Protein–RNA interactions for Protein: A0A1B0GSD2

Slc6a21, Transporter, mousemouse

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a21A0A1B0GSD2 Gm25239-201ENSMUST00000174915 86 ntBASIC43.44■■■■■ 4.54
Slc6a21A0A1B0GSD2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC40.29■■■■■ 4.04
Slc6a21A0A1B0GSD2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC39.73■■■■□ 3.95
Slc6a21A0A1B0GSD2 Gm24109-201ENSMUST00000175489 103 ntBASIC37.74■■■■□ 3.63
Slc6a21A0A1B0GSD2 Gm15042-201ENSMUST00000120212 883 ntBASIC37.7■■■■□ 3.63
Slc6a21A0A1B0GSD2 Gm15045-201ENSMUST00000117359 883 ntBASIC36.82■■■■□ 3.48
Slc6a21A0A1B0GSD2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC36.71■■■■□ 3.47
Slc6a21A0A1B0GSD2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC36.7■■■■□ 3.47
Slc6a21A0A1B0GSD2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC36.59■■■■□ 3.45
Slc6a21A0A1B0GSD2 Gm23366-201ENSMUST00000175022 89 ntBASIC36.26■■■■□ 3.4
Slc6a21A0A1B0GSD2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC36.06■■■■□ 3.36
Slc6a21A0A1B0GSD2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.82■■■■□ 3.33
Slc6a21A0A1B0GSD2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
Slc6a21A0A1B0GSD2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC35.33■■■■□ 3.25
Slc6a21A0A1B0GSD2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
Slc6a21A0A1B0GSD2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC35.01■■■■□ 3.2
Slc6a21A0A1B0GSD2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC34.96■■■■□ 3.19
Slc6a21A0A1B0GSD2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC34.92■■■■□ 3.18
Slc6a21A0A1B0GSD2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
Slc6a21A0A1B0GSD2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.74■■■■□ 3.15
Slc6a21A0A1B0GSD2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
Slc6a21A0A1B0GSD2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
Slc6a21A0A1B0GSD2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34.48■■■■□ 3.11
Slc6a21A0A1B0GSD2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
Slc6a21A0A1B0GSD2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC34.4■■■■□ 3.1
Slc6a21A0A1B0GSD2 Gm25238-201ENSMUST00000174914 89 ntBASIC34.39■■■■□ 3.1
Slc6a21A0A1B0GSD2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.29■■■■□ 3.08
Slc6a21A0A1B0GSD2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
Slc6a21A0A1B0GSD2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
Slc6a21A0A1B0GSD2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC34.08■■■■□ 3.05
Slc6a21A0A1B0GSD2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.9■■■■□ 3.02
Slc6a21A0A1B0GSD2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.88■■■■□ 3.01
Slc6a21A0A1B0GSD2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC33.68■■■□□ 2.98
Slc6a21A0A1B0GSD2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.65■■■□□ 2.98
Slc6a21A0A1B0GSD2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
Slc6a21A0A1B0GSD2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC33.49■■■□□ 2.95
Slc6a21A0A1B0GSD2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC33.37■■■□□ 2.93
Slc6a21A0A1B0GSD2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC33.36■■■□□ 2.93
Slc6a21A0A1B0GSD2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
Slc6a21A0A1B0GSD2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.31■■■□□ 2.92
Slc6a21A0A1B0GSD2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC33.28■■■□□ 2.92
Slc6a21A0A1B0GSD2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.16■■■□□ 2.9
Slc6a21A0A1B0GSD2 Gm25262-201ENSMUST00000174934 133 ntBASIC33.08■■■□□ 2.89
Slc6a21A0A1B0GSD2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC33.02■■■□□ 2.88
Slc6a21A0A1B0GSD2 Gm27325-201ENSMUST00000175467 74 ntBASIC33.01■■■□□ 2.87
Slc6a21A0A1B0GSD2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.93■■■□□ 2.86
Slc6a21A0A1B0GSD2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Slc6a21A0A1B0GSD2 Psd-208ENSMUST00000224556 2034 ntBASIC32.78■■■□□ 2.84
Slc6a21A0A1B0GSD2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Slc6a21A0A1B0GSD2 Rab21-202ENSMUST00000218831 843 ntBASIC32.58■■■□□ 2.81
Slc6a21A0A1B0GSD2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC32.57■■■□□ 2.8
Slc6a21A0A1B0GSD2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.53■■■□□ 2.8
Slc6a21A0A1B0GSD2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32.52■■■□□ 2.8
Slc6a21A0A1B0GSD2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Slc6a21A0A1B0GSD2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC32.46■■■□□ 2.79
Slc6a21A0A1B0GSD2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC32.4■■■□□ 2.78
Slc6a21A0A1B0GSD2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC32.37■■■□□ 2.77
Slc6a21A0A1B0GSD2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
Slc6a21A0A1B0GSD2 Gm26115-201ENSMUST00000175605 87 ntBASIC32.36■■■□□ 2.77
Slc6a21A0A1B0GSD2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.31■■■□□ 2.76
Slc6a21A0A1B0GSD2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC32.21■■■□□ 2.75
Slc6a21A0A1B0GSD2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
Slc6a21A0A1B0GSD2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Slc6a21A0A1B0GSD2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
Slc6a21A0A1B0GSD2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Slc6a21A0A1B0GSD2 Gm8109-201ENSMUST00000194076 746 ntBASIC32.13■■■□□ 2.73
Slc6a21A0A1B0GSD2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC32.12■■■□□ 2.73
Slc6a21A0A1B0GSD2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC32.11■■■□□ 2.73
Slc6a21A0A1B0GSD2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.1■■■□□ 2.73
Slc6a21A0A1B0GSD2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Slc6a21A0A1B0GSD2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Slc6a21A0A1B0GSD2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC31.97■■■□□ 2.71
Slc6a21A0A1B0GSD2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.94■■■□□ 2.7
Slc6a21A0A1B0GSD2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
Slc6a21A0A1B0GSD2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.91■■■□□ 2.7
Slc6a21A0A1B0GSD2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Slc6a21A0A1B0GSD2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31.87■■■□□ 2.69
Slc6a21A0A1B0GSD2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Slc6a21A0A1B0GSD2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
Slc6a21A0A1B0GSD2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.69■■■□□ 2.66
Slc6a21A0A1B0GSD2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Slc6a21A0A1B0GSD2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
Slc6a21A0A1B0GSD2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Slc6a21A0A1B0GSD2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.61■■■□□ 2.65
Slc6a21A0A1B0GSD2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
Slc6a21A0A1B0GSD2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
Slc6a21A0A1B0GSD2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31.54■■■□□ 2.64
Slc6a21A0A1B0GSD2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Slc6a21A0A1B0GSD2 Gm17082-201ENSMUST00000166043 1091 ntBASIC31.44■■■□□ 2.62
Slc6a21A0A1B0GSD2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC31.43■■■□□ 2.62
Slc6a21A0A1B0GSD2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Slc6a21A0A1B0GSD2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.37■■■□□ 2.61
Slc6a21A0A1B0GSD2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC31.36■■■□□ 2.61
Slc6a21A0A1B0GSD2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC31.34■■■□□ 2.61
Slc6a21A0A1B0GSD2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Slc6a21A0A1B0GSD2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Slc6a21A0A1B0GSD2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC31.24■■■□□ 2.59
Slc6a21A0A1B0GSD2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Slc6a21A0A1B0GSD2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC31.22■■■□□ 2.59
Slc6a21A0A1B0GSD2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Retrieved 100 of 76,532 protein–RNA pairs in 221.8 ms