-202ENST00000374253 PDGFCQ9NRA1 345 aa17.12■□□□□ 0.33
CNKSR1-202ENST00000374253 RBPJLQ9UBG7 517 aa17.12■□□□□ 0.33
CNKSR1-202ENST00000374253 TTC7AQ9ULT0 858 aaPredicted RBP17.12■□□□□ 0.33
CNKSR1-202ENST00000374253 NUB1Q9Y5A7 615 aa17.12■□□□□ 0.33
CNKSR1-202ENST00000374253 PCDHB4Q9Y5E5 795 aa17.12■□□□□ 0.33
CNKSR1-202ENST00000374253 A0A0B4J269 797 aa17.11■□□□□ 0.33
CNKSR1-202ENST00000374253 GOLGA6L10A0A0M3HER8 536 aa17.11■□□□□ 0.33
CNKSR1-202ENST00000374253 GOLGA8KD6RF30 607 aa17.11■□□□□ 0.33
CNKSR1-202ENST00000374253 NOP56O00567 594 aaKnown RBP17.11■□□□□ 0.33
CNKSR1-202ENST00000374253 HADHBP55084 474 aaKnown RBP17.11■□□□□ 0.33
CNKSR1-202ENST00000374253 PPFIA1Q13136 1202 aa17.11■□□□□ 0.33
CNKSR1-202ENST00000374253 NEDD9Q14511 834 aa17.11■□□□□ 0.33
CNKSR1-202ENST00000374253 TTC27Q6P3X3 843 aa17.11■□□□□ 0.33
CNKSR1-202ENST00000374253 PRELID2Q8N945 189 aa17.11■□□□□ 0.33
CNKSR1-202ENST00000374253 RNF149Q8NC42 400 aa17.11■□□□□ 0.33
CNKSR1-202ENST00000374253 SOCS7O14512 581 aa17.11■□□□□ 0.33
CNKSR1-202ENST00000374253 CLDN3O15551 220 aa17.11■□□□□ 0.33
CNKSR1-202ENST00000374253 CSDE1O75534 798 aaKnown RBP17.11■□□□□ 0.33
CNKSR1-202ENST00000374253 CST3P01034 146 aaPredicted RBP17.11■□□□□ 0.33
CNKSR1-202ENST00000374253 HSPA9P38646 679 aaKnown RBP17.11■□□□□ 0.33
CNKSR1-202ENST00000374253 MCCD1P59942 119 aaPredicted RBP17.11■□□□□ 0.33
CNKSR1-202ENST00000374253 ZNF394Q53GI3 561 aa17.11■□□□□ 0.33
CNKSR1-202ENST00000374253 METTL7BQ6UX53 244 aa17.11■□□□□ 0.33
CNKSR1-202ENST00000374253 ATP8B4Q8TF62 1192 aa17.11■□□□□ 0.33
CNKSR1-202ENST00000374253 MAGOHBQ96A72 148 aaKnown RBP17.11■□□□□ 0.33
CNKSR1-202ENST00000374253 CDCA5Q96FF9 252 aa17.11■□□□□ 0.33
CNKSR1-202ENST00000374253 C11orf70Q9BRQ4 267 aa17.11■□□□□ 0.33
CNKSR1-202ENST00000374253 STYXL1Q9Y6J8 313 aa17.11■□□□□ 0.33
CNKSR1-202ENST00000374253 DNAH12Q6ZR08 3092 aa17.11■□□□□ 0.33
CNKSR1-202ENST00000374253 O00370 1275 aa17.1■□□□□ 0.33
CNKSR1-202ENST00000374253 ADCY3O60266 1144 aa17.1■□□□□ 0.33
CNKSR1-202ENST00000374253 SCP2P22307 547 aa17.1■□□□□ 0.33
CNKSR1-202ENST00000374253 DHX9Q08211 1270 aaKnown RBP17.1■□□□□ 0.33
CNKSR1-202ENST00000374253 SEL1L2Q5TEA6 688 aa17.1■□□□□ 0.33
CNKSR1-202ENST00000374253 FAM160B1Q5W0V3 765 aa17.1■□□□□ 0.33
CNKSR1-202ENST00000374253 RHPN2Q8IUC4 686 aa17.1■□□□□ 0.33
CNKSR1-202ENST00000374253 MREGQ8N565 214 aa17.1■□□□□ 0.33
CNKSR1-202ENST00000374253 CD101Q93033 1021 aa17.1■□□□□ 0.33
CNKSR1-202ENST00000374253 SBF1O95248 1867 aa17.1■□□□□ 0.33
CNKSR1-202ENST00000374253 CNTNAP2Q9UHC6 1331 aa17.1■□□□□ 0.33
CNKSR1-202ENST00000374253 MIF4GDA9UHW6 222 aaKnown RBP17.1■□□□□ 0.33
CNKSR1-202ENST00000374253 ECM2O94769 699 aaPredicted RBP17.1■□□□□ 0.33
CNKSR1-202ENST00000374253 UNGP13051 313 aaPredicted RBP17.1■□□□□ 0.33
CNKSR1-202ENST00000374253 CD58P19256 250 aa17.1■□□□□ 0.33
CNKSR1-202ENST00000374253 MAPK4P31152 587 aa17.1■□□□□ 0.33
CNKSR1-202ENST00000374253 CTNNA1P35221 906 aaKnown RBP17.1■□□□□ 0.33
CNKSR1-202ENST00000374253 PLTPP55058 493 aa17.1■□□□□ 0.33
CNKSR1-202ENST00000374253 NOP14P78316 857 aaKnown RBP17.1■□□□□ 0.33
CNKSR1-202ENST00000374253 CUL2Q13617 745 aa17.1■□□□□ 0.33
CNKSR1-202ENST00000374253 JAMLQ86YT9 394 aa17.1■□□□□ 0.33
CNKSR1-202ENST00000374253 OPTNQ96CV9 577 aa17.1■□□□□ 0.33
CNKSR1-202ENST00000374253 NLRP4Q96MN2 994 aa17.1■□□□□ 0.33
CNKSR1-202ENST00000374253 GPR20Q99678 358 aa17.1■□□□□ 0.33
CNKSR1-202ENST00000374253 MTMR12Q9C0I1 747 aa17.1■□□□□ 0.33
CNKSR1-202ENST00000374253 KIAA1586Q9HCI6 787 aa17.1■□□□□ 0.33
CNKSR1-202ENST00000374253 ATP8A1Q9Y2Q0 1164 aa17.1■□□□□ 0.33
CNKSR1-202ENST00000374253 MAFO75444 373 aaPredicted RBP17.09■□□□□ 0.33
CNKSR1-202ENST00000374253 CYP2C8P10632 490 aa17.09■□□□□ 0.33
CNKSR1-202ENST00000374253 ACO1P21399 889 aaKnown RBP17.09■□□□□ 0.33
CNKSR1-202ENST00000374253 GJC1P36383 396 aa17.09■□□□□ 0.33
CNKSR1-202ENST00000374253 IGBP1P78318 339 aa17.09■□□□□ 0.33
CNKSR1-202ENST00000374253 CLDN10P78369 228 aa17.09■□□□□ 0.33
CNKSR1-202ENST00000374253 LAMTOR4Q0VGL1 99 aa17.09■□□□□ 0.33
CNKSR1-202ENST00000374253 MKRN3Q13064 507 aaKnown RBP17.09■□□□□ 0.33
CNKSR1-202ENST00000374253 ERO1BQ86YB8 467 aa17.09■□□□□ 0.33
CNKSR1-202ENST00000374253 MCOLN2Q8IZK6 566 aa17.09■□□□□ 0.33
CNKSR1-202ENST00000374253 SPATA33Q96N06 139 aa17.09■□□□□ 0.33
CNKSR1-202ENST00000374253 RPS6KC1Q96S38 1066 aa17.09■□□□□ 0.33
CNKSR1-202ENST00000374253 NAP1L3Q99457 506 aaPredicted RBP17.09■□□□□ 0.33
CNKSR1-202ENST00000374253 BCCIPQ9P287 314 aaKnown RBP eCLIP17.09■□□□□ 0.33
CNKSR1-202ENST00000374253 MROH7Q68CQ1 1323 aa17.09■□□□□ 0.33
CNKSR1-202ENST00000374253 ADGRA2Q96PE1 1338 aa17.09■□□□□ 0.33
CNKSR1-202ENST00000374253 PDCLQ13371 301 aa17.09■□□□□ 0.33
CNKSR1-202ENST00000374253 NCOA4Q13772 614 aa17.09■□□□□ 0.33
CNKSR1-202ENST00000374253 SLFN12LQ6IEE8 588 aa17.09■□□□□ 0.33
CNKSR1-202ENST00000374253 CEP120Q8N960 986 aa17.09■□□□□ 0.33
CNKSR1-202ENST00000374253 FBXO41Q8TF61 875 aa17.09■□□□□ 0.33
CNKSR1-202ENST00000374253 DIS3Q9Y2L1 958 aaKnown RBP17.09■□□□□ 0.33
CNKSR1-202ENST00000374253 PCDHB2Q9Y5E7 798 aa17.09■□□□□ 0.33
CNKSR1-202ENST00000374253 ZBTB42B2RXF5 422 aa17.08■□□□□ 0.33
CNKSR1-202ENST00000374253 BHMG1C9JSJ3 638 aaPredicted RBP17.08■□□□□ 0.33
CNKSR1-202ENST00000374253 B4GALT5O43286 388 aa17.08■□□□□ 0.33
CNKSR1-202ENST00000374253 GNA15P30679 374 aa17.08■□□□□ 0.33
CNKSR1-202ENST00000374253 HPDP32754 393 aaPredicted RBP17.08■□□□□ 0.33
CNKSR1-202ENST00000374253 RFC5P40937 340 aa17.08■□□□□ 0.33
CNKSR1-202ENST00000374253 NSFP46459 744 aaKnown RBP17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms