RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 FAM13AO94988 1023 aa20.65■□□□□ 0.9
TMEM53-201ENST00000372235 FGFR3P22607 806 aa20.65■□□□□ 0.9
TMEM53-201ENST00000372235 MATR3P43243 847 aaKnown RBP eCLIP20.65■□□□□ 0.9
TMEM53-201ENST00000372235 MCL1Q07820 350 aa20.65■□□□□ 0.9
TMEM53-201ENST00000372235 GLRA4Q5JXX5 417 aa20.65■□□□□ 0.9
TMEM53-201ENST00000372235 HAUS6Q7Z4H7 955 aa20.65■□□□□ 0.9
TMEM53-201ENST00000372235 GPBP1Q86WP2 473 aa20.65■□□□□ 0.9
TMEM53-201ENST00000372235 CLSTN3Q9BQT9 956 aa20.65■□□□□ 0.9
TMEM53-201ENST00000372235 BACH2Q9BYV9 841 aa20.65■□□□□ 0.9
TMEM53-201ENST00000372235 ZSCAN16Q9H4T2 348 aaPredicted RBP20.65■□□□□ 0.9
TMEM53-201ENST00000372235 ANKFY1Q9P2R3 1169 aa20.65■□□□□ 0.9
TMEM53-201ENST00000372235 FBXW11Q9UKB1 542 aa20.65■□□□□ 0.9
TMEM53-201ENST00000372235 BACE2Q9Y5Z0 518 aa20.65■□□□□ 0.9
TMEM53-201ENST00000372235 XPOTO43592 962 aaKnown RBP20.64■□□□□ 0.89
TMEM53-201ENST00000372235 XYLBO75191 536 aa20.64■□□□□ 0.89
TMEM53-201ENST00000372235 DDIT3P35638 169 aa20.64■□□□□ 0.89
TMEM53-201ENST00000372235 LIG4P49917 911 aa20.64■□□□□ 0.89
TMEM53-201ENST00000372235 OSTNP61366 133 aa20.64■□□□□ 0.89
TMEM53-201ENST00000372235 TDGQ13569 410 aa20.64■□□□□ 0.89
TMEM53-201ENST00000372235 RAB33AQ14088 237 aa20.64■□□□□ 0.89
TMEM53-201ENST00000372235 PRSS55Q6UWB4 352 aaPredicted RBP20.64■□□□□ 0.89
TMEM53-201ENST00000372235 GLYCTKQ8IVS8 523 aa20.64■□□□□ 0.89
TMEM53-201ENST00000372235 MYCT1Q8N699 235 aa20.64■□□□□ 0.89
TMEM53-201ENST00000372235 KRI1Q8N9T8 703 aaKnown RBP20.64■□□□□ 0.89
TMEM53-201ENST00000372235 LARP4BQ92615 738 aaKnown RBP20.64■□□□□ 0.89
TMEM53-201ENST00000372235 RAD54LQ92698 747 aa20.64■□□□□ 0.89
TMEM53-201ENST00000372235 EPS15L1Q9UBC2 864 aa20.64■□□□□ 0.89
TMEM53-201ENST00000372235 MTRRQ9UBK8 725 aa20.64■□□□□ 0.89
TMEM53-201ENST00000372235 NUB1Q9Y5A7 615 aa20.64■□□□□ 0.89
TMEM53-201ENST00000372235 H7C4K7 107 aa20.63■□□□□ 0.89
TMEM53-201ENST00000372235 PODXLO00592 558 aa20.63■□□□□ 0.89
TMEM53-201ENST00000372235 ABLIM1O14639 778 aa20.63■□□□□ 0.89
TMEM53-201ENST00000372235 SYN3O14994 580 aa20.63■□□□□ 0.89
TMEM53-201ENST00000372235 TRAK2O60296 914 aa20.63■□□□□ 0.89
TMEM53-201ENST00000372235 POU2F2P09086 479 aa20.63■□□□□ 0.89
TMEM53-201ENST00000372235 CLTAP09496 248 aa20.63■□□□□ 0.89
TMEM53-201ENST00000372235 RPL17P18621 184 aaKnown RBP20.63■□□□□ 0.89
TMEM53-201ENST00000372235 GBP2P32456 591 aaPredicted RBP20.63■□□□□ 0.89
TMEM53-201ENST00000372235 ZNF131P52739 623 aa20.63■□□□□ 0.89
TMEM53-201ENST00000372235 ARSHQ5FYA8 562 aa20.63■□□□□ 0.89
TMEM53-201ENST00000372235 PPM1LQ5SGD2 360 aa20.63■□□□□ 0.89
TMEM53-201ENST00000372235 CEP120Q8N960 986 aa20.63■□□□□ 0.89
TMEM53-201ENST00000372235 REEP2Q9BRK0 252 aa20.63■□□□□ 0.89
TMEM53-201ENST00000372235 CACNG4Q9UBN1 327 aa20.63■□□□□ 0.89
TMEM53-201ENST00000372235 STK17AQ9UEE5 414 aa20.63■□□□□ 0.89
TMEM53-201ENST00000372235 MORC2Q9Y6X9 1032 aaPredicted RBP20.63■□□□□ 0.89
TMEM53-201ENST00000372235 DENND4AQ7Z401 1863 aa20.62■□□□□ 0.89
TMEM53-201ENST00000372235 RFPL2O75678 378 aa20.62■□□□□ 0.89
TMEM53-201ENST00000372235 SPATA31D3P0C874 917 aa20.62■□□□□ 0.89
TMEM53-201ENST00000372235 HARSP12081 509 aaKnown RBP20.62■□□□□ 0.89
TMEM53-201ENST00000372235 PLCG1P19174 1290 aa20.62■□□□□ 0.89
TMEM53-201ENST00000372235 SYT1P21579 422 aa20.62■□□□□ 0.89
TMEM53-201ENST00000372235 PAX3P23760 479 aa20.62■□□□□ 0.89
TMEM53-201ENST00000372235 PTPN5P54829 565 aa20.62■□□□□ 0.89
TMEM53-201ENST00000372235 SPATA31D4Q6ZUB0 917 aa20.62■□□□□ 0.89
TMEM53-201ENST00000372235 CD302Q8IX05 232 aa20.62■□□□□ 0.89
TMEM53-201ENST00000372235 OXCT2Q9BYC2 517 aaPredicted RBP20.62■□□□□ 0.89
TMEM53-201ENST00000372235 TBX20Q9UMR3 447 aa20.62■□□□□ 0.89
TMEM53-201ENST00000372235 SRPRBQ9Y5M8 271 aaKnown RBP20.62■□□□□ 0.89
TMEM53-201ENST00000372235 MTCL1Q9Y4B5 1905 aaKnown RBP20.62■□□□□ 0.89
TMEM53-201ENST00000372235 TECTAO75443 2155 aa20.61■□□□□ 0.89
TMEM53-201ENST00000372235 K7ELQ4 463 aaPredicted RBP20.61■□□□□ 0.89
TMEM53-201ENST00000372235 K7ENM7 598 aa20.61■□□□□ 0.89
TMEM53-201ENST00000372235 HNRNPDLO14979 420 aaKnown RBP20.61■□□□□ 0.89
TMEM53-201ENST00000372235 PIGRP01833 764 aa20.61■□□□□ 0.89
TMEM53-201ENST00000372235 C8AP07357 584 aa20.61■□□□□ 0.89
TMEM53-201ENST00000372235 OR1D2P34982 312 aa20.61■□□□□ 0.89
TMEM53-201ENST00000372235 KARSQ15046 597 aaKnown RBP20.61■□□□□ 0.89
TMEM53-201ENST00000372235 APPL2Q8NEU8 664 aa20.61■□□□□ 0.89
TMEM53-201ENST00000372235 ZNF707Q96C28 371 aaPredicted RBP20.61■□□□□ 0.89
TMEM53-201ENST00000372235 CXCL16Q9H2A7 254 aa20.61■□□□□ 0.89
TMEM53-201ENST00000372235 MFSD1Q9H3U5 465 aa20.61■□□□□ 0.89
TMEM53-201ENST00000372235 KCNK12Q9HB15 430 aa20.61■□□□□ 0.89
TMEM53-201ENST00000372235 BLOC1S4Q9NUP1 217 aa20.61■□□□□ 0.89
TMEM53-201ENST00000372235 MAFFQ9ULX9 164 aa20.61■□□□□ 0.89
TMEM53-201ENST00000372235 MYH11P35749 1972 aa20.61■□□□□ 0.89
TMEM53-201ENST00000372235 PLXNA3P51805 1871 aa20.6■□□□□ 0.89
TMEM53-201ENST00000372235 ASGR2P07307 311 aa20.6■□□□□ 0.89
TMEM53-201ENST00000372235 CYP3A5P20815 502 aa20.6■□□□□ 0.89
TMEM53-201ENST00000372235 PPP2R3AQ06190 1150 aa20.6■□□□□ 0.89
TMEM53-201ENST00000372235 DHX8Q14562 1220 aaKnown RBP20.6■□□□□ 0.89
TMEM53-201ENST00000372235 MCM6Q14566 821 aa20.6■□□□□ 0.89
TMEM53-201ENST00000372235 SLFN12LQ6IEE8 588 aa20.6■□□□□ 0.89
TMEM53-201ENST00000372235 ZBTB45Q96K62 511 aaPredicted RBP20.6■□□□□ 0.89
TMEM53-201ENST00000372235 ST6GALNAC4Q9H4F1 302 aa20.6■□□□□ 0.89
TMEM53-201ENST00000372235 ZHX3Q9H4I2 956 aa20.6■□□□□ 0.89
TMEM53-201ENST00000372235 SEL1LQ9UBV2 794 aa20.6■□□□□ 0.89
TMEM53-201ENST00000372235 DUSP12Q9UNI6 340 aa20.6■□□□□ 0.89
TMEM53-201ENST00000372235 NPHP3-ACAD11A0A0J9YXS1 232 aa20.59■□□□□ 0.89
TMEM53-201ENST00000372235 AVPR2P30518 371 aa20.59■□□□□ 0.89
TMEM53-201ENST00000372235 HOXD11P31277 338 aaPredicted RBP20.59■□□□□ 0.89
TMEM53-201ENST00000372235 ELF1P32519 619 aa20.59■□□□□ 0.89
TMEM53-201ENST00000372235 POU5F1Q01860 360 aaKnown RBP20.59■□□□□ 0.89
TMEM53-201ENST00000372235 CACNB1Q02641 598 aaPredicted RBP20.59■□□□□ 0.89
TMEM53-201ENST00000372235 PTPAQ15257 358 aa20.59■□□□□ 0.89
TMEM53-201ENST00000372235 SLC10A6Q3KNW5 377 aa20.59■□□□□ 0.89
TMEM53-201ENST00000372235 AXDND1Q5T1B0 1012 aaPredicted RBP20.59■□□□□ 0.89
TMEM53-201ENST00000372235 RRAGBQ5VZM2 374 aa20.59■□□□□ 0.89
TMEM53-201ENST00000372235 SLC8B1Q6J4K2 584 aa20.59■□□□□ 0.89
TMEM53-201ENST00000372235 CCDC73Q6ZRK6 1079 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms