RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 LOC285556D6RIA3 1793 aa6.32□□□□□ -1.4
RNU4-4P-201ENST00000364588 GPR75-ASB3A0A0A6YYF3 556 aa6.32□□□□□ -1.4
RNU4-4P-201ENST00000364588 LRG1P02750 347 aa6.32□□□□□ -1.4
RNU4-4P-201ENST00000364588 GNAI3P08754 354 aa6.32□□□□□ -1.4
RNU4-4P-201ENST00000364588 CT47B1P0C2W7 299 aaPredicted RBP6.32□□□□□ -1.4
RNU4-4P-201ENST00000364588 RARSP54136 660 aaKnown RBP6.32□□□□□ -1.4
RNU4-4P-201ENST00000364588 RHBDL3P58872 404 aa6.32□□□□□ -1.4
RNU4-4P-201ENST00000364588 SPP2Q13103 211 aa6.32□□□□□ -1.4
RNU4-4P-201ENST00000364588 ADAM9Q13443 819 aa6.32□□□□□ -1.4
RNU4-4P-201ENST00000364588 FIGNQ5HY92 759 aa6.32□□□□□ -1.4
RNU4-4P-201ENST00000364588 LCE1DQ5T752 114 aa6.32□□□□□ -1.4
RNU4-4P-201ENST00000364588 LCE4AQ5TA78 99 aa6.32□□□□□ -1.4
RNU4-4P-201ENST00000364588 UBE2Q1Q7Z7E8 422 aa6.32□□□□□ -1.4
RNU4-4P-201ENST00000364588 FAM124AQ86V42 546 aa6.32□□□□□ -1.4
RNU4-4P-201ENST00000364588 ZNF761Q86XN6 746 aaPredicted RBP6.32□□□□□ -1.4
RNU4-4P-201ENST00000364588 NLGN4XQ8N0W4 816 aa6.32□□□□□ -1.4
RNU4-4P-201ENST00000364588 SPATA5Q8NB90 893 aa6.32□□□□□ -1.4
RNU4-4P-201ENST00000364588 ADAMTS17Q8TE56 1095 aa6.32□□□□□ -1.4
RNU4-4P-201ENST00000364588 U2AF1L4Q8WU68 220 aaKnown RBP6.32□□□□□ -1.4
RNU4-4P-201ENST00000364588 FBXW5Q969U6 566 aa6.32□□□□□ -1.4
RNU4-4P-201ENST00000364588 DEFB118Q96PH6 123 aa6.32□□□□□ -1.4
RNU4-4P-201ENST00000364588 HTATIP2Q9BUP3 242 aa6.32□□□□□ -1.4
RNU4-4P-201ENST00000364588 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.32□□□□□ -1.4
RNU4-4P-201ENST00000364588 RAI14Q9P0K7 980 aa6.32□□□□□ -1.4
RNU4-4P-201ENST00000364588 HMG20BQ9P0W2 317 aa6.32□□□□□ -1.4
RNU4-4P-201ENST00000364588 AGTPBP1Q9UPW5 1226 aa6.32□□□□□ -1.4
RNU4-4P-201ENST00000364588 CDK5RAP2Q96SN8 1893 aa6.32□□□□□ -1.4
RNU4-4P-201ENST00000364588 ALPK3Q96L96 1907 aa6.31□□□□□ -1.4
RNU4-4P-201ENST00000364588 PNMA6EA0A0J9YXQ4 647 aa6.31□□□□□ -1.4
RNU4-4P-201ENST00000364588 SGPL1O95470 568 aa6.31□□□□□ -1.4
RNU4-4P-201ENST00000364588 TFRCP02786 760 aaKnown RBP6.31□□□□□ -1.4
RNU4-4P-201ENST00000364588 LDHCP07864 332 aa6.31□□□□□ -1.4
RNU4-4P-201ENST00000364588 COL6A2P12110 1019 aa6.31□□□□□ -1.4
RNU4-4P-201ENST00000364588 TRIM27P14373 513 aa6.31□□□□□ -1.4
RNU4-4P-201ENST00000364588 MCAMP43121 646 aa6.31□□□□□ -1.4
RNU4-4P-201ENST00000364588 EPHA5P54756 1037 aa6.31□□□□□ -1.4
RNU4-4P-201ENST00000364588 HMGCS2P54868 508 aa6.31□□□□□ -1.4
RNU4-4P-201ENST00000364588 MTX1Q13505 466 aa6.31□□□□□ -1.4
RNU4-4P-201ENST00000364588 RRP1BQ14684 758 aaKnown RBP6.31□□□□□ -1.4
RNU4-4P-201ENST00000364588 BMS1Q14692 1282 aaKnown RBP6.31□□□□□ -1.4
RNU4-4P-201ENST00000364588 GPR19Q15760 415 aa6.31□□□□□ -1.4
RNU4-4P-201ENST00000364588 TRIM61Q5EBN2 209 aa6.31□□□□□ -1.4
RNU4-4P-201ENST00000364588 ZC3H7AQ8IWR0 971 aaKnown RBP6.31□□□□□ -1.4
RNU4-4P-201ENST00000364588 TEX11Q8IYF3 940 aa6.31□□□□□ -1.4
RNU4-4P-201ENST00000364588 ZDHHC14Q8IZN3 488 aa6.31□□□□□ -1.4
RNU4-4P-201ENST00000364588 CXorf38Q8TB03 319 aa6.31□□□□□ -1.4
RNU4-4P-201ENST00000364588 SH3RF3Q8TEJ3 882 aaPredicted RBP6.31□□□□□ -1.4
RNU4-4P-201ENST00000364588 FRAT1Q92837 279 aaPredicted RBP6.31□□□□□ -1.4
RNU4-4P-201ENST00000364588 RELTQ969Z4 430 aa6.31□□□□□ -1.4
RNU4-4P-201ENST00000364588 COA7Q96BR5 231 aa6.31□□□□□ -1.4
RNU4-4P-201ENST00000364588 NSUN4Q96CB9 384 aaKnown RBP6.31□□□□□ -1.4
RNU4-4P-201ENST00000364588 MRFAP1L1Q96HT8 127 aa6.31□□□□□ -1.4
RNU4-4P-201ENST00000364588 MRPL4Q9BYD3 311 aaKnown RBP6.31□□□□□ -1.4
RNU4-4P-201ENST00000364588 OSBPL5Q9H0X9 879 aaPredicted RBP6.31□□□□□ -1.4
RNU4-4P-201ENST00000364588 DLL4Q9NR61 685 aa6.31□□□□□ -1.4
RNU4-4P-201ENST00000364588 NDOR1Q9UHB4 597 aa6.31□□□□□ -1.4
RNU4-4P-201ENST00000364588 SRPK3Q9UPE1 567 aa6.31□□□□□ -1.4
RNU4-4P-201ENST00000364588 SLC45A1Q9Y2W3 748 aa6.31□□□□□ -1.4
RNU4-4P-201ENST00000364588 SIPA1L1O43166 1804 aa6.31□□□□□ -1.4
RNU4-4P-201ENST00000364588 TRIOBPQ9H2D6 2365 aa6.3□□□□□ -1.4
RNU4-4P-201ENST00000364588 NKRFO15226 690 aaKnown RBP eCLIP6.3□□□□□ -1.4
RNU4-4P-201ENST00000364588 NOBOXO60393 691 aa6.3□□□□□ -1.4
RNU4-4P-201ENST00000364588 BCAR3O75815 825 aa6.3□□□□□ -1.4
RNU4-4P-201ENST00000364588 GNAI2P04899 355 aa6.3□□□□□ -1.4
RNU4-4P-201ENST00000364588 FAHP16930 419 aa6.3□□□□□ -1.4
RNU4-4P-201ENST00000364588 ZNF28P17035 718 aa6.3□□□□□ -1.4
RNU4-4P-201ENST00000364588 SYN1P17600 705 aa6.3□□□□□ -1.4
RNU4-4P-201ENST00000364588 GJA4P35212 333 aa6.3□□□□□ -1.4
RNU4-4P-201ENST00000364588 GSTO1P78417 241 aa6.3□□□□□ -1.4
RNU4-4P-201ENST00000364588 G3BP1Q13283 466 aaKnown RBP eCLIP6.3□□□□□ -1.4
RNU4-4P-201ENST00000364588 FAM110CQ1W6H9 321 aa6.3□□□□□ -1.4
RNU4-4P-201ENST00000364588 SHROOM1Q2M3G4 852 aaPredicted RBP6.3□□□□□ -1.4
RNU4-4P-201ENST00000364588 PAN2Q504Q3 1202 aaKnown RBP6.3□□□□□ -1.4
RNU4-4P-201ENST00000364588 PRR31Q5SQ13 230 aa6.3□□□□□ -1.4
RNU4-4P-201ENST00000364588 BORAQ6PGQ7 559 aa6.3□□□□□ -1.4
RNU4-4P-201ENST00000364588 EP400NLQ6ZTU2 488 aa6.3□□□□□ -1.4
RNU4-4P-201ENST00000364588 GSTCDQ8NEC7 633 aa6.3□□□□□ -1.4
RNU4-4P-201ENST00000364588 PCDH19Q8TAB3 1148 aa6.3□□□□□ -1.4
RNU4-4P-201ENST00000364588 DIS3LQ8TF46 1054 aaKnown RBP6.3□□□□□ -1.4
RNU4-4P-201ENST00000364588 ARHGAP45Q92619 1136 aa6.3□□□□□ -1.4
RNU4-4P-201ENST00000364588 C20orf173Q96LM9 149 aa6.3□□□□□ -1.4
RNU4-4P-201ENST00000364588 ZSWIM3Q96MP5 696 aa6.3□□□□□ -1.4
RNU4-4P-201ENST00000364588 NOL10Q9BSC4 688 aaKnown RBP6.3□□□□□ -1.4
RNU4-4P-201ENST00000364588 CATSPERZQ9NTU4 200 aa6.3□□□□□ -1.4
RNU4-4P-201ENST00000364588 AATFQ9NY61 560 aaKnown RBP eCLIP6.3□□□□□ -1.4
RNU4-4P-201ENST00000364588 PCDHA8Q9Y5H6 950 aa6.3□□□□□ -1.4
RNU4-4P-201ENST00000364588 NR2E3Q9Y5X4 410 aa6.3□□□□□ -1.4
RNU4-4P-201ENST00000364588 MAST2Q6P0Q8 1798 aa6.3□□□□□ -1.4
RNU4-4P-201ENST00000364588 CEP290O15078 2479 aa6.3□□□□□ -1.4
RNU4-4P-201ENST00000364588 PLXNB2O15031 1838 aa6.29□□□□□ -1.4
RNU4-4P-201ENST00000364588 FOCADQ5VW36 1801 aa6.29□□□□□ -1.4
RNU4-4P-201ENST00000364588 COL2A1P02458 1487 aaPredicted RBP6.29□□□□□ -1.4
RNU4-4P-201ENST00000364588 C9orf118A6NHY6 69 aa6.29□□□□□ -1.4
RNU4-4P-201ENST00000364588 IPO8O15397 1037 aaKnown RBP6.29□□□□□ -1.4
RNU4-4P-201ENST00000364588 CRTAMO95727 393 aa6.29□□□□□ -1.4
RNU4-4P-201ENST00000364588 UQCRFS1P1P0C7P4 283 aa6.29□□□□□ -1.4
RNU4-4P-201ENST00000364588 GCLCP48506 637 aaPredicted RBP6.29□□□□□ -1.4
RNU4-4P-201ENST00000364588 GRIN1Q05586 938 aa6.29□□□□□ -1.4
RNU4-4P-201ENST00000364588 PABPC4Q13310 644 aaKnown RBP eCLIP6.29□□□□□ -1.4
RNU4-4P-201ENST00000364588 OS9Q13438 667 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms