RNA–Protein interactions for RNA: ENSMUST00000216558.1

Ubp1-206, Transcript of Upstream-binding protein 1, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ubp1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-206ENSMUST00000216558 Kcnd2Q9Z0V2 630 aa16.74■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Spata31d1dE9Q5W2 1247 aa16.73■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Oaz1P54369 227 aa16.73■□□□□ 0.27
Ubp1-206ENSMUST00000216558 SobpQ0P5V2 864 aa16.73■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Znhit6Q3UFB2 460 aaKnown RBP16.73■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Fam92bQ3V2J0 292 aa16.73■□□□□ 0.27
Ubp1-206ENSMUST00000216558 LppQ8BFW7 613 aa16.73■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Wdr3Q8BHB4 942 aaKnown RBP16.73■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Znf784Q8BI69 297 aa16.73■□□□□ 0.27
Ubp1-206ENSMUST00000216558 4933409G03RikQ8C5U0 320 aa16.73■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Cog3Q8CI04 820 aa16.73■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Trpc3Q9QZC1 836 aa16.73■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Spint1Q9R097 507 aa16.73■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Gm4846B2RWH8 538 aa16.72■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Gm2030D3Z7C4 212 aa16.72■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Gm8909G3UXE9 396 aa16.72■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Sept4P28661 478 aa16.72■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Cyp2c39P56656 490 aa16.72■□□□□ 0.27
Ubp1-206ENSMUST00000216558 HmmrQ00547 794 aaKnown RBP16.72■□□□□ 0.27
Ubp1-206ENSMUST00000216558 PrkczQ02956 592 aa16.72■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Cntnap5bQ0V8T8 1292 aa16.72■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Hace1Q3U0D9 909 aa16.72■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Upf3bQ3ULL6 472 aa16.72■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Mfhas1Q3V1N1 1048 aa16.72■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Klra5Q60652 266 aa16.72■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Klhl17Q6TDP3 640 aa16.72■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Znf12Q7TSI0 686 aa16.72■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Phka2Q8BWJ3 1235 aa16.72■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Elmo3Q8BYZ7 720 aa16.72■□□□□ 0.27
Ubp1-206ENSMUST00000216558 H6pdQ8CFX1 789 aa16.72■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Tdrd7Q8K1H1 1086 aaKnown RBP16.72■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Kct2Q8K201 259 aa16.72■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Tbc1d13Q8R3D1 400 aa16.72■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Map4k3Q99JP0 894 aa16.72■□□□□ 0.27
Ubp1-206ENSMUST00000216558 CalcbQ99MP3 130 aa16.72■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Rnf225Q9D7D1 332 aa16.72■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Rnf138rt1Q9D9M9 248 aa16.72■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Zfyve19Q9DAZ9 389 aa16.72■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Mta2Q9R190 668 aa16.72■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Tjp2Q9Z0U1 1167 aaKnown RBP16.72■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Krt28A6BLY7 462 aa16.71■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Vmn2r77L7N2B7 854 aa16.71■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Cpsf2O35218 782 aaKnown RBP16.71■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Enc1O35709 589 aa16.71■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Rps6ka1P18653 724 aa16.71■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Lmnb2P21619 596 aaKnown RBP16.71■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Mgat1P27808 447 aa16.71■□□□□ 0.27
Ubp1-206ENSMUST00000216558 VegfbP49766 207 aa16.71■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Spink5Q148R4 1017 aa16.71■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Cyp3a16Q64481 504 aa16.71■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Trim37Q6PCX9 961 aa16.71■□□□□ 0.27
Ubp1-206ENSMUST00000216558 R3hdm2Q80TM6 1044 aaKnown RBP16.71■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Slc20a2Q80UP8 656 aa16.71■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Efl1Q8C0D5 1127 aa16.71■□□□□ 0.27
Ubp1-206ENSMUST00000216558 TxlnbQ8VBT1 685 aa16.71■□□□□ 0.27
Ubp1-206ENSMUST00000216558 BbxQ8VBW5 907 aa16.71■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Fam133bQ9CVI2 245 aaKnown RBP16.71■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Cd97Q9Z0M6 818 aa16.71■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Zc3h4Q6ZPZ3 1304 aaKnown RBP16.71■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Gucy2dA0A0U1RPR8 1117 aa16.7■□□□□ 0.26
Ubp1-206ENSMUST00000216558 Dpy19l4A2AJQ3 722 aa16.7■□□□□ 0.26
Ubp1-206ENSMUST00000216558 Ptchd4B9EKX1 904 aa16.7■□□□□ 0.26
Ubp1-206ENSMUST00000216558 Dync1i1O88485 628 aa16.7■□□□□ 0.26
Ubp1-206ENSMUST00000216558 Ass1P16460 412 aa16.7■□□□□ 0.26
Ubp1-206ENSMUST00000216558 Serpinh1P19324 417 aaKnown RBP16.7■□□□□ 0.26
Ubp1-206ENSMUST00000216558 Mmp3P28862 477 aa16.7■□□□□ 0.26
Ubp1-206ENSMUST00000216558 Capza3P70190 299 aa16.7■□□□□ 0.26
Ubp1-206ENSMUST00000216558 Rad54lP70270 747 aa16.7■□□□□ 0.26
Ubp1-206ENSMUST00000216558 ItpripQ3TNL8 555 aa16.7■□□□□ 0.26
Ubp1-206ENSMUST00000216558 LbrQ3U9G9 626 aaKnown RBP16.7■□□□□ 0.26
Ubp1-206ENSMUST00000216558 Ppp1r12cQ3UMT1 782 aa16.7■□□□□ 0.26
Ubp1-206ENSMUST00000216558 Q66JV7 365 aa16.7■□□□□ 0.26
Ubp1-206ENSMUST00000216558 D630039A03RikQ8K0M7 236 aa16.7■□□□□ 0.26
Ubp1-206ENSMUST00000216558 Vmn1r203Q8R273 311 aa16.7■□□□□ 0.26
Ubp1-206ENSMUST00000216558 Ubxn1Q922Y1 297 aa16.7■□□□□ 0.26
Ubp1-206ENSMUST00000216558 Slc16a6B1AT66 607 aa16.7■□□□□ 0.26
Ubp1-206ENSMUST00000216558 Mroh9G5E8L9 891 aa16.7■□□□□ 0.26
Ubp1-206ENSMUST00000216558 Mdh1P14152 334 aa16.7■□□□□ 0.26
Ubp1-206ENSMUST00000216558 Sh3bp2Q06649 559 aa16.7■□□□□ 0.26
Ubp1-206ENSMUST00000216558 Ccdc125Q5U465 500 aa16.7■□□□□ 0.26
Ubp1-206ENSMUST00000216558 Gja3Q64448 417 aa16.7■□□□□ 0.26
Ubp1-206ENSMUST00000216558 SugctQ7TNE1 436 aa16.7■□□□□ 0.26
Ubp1-206ENSMUST00000216558 Cfap100Q80VN0 613 aa16.7■□□□□ 0.26
Ubp1-206ENSMUST00000216558 Rnaseh2bQ80ZV0 308 aa16.7■□□□□ 0.26
Ubp1-206ENSMUST00000216558 DcakdQ8BHC4 231 aaKnown RBP16.7■□□□□ 0.26
Ubp1-206ENSMUST00000216558 Snx17Q8BVL3 470 aa16.7■□□□□ 0.26
Ubp1-206ENSMUST00000216558 Adgrg3Q8R0T6 542 aa16.7■□□□□ 0.26
Ubp1-206ENSMUST00000216558 Golph3Q9CRA5 298 aa16.7■□□□□ 0.26
Ubp1-206ENSMUST00000216558 Ccdc91Q9D8L5 442 aa16.7■□□□□ 0.26
Ubp1-206ENSMUST00000216558 Chst7Q9EP78 484 aa16.7■□□□□ 0.26
Ubp1-206ENSMUST00000216558 Ralgps2Q9ERD6 590 aa16.7■□□□□ 0.26
Ubp1-206ENSMUST00000216558 Rab27aQ9ERI2 221 aa16.7■□□□□ 0.26
Ubp1-206ENSMUST00000216558 Dnajc12Q9R022 198 aa16.7■□□□□ 0.26
Ubp1-206ENSMUST00000216558 Atp6v0a1Q9Z1G4 839 aaKnown RBP16.7■□□□□ 0.26
Ubp1-206ENSMUST00000216558 Slc6a21A0A1B0GSD2 748 aa16.69■□□□□ 0.26
Ubp1-206ENSMUST00000216558 RarbP22605 482 aa16.69■□□□□ 0.26
Ubp1-206ENSMUST00000216558 Tbxas1P36423 533 aa16.69■□□□□ 0.26
Ubp1-206ENSMUST00000216558 Tulp2P46686 562 aa16.69■□□□□ 0.26
Ubp1-206ENSMUST00000216558 Rhox5P52651 210 aa16.69■□□□□ 0.26
Ubp1-206ENSMUST00000216558 Zbtb8osQ505B7 168 aa16.69■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 26.4 ms