RNA–Protein interactions for RNA: ENST00000330133.4

MRPL54-201, Transcript of mitochondrial ribosomal protein L54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL54, Length 626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54-201ENST00000330133 PCIF1Q9H4Z3 704 aa20.61■□□□□ 0.89
MRPL54-201ENST00000330133 PRDM6Q9NQX0 595 aa20.61■□□□□ 0.89
MRPL54-201ENST00000330133 PRRC2BQ5JSZ5 2229 aaKnown RBP20.6■□□□□ 0.89
MRPL54-201ENST00000330133 F8W810 466 aa20.6■□□□□ 0.89
MRPL54-201ENST00000330133 KINO60870 393 aaKnown RBP20.6■□□□□ 0.89
MRPL54-201ENST00000330133 RHOBTB3O94955 611 aa20.6■□□□□ 0.89
MRPL54-201ENST00000330133 SOD2P04179 222 aa20.6■□□□□ 0.89
MRPL54-201ENST00000330133 ADRB2P07550 413 aa20.6■□□□□ 0.89
MRPL54-201ENST00000330133 RPL9P32969 192 aaKnown RBP20.6■□□□□ 0.89
MRPL54-201ENST00000330133 NRIP1P48552 1158 aa20.6■□□□□ 0.89
MRPL54-201ENST00000330133 UBE2HP62256 183 aa20.6■□□□□ 0.89
MRPL54-201ENST00000330133 KNOP1Q1ED39 458 aaKnown RBP20.6■□□□□ 0.89
MRPL54-201ENST00000330133 BMT2Q1RMZ1 405 aa20.6■□□□□ 0.89
MRPL54-201ENST00000330133 FUT10Q6P4F1 479 aa20.6■□□□□ 0.89
MRPL54-201ENST00000330133 EP400NLQ6ZTU2 488 aa20.6■□□□□ 0.89
MRPL54-201ENST00000330133 HS2ST1Q7LGA3 356 aa20.6■□□□□ 0.89
MRPL54-201ENST00000330133 NOC3LQ8WTT2 800 aaKnown RBP20.6■□□□□ 0.89
MRPL54-201ENST00000330133 C18orf25Q96B23 403 aaPredicted RBP20.6■□□□□ 0.89
MRPL54-201ENST00000330133 SAAL1Q96ER3 474 aa20.6■□□□□ 0.89
MRPL54-201ENST00000330133 CDCA3Q99618 268 aaPredicted RBP20.6■□□□□ 0.89
MRPL54-201ENST00000330133 CBWD1Q9BRT8 395 aa20.6■□□□□ 0.89
MRPL54-201ENST00000330133 GOLGA2P5Q9HBQ8 144 aa20.6■□□□□ 0.89
MRPL54-201ENST00000330133 THEGQ9P2T0 379 aa20.6■□□□□ 0.89
MRPL54-201ENST00000330133 UBQLN1Q9UMX0 589 aaKnown RBP20.6■□□□□ 0.89
MRPL54-201ENST00000330133 SSX2IPQ9Y2D8 614 aa20.6■□□□□ 0.89
MRPL54-201ENST00000330133 CDH23Q9H251 3354 aa20.59■□□□□ 0.89
MRPL54-201ENST00000330133 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.59■□□□□ 0.89
MRPL54-201ENST00000330133 FSD2A1L4K1 749 aa20.59■□□□□ 0.89
MRPL54-201ENST00000330133 HIDE1A8MVS5 230 aa20.59■□□□□ 0.89
MRPL54-201ENST00000330133 TULP1O00294 542 aaPredicted RBP20.59■□□□□ 0.89
MRPL54-201ENST00000330133 PER2O15055 1255 aa20.59■□□□□ 0.89
MRPL54-201ENST00000330133 EXTL3O43909 919 aa20.59■□□□□ 0.89
MRPL54-201ENST00000330133 PRPF40AO75400 957 aaKnown RBP20.59■□□□□ 0.89
MRPL54-201ENST00000330133 B3GAT3O94766 335 aa20.59■□□□□ 0.89
MRPL54-201ENST00000330133 KIF20AO95235 890 aa20.59■□□□□ 0.89
MRPL54-201ENST00000330133 KIF4AO95239 1232 aa20.59■□□□□ 0.89
MRPL54-201ENST00000330133 IL18RAPO95256 599 aa20.59■□□□□ 0.89
MRPL54-201ENST00000330133 SMC2O95347 1197 aa20.59■□□□□ 0.89
MRPL54-201ENST00000330133 URODP06132 367 aa20.59■□□□□ 0.89
MRPL54-201ENST00000330133 CLCNKBP51801 687 aa20.59■□□□□ 0.89
MRPL54-201ENST00000330133 SOX4Q06945 474 aaPredicted RBP20.59■□□□□ 0.89
MRPL54-201ENST00000330133 SPAG1Q07617 926 aa20.59■□□□□ 0.89
MRPL54-201ENST00000330133 ELAVL2Q12926 359 aaKnown RBP20.59■□□□□ 0.89
MRPL54-201ENST00000330133 PNOCQ13519 176 aa20.59■□□□□ 0.89
MRPL54-201ENST00000330133 KCNB1Q14721 858 aa20.59■□□□□ 0.89
MRPL54-201ENST00000330133 UPP1Q16831 310 aa20.59■□□□□ 0.89
MRPL54-201ENST00000330133 KIAA1841Q6NSI8 718 aa20.59■□□□□ 0.89
MRPL54-201ENST00000330133 CRELD2Q6UXH1 353 aaPredicted RBP20.59■□□□□ 0.89
MRPL54-201ENST00000330133 TAS1R1Q7RTX1 841 aa20.59■□□□□ 0.89
MRPL54-201ENST00000330133 HASPINQ8TF76 798 aa20.59■□□□□ 0.89
MRPL54-201ENST00000330133 AUTS2Q8WXX7 1259 aa20.59■□□□□ 0.89
MRPL54-201ENST00000330133 PABPC5Q96DU9 382 aaKnown RBP20.59■□□□□ 0.89
MRPL54-201ENST00000330133 ASB7Q9H672 318 aa20.59■□□□□ 0.89
MRPL54-201ENST00000330133 MRPL17Q9NRX2 175 aaKnown RBP20.59■□□□□ 0.89
MRPL54-201ENST00000330133 CGNQ9P2M7 1197 aaKnown RBP20.59■□□□□ 0.89
MRPL54-201ENST00000330133 DERAQ9Y315 318 aa20.59■□□□□ 0.89
MRPL54-201ENST00000330133 SF3B1O75533 1304 aaKnown RBP eCLIP20.58■□□□□ 0.89
MRPL54-201ENST00000330133 GOLGA8IPA6NC78 632 aa20.58■□□□□ 0.89
MRPL54-201ENST00000330133 C2orf71A6NGG8 1288 aa20.58■□□□□ 0.89
MRPL54-201ENST00000330133 GOLGA8JA6NMD2 632 aa20.58■□□□□ 0.89
MRPL54-201ENST00000330133 TMEM189-UBE2V1I3L0A0 370 aa20.58■□□□□ 0.89
MRPL54-201ENST00000330133 PODXLO00592 558 aa20.58■□□□□ 0.89
MRPL54-201ENST00000330133 TGFB1I1O43294 461 aa20.58■□□□□ 0.89
MRPL54-201ENST00000330133 CYP3A5P20815 502 aa20.58■□□□□ 0.89
MRPL54-201ENST00000330133 GTF2F1P35269 517 aaKnown RBP eCLIP20.58■□□□□ 0.89
MRPL54-201ENST00000330133 DUSP6Q16828 381 aa20.58■□□□□ 0.89
MRPL54-201ENST00000330133 USP41Q3LFD5 358 aa20.58■□□□□ 0.89
MRPL54-201ENST00000330133 GPD1LQ8N335 351 aa20.58■□□□□ 0.89
MRPL54-201ENST00000330133 KIAA0895Q8NCT3 520 aa20.58■□□□□ 0.89
MRPL54-201ENST00000330133 BEST2Q8NFU1 509 aa20.58■□□□□ 0.89
MRPL54-201ENST00000330133 GPR62Q9BZJ7 368 aa20.58■□□□□ 0.89
MRPL54-201ENST00000330133 UBE2ZQ9H832 354 aaPredicted RBP20.58■□□□□ 0.89
MRPL54-201ENST00000330133 KIAA1586Q9HCI6 787 aa20.58■□□□□ 0.89
MRPL54-201ENST00000330133 AGPAT3Q9NRZ7 376 aa20.58■□□□□ 0.89
MRPL54-201ENST00000330133 RMND1Q9NWS8 449 aa20.58■□□□□ 0.89
MRPL54-201ENST00000330133 CLDND1Q9NY35 253 aa20.58■□□□□ 0.89
MRPL54-201ENST00000330133 IRAK3Q9Y616 596 aa20.58■□□□□ 0.89
MRPL54-201ENST00000330133 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.57■□□□□ 0.88
MRPL54-201ENST00000330133 TRANK1O15050 2925 aa20.57■□□□□ 0.88
MRPL54-201ENST00000330133 CLIC2O15247 247 aa20.57■□□□□ 0.88
MRPL54-201ENST00000330133 TRAPPC3O43617 180 aa20.57■□□□□ 0.88
MRPL54-201ENST00000330133 EFEMP2O95967 443 aa20.57■□□□□ 0.88
MRPL54-201ENST00000330133 GLUD2P49448 558 aa20.57■□□□□ 0.88
MRPL54-201ENST00000330133 ADAM15Q13444 863 aa20.57■□□□□ 0.88
MRPL54-201ENST00000330133 TMEM132DQ14C87 1099 aa20.57■□□□□ 0.88
MRPL54-201ENST00000330133 PTPN14Q15678 1187 aa20.57■□□□□ 0.88
MRPL54-201ENST00000330133 ZBTB6Q15916 424 aa20.57■□□□□ 0.88
MRPL54-201ENST00000330133 JADE1Q6IE81 842 aa20.57■□□□□ 0.88
MRPL54-201ENST00000330133 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.57■□□□□ 0.88
MRPL54-201ENST00000330133 ELOA2Q8IYF1 753 aaPredicted RBP20.57■□□□□ 0.88
MRPL54-201ENST00000330133 RNF168Q8IYW5 571 aaPredicted RBP20.57■□□□□ 0.88
MRPL54-201ENST00000330133 EFHBQ8N7U6 833 aa20.57■□□□□ 0.88
MRPL54-201ENST00000330133 ZSWIM2Q8NEG5 633 aa20.57■□□□□ 0.88
MRPL54-201ENST00000330133 GOLGA5Q8TBA6 731 aa20.57■□□□□ 0.88
MRPL54-201ENST00000330133 SMARCE1Q969G3 411 aa20.57■□□□□ 0.88
MRPL54-201ENST00000330133 EMILIN2Q9BXX0 1053 aa20.57■□□□□ 0.88
MRPL54-201ENST00000330133 PLXNA4Q9HCM2 1894 aa20.57■□□□□ 0.88
MRPL54-201ENST00000330133 HSPBP1Q9NZL4 362 aa20.57■□□□□ 0.88
MRPL54-201ENST00000330133 TUBGCP4Q9UGJ1 667 aa20.57■□□□□ 0.88
MRPL54-201ENST00000330133 ZNF233A6NK53 670 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms